CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34720	Sorghum	cytosol	31.42	31.15
Os12t0552900-01	Rice	cytosol	44.44	27.89
Os12t0516300-01	Rice	cytosol	44.44	27.53
Os12t0553200-01	Rice	nucleus	38.54	27.11
OQU84068	Sorghum	golgi, plasma membrane, vacuole	29.86	24.86
OQU84064	Sorghum	cytosol	30.21	23.39
OQU84063	Sorghum	cytosol	33.85	21.29
OQU83293	Sorghum	extracellular, plasma membrane	33.51	20.93
KXG28972	Sorghum	cytosol	32.64	20.68
OQU84059	Sorghum	cytosol	32.81	20.54
OQU78620	Sorghum	cytosol	32.64	20.24
KXG24016	Sorghum	cytosol	32.29	19.56
EES09013	Sorghum	cytosol	31.08	19.44
KXG28969	Sorghum	endoplasmic reticulum, plasma membrane	29.69	19.0
OQU84069	Sorghum	cytosol	30.38	18.9
OQU84066	Sorghum	cytosol	30.38	18.9
EES10297	Sorghum	cytosol	32.12	18.84
OQU83886	Sorghum	cytosol	29.69	18.73
OQU84065	Sorghum	cytosol	23.09	18.63
EES09021	Sorghum	cytosol	23.44	18.59
OQU83095	Sorghum	cytosol	31.42	18.53
KXG28412	Sorghum	cytosol	34.55	18.46
KXG20043	Sorghum	cytosol	30.21	18.45
EES08935	Sorghum	cytosol	31.6	18.44
OQU83506	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	28.3	18.44
OQU83875	Sorghum	vacuole	26.56	17.89
KXG21016	Sorghum	cytosol	27.26	17.64
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	29.69	14.74
OQU77456	Sorghum	cytosol	30.03	13.4
EES19053	Sorghum	cytosol	31.08	13.07
OQU88733	Sorghum	cytosol	2.43	4.88
OQU84067	Sorghum	cytosol	2.78	3.64
Os12t0553600-01	Rice	cytosol	0.69	2.52

Protein Annotations

EnsemblPlants:KXG34721	EnsemblPlantsGene:SORBI_3002G081800	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF40
PFAM:PF00931	ProteinID:KXG34721	ProteinID:KXG34721.1	ProteinID:OQU88731.1	SEG:seg	SUPFAM:SSF52058
UniParc:UPI00081AE3A9	UniProt:A0A1B6QA07	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:8673405..8677183

Molecular Weight (calculated)

65436.1 Da

IEP (calculated)

8.095

GRAVY (calculated)

-0.095

Length

576 amino acids

Sequence
(BLAST)

001: MHLEEWERVN KSIGSGLLGH SLDGNKMRKI LSLSYNDLPF HLKTCLLSLS KYPEDQLIRK DVLVWSWIAE GFIKHEETQG PAWKSLLEIA ESYFNDLINR
101: SLIQPAQSHA PSEQDGQVHY CQVHDMVLEL INHLSAEEGF VTVLSEDGQQ AGTLTSAMQK RKIRRLSLHN NSTGSYGASP EAEKEQLSKV RSLDIFGKVT
201: LIPPLSIFGV LRVLQVDDCS GLDNHHLNDL GKLRLLRFLR LHDLKIVKLP KSIGELESLE TLDIRKQVSM LRPRRMVLPV SFAKLRKLVR LLANGVELPN
301: GLTLKNMTSL REIVGIQVTL HAVTELGKLG ELKVLGLYVP RPNESSSDRG WYVTSLMMEH GMRLPPSVNE WIVKCLQLCP SLQIFILEAP HFCRYPVDLM
401: AQFPSGLRTF ICHGGYFEKA FPKWTKPQLS YLTVLHLSLH TVCVLPEHIE QLAELPSLCF LMINSVCQSY RVQETLSSSS GFPCLTYLDL WSPKLFLKFQ
501: QGAMPKLQKL RLTFSPKFTF DEYNVFDYGL ENLPSLRHVI IQLMGSGRTI MEMDDAIRKA VNDHPNHPSL DLLTKI

Best Arabidopsis Sequence Match ( AT1G58410.1 )
(BLAST)

001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS

Arabidopsis Description

RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.