CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84064	Sorghum	cytosol	95.23	88.58
EES09013	Sorghum	cytosol	96.1	72.2
OQU84069	Sorghum	cytosol	70.38	52.59
OQU84066	Sorghum	cytosol	70.23	52.48
OQU84065	Sorghum	cytosol	49.86	48.32
EES09021	Sorghum	cytosol	50.58	48.21
OQU84059	Sorghum	cytosol	52.17	39.24
OQU84063	Sorghum	cytosol	51.88	39.19
Os09t0357400-00	Rice	mitochondrion, plastid	26.3	37.3
OQU84067	Sorghum	cytosol	19.22	30.3
KXG34721	Sorghum	cytosol, nucleus, peroxisome	24.86	29.86
TraesCS3D01G460000.1	Wheat	cytosol	24.57	28.91
HORVU3Hr1G099360.5	Barley	cytosol	41.19	28.36
OQU83886	Sorghum	cytosol	37.28	28.26
KXG28969	Sorghum	endoplasmic reticulum, plasma membrane	36.56	28.11
KXG28972	Sorghum	cytosol	36.13	27.5
OQU78620	Sorghum	cytosol	36.13	26.91
TraesCS3D01G021900.1	Wheat	cytosol	19.65	26.77
KXG34720	Sorghum	cytosol	22.25	26.51
KXG24016	Sorghum	cytosol	35.84	26.08
OQU83875	Sorghum	vacuole	31.79	25.73
TraesCS1D01G006800.1	Wheat	cytosol	34.54	24.74
KXG20043	Sorghum	cytosol	33.67	24.71
OQU83095	Sorghum	cytosol	33.96	24.05
KXG21016	Sorghum	cytosol	30.64	23.82
OQU83506	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	30.2	23.64
OQU83293	Sorghum	extracellular, plasma membrane	30.78	23.1
EES10297	Sorghum	cytosol	32.51	22.91
EES08935	Sorghum	cytosol	31.36	21.99
KXG28412	Sorghum	cytosol	34.1	21.89
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	32.08	19.14
OQU77456	Sorghum	cytosol	32.23	17.27
EES19053	Sorghum	cytosol	31.79	16.06
Zm00001d037650_P002	Maize	extracellular, plasma membrane	33.81	14.09
OQU88733	Sorghum	cytosol	1.88	4.53

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1Z5RK07	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	EnsemblPlants:OQU84068
ProteinID:OQU84068	ProteinID:OQU84068.1	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43889
PANTHER:PTHR43889:SF25	EnsemblPlantsGene:SORBI_3005G223850	SUPFAM:SSF52058	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000B8BB06D

Description

hypothetical protein

Coordinates

chr5:+:71036407..71038485

Molecular Weight (calculated)

78595.0 Da

IEP (calculated)

7.570

GRAVY (calculated)

0.041

Length

692 amino acids

Sequence
(BLAST)

001: MKLFQLYAKH VLTFLAVLPS YAYIYCISSL YMLIMTLLPQ TYRYLIVIDD IWDTKPWEMI RCALPENGQK SRVLTTTRII DVAEHVGGCY RMKHLTDKSS
101: KILFYGRIFG SIGNCPQQFS DISEKVLKKC GGVPLAIVTI SSLLANKTRS INEWSNVCDA IGAGVGNNPG MDNMRKILLL SYYDLTPQLK TCLLYLSIFP
201: EDYEFRKTTL ILRWIAEGFV QLEDGRQSLF EVGQSYYHEL LNRCLIQPGD SEGDDLSPLR CRVHDMVLDL ICSLSRDESF ATTVYGDCRQ ITSSENKVRR
301: LSIHNASWPT MNMSKLRSLT ISNSAIINSM PPFLCYHLLR VLDFEKCNLK DHTSLEFLCK LFHLRFLSLV DTGYAGEVPR EIGNLQFLQT FYFSGTYIKQ
401: VPLSILGMRQ LMCLAVGMNT RLPTSGLRNL SSLELLRMNV DSAYIAEELG HLTQLRVLMV VLRKDKEGRW DERICRVLVG SLSKLHKIQT LQVEISDDVE
501: VHLEGSVDSP WNLSHLVIFG TSRLPTWIDH TSFQLLSQLC IKVGQVGRED IHVLGRLKAL RVLHLGMVGA KQVFERFMIS ADAFPCVTRC VFSGFSTVPS
601: MFPPGAMPSL QRFCFDIRLE DFGDDSGFTV DDLALCHLPS LQRVWVCLDG ERARDIKDVA MKALTKEAHA HPNHPDIDVG INGQWSQLCR YI

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.