CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G057600.1	Wheat	cytosol	61.78	61.55
TraesCS2B01G071200.1	Wheat	cytosol	37.57	61.27
HORVU2Hr1G012010.2	Barley	cytosol	60.76	60.54
TraesCS2B01G070900.1	Wheat	cytosol	59.83	57.49
OQU83293	Sorghum	extracellular, plasma membrane	37.48	43.82
KXG28969	Sorghum	endoplasmic reticulum, plasma membrane	35.44	42.44
KXG28972	Sorghum	cytosol	35.44	42.02
OQU84065	Sorghum	cytosol	27.83	42.02
EES09021	Sorghum	cytosol	28.01	41.6
OQU83875	Sorghum	vacuole	32.84	41.4
OQU78620	Sorghum	cytosol	35.44	41.12
OQU88733	Sorghum	cytosol	10.95	41.12
OQU83506	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	33.58	40.95
OQU83886	Sorghum	cytosol	34.32	40.53
OQU84067	Sorghum	cytosol	16.42	40.32
KXG24016	Sorghum	cytosol	34.88	39.54
OQU84059	Sorghum	cytosol	33.3	39.02
OQU84063	Sorghum	cytosol	32.93	38.76
KXG34720	Sorghum	cytosol	20.78	38.55
OQU84069	Sorghum	cytosol	32.19	37.47
OQU84066	Sorghum	cytosol	32.0	37.26
OQU83095	Sorghum	cytosol	33.67	37.15
EES09013	Sorghum	cytosol	30.98	36.26
OQU84064	Sorghum	cytosol	24.21	35.08
KXG21016	Sorghum	cytosol	28.85	34.94
KXG20043	Sorghum	cytosol	30.43	34.78
KXG34721	Sorghum	cytosol, nucleus, peroxisome	18.46	34.55
EES10297	Sorghum	cytosol	31.08	34.11
OQU84068	Sorghum	golgi, plasma membrane, vacuole	21.89	34.1
EES08935	Sorghum	cytosol	30.61	33.43
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	31.45	29.22
OQU77456	Sorghum	cytosol	30.7	25.64
EES19053	Sorghum	cytosol	32.37	25.47

Protein Annotations

Gene3D:2.100.10.30	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1B6PRW1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246	GO:GO:0043531	InterPro:IPR001229
InterPro:IPR032675	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	EnsemblPlants:KXG28412
ProteinID:KXG28412	ProteinID:KXG28412.1	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PFAM:PF01419	PRINTS:PR00364	PFscan:PS51752	PANTHER:PTHR43889	PANTHER:PTHR43889:SF18	InterPro:RX-like_CC
SMART:SM00915	EnsemblPlantsGene:SORBI_3005G119400	SUPFAM:SSF51101	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI00081ADEE4
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:52025115..52029672

Molecular Weight (calculated)

121433.0 Da

IEP (calculated)

6.648

GRAVY (calculated)

-0.110

Length

1078 amino acids

Sequence
(BLAST)

0001: MEIATGVMSS LLLKMAELLT DEYSLQRGLR GEVMFLKAEL ESMQAAMERV SEAPVNDNQV NIWASEVREL SYDIEDSIDQ FMVRVHVHPS TTPEGFKGFI
0101: ARSLRLLAEV KTRHQIATEI RDMRTLVKEV ADRRNRYKVD SSVTTASTAP EIDHRLHGIY EESAKLVAIS GPREDLAELL MVREGASKKL KVISIVGVGG
0201: LGKTTLANVM YRQLRGQFEC SAFVPVSLKP DLKRILCSIL RQVSEQIYTN IETWDVVEII NKIRQVLEYK RYFIIVDDIW DESAWNLIND ALVDNNCGSR
0301: VITTTRVAGV AASCCSLNGG TVYKLKPLSH DYSKKLFYER IFGHEDSCYP ELKEISEKIL RKCYGVPLAI ITIASLLANK PRNINQWDIV HSSIGSGTEK
0401: FPSIESMRQI LSISYYDLPS HLKPCLLYLS IFPEDYTILT DQLIRRWISE GFIHGNDVET LHNLGHHYFS ELINRSLIQP EHINTRGMVE ACHVHDMVLD
0501: LITSLSTKEN FVITSHGLKL AHLPKRIRRF SLHNNSNEEL TRTEVTINLS HTRSLIVFPG AVSLMSPLSS FQVLRVLDLE GCRDLQNQIS SVGSLLHLRY
0601: LGLRDTSITN LPKGLENLNY LQTLDLKQTS ISHLPSTVVQ LRRLMHLYIE PSVLLPPGIG NMESLQLLTS VSVSSCANFT KELGSLTELR VLHISLDGTL
0701: HESHKNPLVD SLCNLKKIQE LHIDSTGISN EFVVDLAWFP QYLKSFLGRV PRLPRWMSPL LSDLTTLVIT LDMIQQEDFQ NLGGLPFLQF LCLTVDSAEE
0801: RIITSTDQGK FHSLSEFHFH NDKMGLIFAQ GSMQNLKTLE VTFRVRERKD AYGDFDFGLE NLSVKHVIAR IRCTGSTVCE VEDADLALRK AIDLNPNHPK
0901: LEVIRYYEDE MLEDGQHWGK TLVEEDNEKV VLQRRGPWGG DRGSTRDIMV APQSLKSVKI CSAAVVDAIS FSYLDRYGRE HSMPFWGGVG GMIRTIDLAP
1001: SEYVKEVSGT YGLCSPHPDV VITSLTLVTN LCSYGPFGQP TGTPFHTRVD KTASIVGFFG RSGIYLDAIG VYVRPSKS

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.