CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84065	Sorghum	cytosol	93.39	57.42
EES09021	Sorghum	cytosol	88.84	53.72
OQU88733	Sorghum	cytosol	30.75	47.04
OQU84066	Sorghum	cytosol	94.08	44.6
OQU84069	Sorghum	cytosol	94.08	44.6
TraesCS3D01G021900.1	Wheat	cytosol	49.89	43.11
EES09013	Sorghum	cytosol	81.55	38.87
TraesCS3D01G460000.1	Wheat	cytosol	48.97	36.56
OQU84064	Sorghum	cytosol	44.42	26.21
Os09t0357400-00	Rice	mitochondrion, plastid	28.25	25.41
OQU84063	Sorghum	cytosol	52.16	25.0
OQU83875	Sorghum	vacuole	46.24	23.74
OQU84059	Sorghum	cytosol	49.66	23.7
KXG28972	Sorghum	cytosol	46.01	22.22
HORVU3Hr1G099360.5	Barley	cytosol	50.57	22.09
KXG28969	Sorghum	endoplasmic reticulum, plasma membrane	44.87	21.89
OQU83886	Sorghum	cytosol	45.1	21.69
OQU78620	Sorghum	cytosol	44.87	21.21
KXG34720	Sorghum	cytosol	27.56	20.83
TraesCS1D01G006800.1	Wheat	cytosol	44.87	20.39
OQU83506	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	41.0	20.36
KXG24016	Sorghum	cytosol	43.96	20.29
EES10297	Sorghum	cytosol	43.96	19.65
EES08935	Sorghum	cytosol	43.74	19.45
OQU83095	Sorghum	cytosol	43.05	19.34
OQU84068	Sorghum	golgi, plasma membrane, vacuole	30.3	19.22
OQU83293	Sorghum	extracellular, plasma membrane	40.09	19.09
KXG21016	Sorghum	cytosol	35.99	17.75
KXG28412	Sorghum	cytosol	40.32	16.42
KXG20043	Sorghum	cytosol	32.57	15.16
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	39.86	15.09
EES19053	Sorghum	cytosol	44.42	14.23
Zm00001d037650_P002	Maize	extracellular, plasma membrane	49.66	13.12
OQU77456	Sorghum	cytosol	33.26	11.31
KXG34721	Sorghum	cytosol, nucleus, peroxisome	3.64	2.78

Protein Annotations

EnsemblPlants:OQU84067	EnsemblPlantsGene:SORBI_3005G223775	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889
PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364	ProteinID:OQU84067	ProteinID:OQU84067.1	SEG:seg
SUPFAM:SSF52540	UniParc:UPI000B8BA855	UniProt:A0A1Z5RK75	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr5:+:71028898..71032675

Molecular Weight (calculated)

49113.2 Da

IEP (calculated)

8.939

GRAVY (calculated)

-0.383

Length

439 amino acids

Sequence
(BLAST)

001: MEFATGALGT LLPKLGQLLQ DEYNLQKGVK KDIQFVRKEL ESMHAALRDV GEVPQEQLKE VIRIWARDVR ELSYDMEDIV DTFLVRVQGS EPPSKRSVKR
101: FVKKMTSIVS NAKTRHDIGQ EIKDIKERVK DVAERRDRYK VDAITPTKTS VDPRITALYT KAASLVGIDK PREELISMLT KEDGGESSVE ERIVSIVGFG
201: GLGKTTLARA VYDKIKQQYN CTAFVSVSRD PDIIKILKDL LYELDRNEYM GIHNTALGQH HLTDLVQEFL KNKRYLIVID DIWDTKPWEM IRCALPENGK
301: KSGVLTTTRI TDVAEHVGGC YRMKLLTQES SKILFYGRIF GSIDKCPPQF SDVSENLLKK CGGVPLAIVT TSSLLANKSR NVNEWQDVCD SIGSGLRNNP
401: VASLPTESGC SPGRTQVTPA SPSGGRWLPI LGVRSSNNK

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.