CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0553600-01	Rice	cytosol	37.63	67.92
OQU84067	Sorghum	cytosol	47.04	30.75
Os12t0553200-01	Rice	nucleus	68.99	24.18
Os12t0516300-01	Rice	cytosol	68.64	21.18
Os12t0552900-01	Rice	cytosol	67.6	21.13
KXG34720	Sorghum	cytosol	40.07	19.79
OQU84065	Sorghum	cytosol	48.43	19.47
EES09021	Sorghum	cytosol	48.08	19.01
EES09013	Sorghum	cytosol	49.83	15.53
OQU84069	Sorghum	cytosol	48.43	15.01
OQU84066	Sorghum	cytosol	48.43	15.01
OQU83875	Sorghum	vacuole	43.21	14.5
KXG28972	Sorghum	cytosol	44.95	14.19
OQU84063	Sorghum	cytosol	44.95	14.08
OQU84059	Sorghum	cytosol	43.55	13.59
KXG24016	Sorghum	cytosol	44.25	13.35
OQU83293	Sorghum	extracellular, plasma membrane	42.16	13.12
KXG28969	Sorghum	endoplasmic reticulum, plasma membrane	41.12	13.11
OQU78620	Sorghum	cytosol	40.77	12.59
OQU83886	Sorghum	cytosol	39.72	12.49
EES10297	Sorghum	cytosol	42.51	12.42
OQU83095	Sorghum	cytosol	41.81	12.28
OQU83506	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	37.28	12.1
EES08935	Sorghum	cytosol	39.72	11.55
KXG28412	Sorghum	cytosol	41.12	10.95
KXG21016	Sorghum	cytosol	32.4	10.45
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	38.68	9.57
EES19053	Sorghum	cytosol	42.86	8.98
KXG20043	Sorghum	cytosol	25.09	7.64
OQU84064	Sorghum	cytosol	17.77	6.85
OQU77456	Sorghum	cytosol	29.62	6.58
KXG34721	Sorghum	cytosol, nucleus, peroxisome	4.88	2.43
OQU84068	Sorghum	golgi, plasma membrane, vacuole	4.53	1.88

Protein Annotations

EnsemblPlants:OQU88733	EnsemblPlantsGene:SORBI_3002G081850	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889
PANTHER:PTHR43889:SF40	PFAM:PF00931	ProteinID:OQU88732.1	ProteinID:OQU88733	ProteinID:OQU88733.1	ProteinID:OQU88734.1
SEG:seg	SUPFAM:SSF52540	UniParc:UPI0009DC8913	UniProt:A0A1W0W2Y7	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr2:-:8695293..8696971

Molecular Weight (calculated)

32520.8 Da

IEP (calculated)

8.615

GRAVY (calculated)

-0.194

Length

287 amino acids

Sequence
(BLAST)

001: MNIATGALST LLPKLAELVA GEYKLQKGVK REIEELIKEL ATMTEALHTV AEVPPDQLDK LVKIWAGDVR ELSYDIEDQV DTFMLRGKPL SQKRLIGTVT
101: SLIKKIKTNH QIHNAIEDIM DQLKKVAQRR DRYNVGNIIA AKPDIVPVDP RLEAMYRRAT ELVGIGGPKN ELAKRLLEED CSSSSRQQSN IISIVGFGGL
201: GKTTLANSLL QDLKSKFDCH IFVSVSVNPD IKKIFKNILL QLDENEYSRI DEGWEVKQLI DKTIEFLKNR RYDSVLHLLF IIVIYIK

Best Arabidopsis Sequence Match ( AT3G46710.1 )
(BLAST)

001: MVDAITEFVV GKIDNYLIEE APMLIGVKDD LEELKTELTC IQVYLKNVEV CDKEDEVSKE WTKLVLDIAY DVEDVLDTYF LKLEKRLHRL GLMRLTNIIS
101: DKKDAYNILD DIKTLKRRTL DVTRKLEMYG IGNFNEHRVV ASTSRVREVR RARSDDQEER VVGLTDDAKV LLTKLLDDDG DNKIYMISIF GMEGLGKTSL
201: ARKLFNSSDV KESFEYRVWT NVSGECNTRD ILMRIISSLE ETSEGELEKM AQQELEVYLH DILQEKRYLV VVDDIWESEA LESLKRALPC SYQGSRVIIT
301: TSIRVVAEGR DKRVYTHNIR FLTFKESWNL FEKKAFRYIL KVDQELQKIG KEMVQKCGGL PRTTVVLAGL MSRKKPNEWN DVWSSLRVKD DNIHVSSLFD
401: LSFKDMGHEL KLCFLYLSVF PEDYEVDVEK LIQLLVAEGF IQEDEEMTME DVARYYIEDL VYISLVEVVK RKKGKLMSFR IHDLVREFTI KKSKELNFVN
501: VYDEQHSSTT SRREVVHHLM DDNYLCDRRV NTQMRSFLFF GKRRNDITYV ETITLKLKLL RVLNLGGLHF ICQGYSPWSL PDVIGGLVHL RYLGIADTVV
601: NNLPDFISNL RFLQTLDASG NSFERMTDLS NLTSLRHLTG RFIGELLIGD AVNLQTLRSI SSYSWSKLKH ELLINLRDLE IYEFHILNDQ IKVPLDLVSL
701: SKLKNLRVLK IEVVSFSLFS EETVRFELLV KLTLHCDVRR LPRDMDLIFP SLESLTLVTN LQEDPMPTLQ KLQRLENLVL YSCVYPGAKM FINAQGFGRL
801: RKLKVIIKRL DELEIEEEAM PCLMKLNLDN KDGATKLMIP DRMRAFV

Arabidopsis Description

RPP13L2Putative disease resistance RPP13-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.