Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0553600-01 | Rice | cytosol | 18.68 | 96.23 |
| Os12t0516300-01 | Rice | cytosol | 96.46 | 84.95 |
| Os12t0552900-01 | Rice | cytosol | 84.0 | 74.95 |
| OQU88733 | Sorghum | cytosol | 24.18 | 68.99 |
| KXG34720 | Sorghum | cytosol | 43.35 | 61.1 |
| Os11t0588600-01 | Rice | cytosol, plasma membrane | 15.75 | 47.25 |
| Os02t0286850-00 | Rice | cytosol | 22.59 | 47.07 |
| Os10t0124400-00 | Rice | cytosol | 15.75 | 45.74 |
| Os06t0524900-01 | Rice | cytosol | 25.03 | 43.8 |
| Os09t0357400-00 | Rice | mitochondrion, plastid | 25.89 | 43.44 |
| Os08t0170100-01 | Rice | cytosol | 14.65 | 42.86 |
| Os01t0603100-01 | Rice | extracellular | 27.47 | 40.98 |
| KXG34721 | Sorghum | cytosol, nucleus, peroxisome | 27.11 | 38.54 |
| Os01t0350300-00 | Rice | cytosol | 19.54 | 38.19 |
| Os11t0590700-01 | Rice | cytosol | 39.44 | 37.82 |
| Os11t0550500-01 | Rice | cytosol | 40.29 | 36.1 |
| Os11t0588400-01 | Rice | cytosol | 38.71 | 34.8 |
| Os11t0130900-00 | Rice | cytosol | 39.68 | 33.61 |
| Os08t0170700-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 38.22 | 31.74 |
| Os08t0170200-00 | Rice | cytosol | 29.67 | 31.19 |
| Os02t0301800-02 | Rice | plasma membrane | 40.17 | 30.69 |
| Os11t0657900-00 | Rice | cytosol | 37.85 | 30.1 |
| Os07t0294100-00 | Rice | cytosol | 24.79 | 28.71 |
| Os11t0590900-00 | Rice | cytosol | 11.11 | 21.62 |
| Os05t0240200-03 | Rice | cytosol | 35.41 | 21.32 |
| Os08t0170800-01 | Rice | cytosol | 7.94 | 13.83 |
| Os11t0524601-00 | Rice | cytosol | 5.62 | 10.22 |
| Os11t0524900-00 | Rice | cytosol, nucleus, peroxisome | 5.01 | 5.81 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:4352476 | ProteinID:ABA99534.1 | ProteinID:BAF30006.1 |
| ProteinID:BAT17587.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:NB-ARC | EnsemblPlantsGene:Os12g0553200 | EnsemblPlants:Os12t0553200-01 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 |
| PANTHER:PTHR43889 | PANTHER:PTHR43889:SF40 | UniProt:Q2QNU4 | InterPro:RX-like_CC | SUPFAM:SSF52047 | SUPFAM:SSF52540 |
| UniParc:UPI0000680E59 | RefSeq:XP_015619870.1 | SEG:seg | : | : | : |
Description
NB-ARC domain containing protein. (Os12t0553200-01)
Coordinates
chr12:-:22488914..22492254
Molecular Weight (calculated)
93316.1 Da
IEP (calculated)
8.062
GRAVY (calculated)
-0.281
Length
819 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIATGAMNT LLPKLGELLV GEYKLQKGVK GEIEELEKEL KGMTAALHKV AETPVDQLDQ QVKIWASEVR ELSYDIEDAI DTFMLKCKGH EPATSFKKVT
101: NLFNKFKTNH QIHGVIKDIM DQVKKVSERR DRCRVDDIAA RPTVVDVDSR LEAMYRKATK LIGISKPKNE LTKQLLEYDG SSSQQSNIIS IVGFGGLGKT
201: TLANSLFQEL KAKFDSYCFV SVSLNPDINK ILKNILLQLD EKMYSHIDET WETKQLIDKI RDFLNNRRFL CVIDDVWKKS AWDTIKLAVQ DAKLGSKIIV
301: TTRNKVIAEH AGGGVYEMKP LSDDDSRQLF CKRIFDSNDD CPADLCGVTE KILKKCGGVP LAIITTACLL ASKPRNSEEW DKVNKSISLG LENNLDVDNM
401: RKILSLSYSD LPFHLKTCLL SLSKYTEDEL IRKYVLIWSW LAEGFITDET RPAGTSLQEI GESYFNELIN RSLIQPMSEN TLWDEDGKVH ACKVHDMVLE
501: LINQLSVEED FVTTYLSDGQ QTGKHTCTAQ KKKIRRLSLH NSNKSYASPE AREQLSKVRS ITIFGKVDSI PPLSSFHVLR VLQLEDCSGM DKNHLNHLDK
601: LLLLRFLRLG HYGATELPES IGKLESLETL DIRGARKPSS FKSHKVLFPM SFAKLRKLLR LYAGRVKLAQ GLMLGDMKSL QELVIEATRK VIKEIGNLTE
701: LRTLRIVFSS EKTFELKESI QTSIQRFTNL QDLDLRNNNS FEEIIDMQQV PSGLQRLFMH HSYMKAFPCW INSSMLSRLT TLSIWLCFEY LQSDHLDRLA
801: ELPSLRFLRL QLAFVSEQL
101: NLFNKFKTNH QIHGVIKDIM DQVKKVSERR DRCRVDDIAA RPTVVDVDSR LEAMYRKATK LIGISKPKNE LTKQLLEYDG SSSQQSNIIS IVGFGGLGKT
201: TLANSLFQEL KAKFDSYCFV SVSLNPDINK ILKNILLQLD EKMYSHIDET WETKQLIDKI RDFLNNRRFL CVIDDVWKKS AWDTIKLAVQ DAKLGSKIIV
301: TTRNKVIAEH AGGGVYEMKP LSDDDSRQLF CKRIFDSNDD CPADLCGVTE KILKKCGGVP LAIITTACLL ASKPRNSEEW DKVNKSISLG LENNLDVDNM
401: RKILSLSYSD LPFHLKTCLL SLSKYTEDEL IRKYVLIWSW LAEGFITDET RPAGTSLQEI GESYFNELIN RSLIQPMSEN TLWDEDGKVH ACKVHDMVLE
501: LINQLSVEED FVTTYLSDGQ QTGKHTCTAQ KKKIRRLSLH NSNKSYASPE AREQLSKVRS ITIFGKVDSI PPLSSFHVLR VLQLEDCSGM DKNHLNHLDK
601: LLLLRFLRLG HYGATELPES IGKLESLETL DIRGARKPSS FKSHKVLFPM SFAKLRKLLR LYAGRVKLAQ GLMLGDMKSL QELVIEATRK VIKEIGNLTE
701: LRTLRIVFSS EKTFELKESI QTSIQRFTNL QDLDLRNNNS FEEIIDMQQV PSGLQRLFMH HSYMKAFPCW INSSMLSRLT TLSIWLCFEY LQSDHLDRLA
801: ELPSLRFLRL QLAFVSEQL
001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL
Arabidopsis Description
Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.