Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0170100-01 | Rice | cytosol | 28.63 | 47.86 |
| Os12t0553600-01 | Rice | cytosol | 15.38 | 45.28 |
| Os11t0588600-01 | Rice | cytosol, plasma membrane | 26.28 | 45.05 |
| Os10t0124400-00 | Rice | cytosol | 26.28 | 43.62 |
| Os01t0350300-00 | Rice | cytosol | 32.05 | 35.8 |
| Os01t0603100-01 | Rice | extracellular | 41.03 | 34.97 |
| Os02t0286850-00 | Rice | cytosol | 29.06 | 34.61 |
| Os09t0357400-00 | Rice | mitochondrion, plastid | 28.42 | 27.25 |
| Os12t0553200-01 | Rice | nucleus | 43.8 | 25.03 |
| Os11t0590700-01 | Rice | cytosol | 44.23 | 24.24 |
| Os11t0588400-01 | Rice | cytosol | 46.15 | 23.71 |
| Os11t0130900-00 | Rice | cytosol | 48.08 | 23.27 |
| Os08t0170700-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 48.29 | 22.92 |
| Zm00001d007851_P002 | Maize | cytosol | 47.22 | 22.64 |
| Zm00001d024924_P001 | Maize | cytosol | 47.01 | 22.38 |
| Os12t0516300-01 | Rice | cytosol | 43.59 | 21.94 |
| Os12t0552900-01 | Rice | cytosol | 42.95 | 21.9 |
| Zm00001d004526_P001 | Maize | endoplasmic reticulum | 44.02 | 20.75 |
| Os11t0550500-01 | Rice | cytosol | 39.74 | 20.35 |
| Os11t0657900-00 | Rice | cytosol | 43.38 | 19.71 |
| HORVU3Hr1G099740.7 | Barley | cytosol | 45.51 | 19.31 |
| Os08t0170200-00 | Rice | cytosol | 29.91 | 17.97 |
| Os02t0301800-02 | Rice | plasma membrane | 39.74 | 17.35 |
| Zm00001d024973_P003 | Maize | cytosol | 38.89 | 17.3 |
| Os05t0240200-03 | Rice | cytosol | 44.23 | 15.22 |
| Os07t0294100-00 | Rice | cytosol | 22.01 | 14.57 |
| Os11t0524601-00 | Rice | cytosol | 3.42 | 3.56 |
| Os11t0590900-00 | Rice | cytosol | 0.0 | 0.0 |
| Os11t0524900-00 | Rice | cytosol, nucleus, peroxisome | 0.0 | 0.0 |
| Os08t0170800-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:4341183 | EMBL:AK121910 | ProteinID:BAD45684.1 | ProteinID:BAF19675.1 |
| ProteinID:BAS98028.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | InterPro:NB-ARC |
| EnsemblPlantsGene:Os06g0524900 | EnsemblPlants:Os06t0524900-01 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF33 | UniProt:Q654T3 | InterPro:RX-like_CC | SUPFAM:SSF52540 | UniParc:UPI000043A390 | RefSeq:XP_015641797.1 |
| SEG:seg | : | : | : | : | : |
Description
NB-ARC domain containing protein. (Os06t0524900-01)
Coordinates
chr6:+:19434822..19439087
Molecular Weight (calculated)
53144.2 Da
IEP (calculated)
5.403
GRAVY (calculated)
-0.194
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVAEAMGS LVPKLTELLK EEYKLQTGVR EKINFLKSEL EDMHAALRKV GSMHPDLLDE QVRIWASKVR ELSYDMEDVI DAFLVRVDGS VPANPGCLER
101: LVHMMCGLFT KIKVRHQISG VVQDINTKLE EVSKARERYI ASDLQANLAA TQLSTHDPRI LLSNTDAAKL VGIDGTRNDI IKILSLEGDN LPLGKMIKVS
201: IVGSGGMGKT TLSRAVYDSV KGKFQCSAFV PVGQNQDLKR VFMDVLNDLD KEKFDNIHST KKDVRLLMNE VYDFLENKRY IIVIDDIWKF DAWDMIAKVL
301: GDSSCGSRVI ITTRISEIAE EVGHVYEIKH LSDVDSRRLL HRRILSGEDQ CPDDDYDLEE VCDEILRKCE GVPLAIVTTS SLLESKPRED WSELYRSIAL
401: GAKDNRHVDN TMKILSLSFY HLPYHLRTCL LYLSAFPEDY LIGKQTLIWR WIGEGFVCKE EGRDLYEV
101: LVHMMCGLFT KIKVRHQISG VVQDINTKLE EVSKARERYI ASDLQANLAA TQLSTHDPRI LLSNTDAAKL VGIDGTRNDI IKILSLEGDN LPLGKMIKVS
201: IVGSGGMGKT TLSRAVYDSV KGKFQCSAFV PVGQNQDLKR VFMDVLNDLD KEKFDNIHST KKDVRLLMNE VYDFLENKRY IIVIDDIWKF DAWDMIAKVL
301: GDSSCGSRVI ITTRISEIAE EVGHVYEIKH LSDVDSRRLL HRRILSGEDQ CPDDDYDLEE VCDEILRKCE GVPLAIVTTS SLLESKPRED WSELYRSIAL
401: GAKDNRHVDN TMKILSLSFY HLPYHLRTCL LYLSAFPEDY LIGKQTLIWR WIGEGFVCKE EGRDLYEV
001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC
Arabidopsis Description
RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.