Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU77456 | Sorghum | cytosol | 61.99 | 65.3 |
| EES19053 | Sorghum | cytosol | 64.04 | 63.58 |
| Os08t0170100-01 | Rice | cytosol | 11.62 | 56.43 |
| Os11t0130900-00 | Rice | cytosol | 39.63 | 55.74 |
| Os08t0170200-00 | Rice | cytosol | 31.91 | 55.71 |
| Os02t0286850-00 | Rice | cytosol | 14.56 | 50.38 |
| Os08t0170700-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 35.51 | 48.99 |
| Os09t0357400-00 | Rice | mitochondrion, plastid | 15.88 | 44.26 |
| Os06t0524900-01 | Rice | cytosol | 15.22 | 44.23 |
| Os01t0603100-01 | Rice | extracellular | 16.69 | 41.35 |
| Zm00001d007851_P002 | Maize | cytosol | 28.53 | 39.75 |
| Os10t0124400-00 | Rice | cytosol | 8.01 | 38.65 |
| Os11t0588400-01 | Rice | cytosol | 25.81 | 38.53 |
| Os11t0588600-01 | Rice | cytosol, plasma membrane | 7.72 | 38.46 |
| Os11t0590700-01 | Rice | cytosol | 24.04 | 38.29 |
| Os01t0350300-00 | Rice | cytosol | 11.76 | 38.19 |
| Zm00001d024924_P001 | Maize | cytosol | 27.28 | 37.74 |
| HORVU3Hr1G099740.7 | Barley | cytosol | 29.04 | 35.81 |
| Zm00001d004526_P001 | Maize | endoplasmic reticulum | 26.1 | 35.75 |
| Os12t0553200-01 | Rice | nucleus | 21.32 | 35.41 |
| Os11t0550500-01 | Rice | cytosol | 23.53 | 35.01 |
| Os08t0170800-01 | Rice | cytosol | 11.99 | 34.68 |
| Os12t0552900-01 | Rice | cytosol | 23.31 | 34.53 |
| Zm00001d024973_P003 | Maize | cytosol | 26.54 | 34.32 |
| Os11t0657900-00 | Rice | cytosol | 25.74 | 33.98 |
| Os12t0516300-01 | Rice | cytosol | 22.72 | 33.23 |
| Os02t0301800-02 | Rice | plasma membrane | 25.88 | 32.84 |
| Os07t0294100-00 | Rice | cytosol | 16.25 | 31.26 |
| Os11t0590900-00 | Rice | cytosol | 9.34 | 30.17 |
| Os12t0553600-01 | Rice | cytosol | 3.38 | 28.93 |
| Os11t0524601-00 | Rice | cytosol | 4.63 | 14.0 |
| Os11t0524900-00 | Rice | cytosol, nucleus, peroxisome | 5.66 | 10.91 |
Protein Annotations
| Gene3D:2.130.10.10 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A0P0WJS3 | ProteinID:BAS92964.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | EnsemblPlantsGene:Os05g0240200 | EnsemblPlants:Os05t0240200-03 | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PRINTS:PR00364 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF33 |
| InterPro:RX-like_CC | SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF52047 | SUPFAM:SSF52540 | UniParc:UPI0000E123C8 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
OsWD40-115Similar to NB-ARC domain containing protein, expressed. (Os05t0240200-01);Similar to NB-ARC domain containing protein, expressed. (Os05t0240200-02);Similar to NB-ARC domain containing protein, expressed. (Os05t0240200-03)
Coordinates
chr5:-:8526487..8535118
Molecular Weight (calculated)
152425.0 Da
IEP (calculated)
6.300
GRAVY (calculated)
-0.125
Length
1360 amino acids
Sequence
(BLAST)
(BLAST)
0001: GRRSSLSREL DVVHAVLRKI GDVPSEQVDE LVKLWARDVR EASYEMEDIV DTFLVHDDGP DPTDPHMLLR LRKKLGKLFK KSKARRKISN LIQDINKKFE
0101: QVKARHVKYT VDSVVLKSLA ATTIDPRLQN LYKRATELVG IDGPRDDLIN KLSLGGDVDV SDKKMKVISV VGFGGLGKTT LAKAVYDHFK PHFKCRASVP
0201: VDQNPDMNKA FDDQVEPHFE CGAFVPVGRN PDMKKVFRDI LIDLDKEKYT NPNMMVLDEK QLMDELKEFV KEKRCFIVID DIWDKESWKL IRCALQESDC
0301: GSRLVITTRI SEVATHAGEA YKIQPLSRDN SEKLLYARIV DGEWKYFDNP SAKACEKILK KCGGVPLAII TIASLLASKP GEDWSEVYNS VGFGHEDNDD
0401: VGNTRRILSF SYYDLSSHLK DCLLYLCVFP EDHVIEKNSL IWKWIAEGFI HEELAAGLGL FELGERCFNE LINRSMIQPV ETKHEGYVDG CCVHDMVLDM
0501: IHSLSSEENF VTVLNGDERQ KLPGSIARRL ALQRVLVHKD GQLANITLKN VRSLIASQCF GSLCLHTPVL RVLDVINCAE SETPNVLEDR DKTMPSHLGS
0601: LLHLRYLGLV DTYITKLPRE VRYLKFLQTL DLRGSRIKEL PEEVGLLTQL VCLRADWEIM VKIGLIGKLT SLQELWIEPA AAVYDDDAAS VDDDDDAAAV
0701: DDTTKSTMKF VNELGLLREL RVLRTYFEDL NESMERALLE SLSKLHNIRD LHIEGPPLVT RRVTSSARSV SCLHLRYLCL NCFVFSGLPA WIKSSLAPNL
0801: SCLDVVVLIV KEQDMETLAR LPELRCLVLR LHETELVSIK IHTEDVGYFR KLRILRILGT SIWFDLHGSK CNITDNRSLA SIIMPSLEFL EFAVHMRFLK
0901: DATQLGFDKL LSFEKLGRSS LQKVTIVLKC GDARLSEVEE VAAALMNSAA VHPKHPTVQT KWQDEQAVLS PYQEAYMHVS RTPELVNEAW KANIVSSGRI
1001: RALRMPVTEA SSSKVICLLY RKSGKGLLAL SSNAVHKLWK WESNDKNPAG MSTTSVPPQV WQPESDILMN DTANGNPEEA AACSLLSKND CYLISASGGK
1101: VSLFNMLNFK TMTTFIAPPP SATFLAFHPH DNNIIAIGTD DSSILLYNIR VDEVKWVLKG HQKKITGLVF SLSMNVLVSS GADSQLCVWS MEDWAKKKSR
1201: YIQPPSNHSG ALVGDIMVQF HYDQKRLLVV HESQLAIYDE ELECLCSWFP SDPLSAPVSS AVYSSDGLLI YAGFCDGAIG IFQVESLMLQ CRIAPSAYIP
1301: SSVSSGGEIV YPMVVAAHPW KPNQFAVGMS DGAVHVLEPL DTPDDIISNS IQQGRFGDSG
0101: QVKARHVKYT VDSVVLKSLA ATTIDPRLQN LYKRATELVG IDGPRDDLIN KLSLGGDVDV SDKKMKVISV VGFGGLGKTT LAKAVYDHFK PHFKCRASVP
0201: VDQNPDMNKA FDDQVEPHFE CGAFVPVGRN PDMKKVFRDI LIDLDKEKYT NPNMMVLDEK QLMDELKEFV KEKRCFIVID DIWDKESWKL IRCALQESDC
0301: GSRLVITTRI SEVATHAGEA YKIQPLSRDN SEKLLYARIV DGEWKYFDNP SAKACEKILK KCGGVPLAII TIASLLASKP GEDWSEVYNS VGFGHEDNDD
0401: VGNTRRILSF SYYDLSSHLK DCLLYLCVFP EDHVIEKNSL IWKWIAEGFI HEELAAGLGL FELGERCFNE LINRSMIQPV ETKHEGYVDG CCVHDMVLDM
0501: IHSLSSEENF VTVLNGDERQ KLPGSIARRL ALQRVLVHKD GQLANITLKN VRSLIASQCF GSLCLHTPVL RVLDVINCAE SETPNVLEDR DKTMPSHLGS
0601: LLHLRYLGLV DTYITKLPRE VRYLKFLQTL DLRGSRIKEL PEEVGLLTQL VCLRADWEIM VKIGLIGKLT SLQELWIEPA AAVYDDDAAS VDDDDDAAAV
0701: DDTTKSTMKF VNELGLLREL RVLRTYFEDL NESMERALLE SLSKLHNIRD LHIEGPPLVT RRVTSSARSV SCLHLRYLCL NCFVFSGLPA WIKSSLAPNL
0801: SCLDVVVLIV KEQDMETLAR LPELRCLVLR LHETELVSIK IHTEDVGYFR KLRILRILGT SIWFDLHGSK CNITDNRSLA SIIMPSLEFL EFAVHMRFLK
0901: DATQLGFDKL LSFEKLGRSS LQKVTIVLKC GDARLSEVEE VAAALMNSAA VHPKHPTVQT KWQDEQAVLS PYQEAYMHVS RTPELVNEAW KANIVSSGRI
1001: RALRMPVTEA SSSKVICLLY RKSGKGLLAL SSNAVHKLWK WESNDKNPAG MSTTSVPPQV WQPESDILMN DTANGNPEEA AACSLLSKND CYLISASGGK
1101: VSLFNMLNFK TMTTFIAPPP SATFLAFHPH DNNIIAIGTD DSSILLYNIR VDEVKWVLKG HQKKITGLVF SLSMNVLVSS GADSQLCVWS MEDWAKKKSR
1201: YIQPPSNHSG ALVGDIMVQF HYDQKRLLVV HESQLAIYDE ELECLCSWFP SDPLSAPVSS AVYSSDGLLI YAGFCDGAIG IFQVESLMLQ CRIAPSAYIP
1301: SSVSSGGEIV YPMVVAAHPW KPNQFAVGMS DGAVHVLEPL DTPDDIISNS IQQGRFGDSG
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRTSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAEGF PPLGAHGPFQ PTPSPVPTPL AGWMSSPSSV PHPAVSGGPI ALGAPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: DHVSKRTRPM GISDEVSLGV NMLPMTFPGQ AHGHNQTFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCVT TCGDDKTIKV WDAATGVKRY
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDTIQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN SDGLRLLHTV ENLSSESSKP AINSIPMVER
0701: PASVVSIPGM NGDSRNMVDV KPVITEESND KSKVWKLTEV GEPSQCRSLR LPENMRVTKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDVAE TNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQKSKVLQI PQGRSTSSLS DTRVQFHQDQ VHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: AAPITHATFS CDSQLIYTSF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQESNMFA VGLSDGGVHI FEPLESEGKW GVAPPPENGS
1101: ASAVTATPSV GASASDQPQR
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRTSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAEGF PPLGAHGPFQ PTPSPVPTPL AGWMSSPSSV PHPAVSGGPI ALGAPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: DHVSKRTRPM GISDEVSLGV NMLPMTFPGQ AHGHNQTFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCVT TCGDDKTIKV WDAATGVKRY
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDTIQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN SDGLRLLHTV ENLSSESSKP AINSIPMVER
0701: PASVVSIPGM NGDSRNMVDV KPVITEESND KSKVWKLTEV GEPSQCRSLR LPENMRVTKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDVAE TNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQKSKVLQI PQGRSTSSLS DTRVQFHQDQ VHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: AAPITHATFS CDSQLIYTSF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQESNMFA VGLSDGGVHI FEPLESEGKW GVAPPPENGS
1101: ASAVTATPSV GASASDQPQR
Arabidopsis Description
TPR1Topless-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.