Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU88733 | Sorghum | cytosol | 67.92 | 37.63 |
| Os11t0588600-01 | Rice | cytosol, plasma membrane | 53.46 | 31.14 |
| Os10t0124400-00 | Rice | cytosol | 47.17 | 26.6 |
| Os08t0170100-01 | Rice | cytosol | 44.65 | 25.36 |
| Os12t0553200-01 | Rice | nucleus | 96.23 | 18.68 |
| Os12t0516300-01 | Rice | cytosol | 98.74 | 16.88 |
| Os12t0552900-01 | Rice | cytosol | 89.31 | 15.47 |
| Os06t0524900-01 | Rice | cytosol | 45.28 | 15.38 |
| KXG34720 | Sorghum | cytosol | 39.62 | 10.84 |
| Os07t0294100-00 | Rice | cytosol | 44.03 | 9.9 |
| Os01t0603100-01 | Rice | extracellular | 33.33 | 9.65 |
| Os11t0590700-01 | Rice | cytosol | 48.43 | 9.02 |
| Os01t0350300-00 | Rice | cytosol | 22.64 | 8.59 |
| Os11t0588400-01 | Rice | cytosol | 49.06 | 8.56 |
| Os11t0130900-00 | Rice | cytosol | 48.43 | 7.96 |
| Os11t0550500-01 | Rice | cytosol | 45.28 | 7.88 |
| Os11t0657900-00 | Rice | cytosol | 45.91 | 7.09 |
| Os08t0170700-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 43.4 | 7.0 |
| Os02t0301800-02 | Rice | plasma membrane | 37.11 | 5.5 |
| Os05t0240200-03 | Rice | cytosol | 28.93 | 3.38 |
| Os11t0524601-00 | Rice | cytosol | 5.03 | 1.78 |
| Os09t0357400-00 | Rice | mitochondrion, plastid | 2.52 | 0.82 |
| Os02t0286850-00 | Rice | cytosol | 1.89 | 0.76 |
| KXG34721 | Sorghum | cytosol, nucleus, peroxisome | 2.52 | 0.69 |
| Os11t0524900-00 | Rice | cytosol, nucleus, peroxisome | 0.0 | 0.0 |
| Os11t0590900-00 | Rice | cytosol | 0.0 | 0.0 |
| Os08t0170800-01 | Rice | cytosol | 0.0 | 0.0 |
| Os08t0170200-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os12t0553600-01 | EnsemblPlantsGene:Os12g0553600 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 |
| InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF40 | ProteinID:BAH95732.1 | ProteinID:BAT17588.1 |
| ProteinID:EAZ20675.1 | SEG:seg | UniParc:UPI0000F22879 | UniProt:A3CHW2 | MapMan:35.2 | : |
Description
Similar to NB-ARC domain containing protein. (Os12t0553600-01)
Coordinates
chr12:-:22497610..22502497
Molecular Weight (calculated)
18103.9 Da
IEP (calculated)
6.962
GRAVY (calculated)
-0.511
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIATGAMNT LLPKLGELLV GEYKLQKGVK GEIEELEKEL KGMNAALHKV AETPVDQLDQ QVKIWASEVR ELSYDIEDAI DTFMLKCKGH EPATSFKKVT
101: NLFNKFKTNH QIHGVMKDIM DQVKKVSERR DRYIVDDNAA RPTVVDVDPR LEAMYRKAT
101: NLFNKFKTNH QIHGVMKDIM DQVKKVSERR DRYIVDDNAA RPTVVDVDPR LEAMYRKAT
001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC
Arabidopsis Description
RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.