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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
 extracellular: 26072143
msms PMID: 26072143 doi
B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G542300.1 Wheat cytosol 54.28 52.74
TraesCS1B01G000300.1 Wheat cytosol 25.68 49.82
Os10t0124400-00 Rice cytosol 25.32 49.29
TraesCS3A01G536200.1 Wheat cytosol, endoplasmic reticulum 44.81 48.91
TraesCS7A01G555200.1 Wheat cytosol 23.68 48.33
Os02t0286850-00 Rice cytosol 33.88 47.33
TraesCS3D01G472700.1 Wheat cytosol, endoplasmic reticulum 50.64 44.2
TraesCS3D01G473800.2 Wheat cytosol, endoplasmic reticulum 50.64 44.2
TraesCS3D01G541600.1 Wheat cytosol, extracellular 22.04 43.37
TraesCS3A01G478900.1 Wheat cytosol 22.59 42.91
TraesCS3D01G472900.1 Wheat cytosol, extracellular 19.67 42.19
Os06t0524900-01 Rice cytosol 34.97 41.03
TraesCS1D01G006000.1 Wheat cytosol 55.92 40.72
Os09t0357400-00 Rice mitochondrion, plastid 35.52 39.96
Os01t0350300-00 Rice cytosol 29.87 39.14
TraesCS3A01G479300.1 Wheat cytosol 12.2 38.51
TraesCS1B01G002500.1 Wheat peroxisome 57.92 38.27
TraesCS3D01G474100.1 Wheat cytosol, extracellular 11.84 38.24
Os08t0170100-01 Rice cytosol 19.13 37.5
TraesCS3D01G474200.1 Wheat cytosol 34.24 37.15
TraesCS3D01G541500.1 Wheat cytosol 9.47 35.86
TraesCS1A01G004000.1 Wheat cytosol 48.63 35.7
TraesCS7B01G479900.1 Wheat endoplasmic reticulum, plasma membrane 54.28 35.6
Os11t0588600-01 Rice cytosol, plasma membrane 17.67 35.53
TraesCS1D01G006300.1 Wheat cytosol 40.62 35.4
TraesCS3A01G479200.1 Wheat extracellular, plasma membrane 49.73 35.27
TraesCS1B01G000500.1 Wheat cytosol 57.19 33.58
TraesCS1B01G002900.2 Wheat cytosol 56.65 33.37
Os12t0553600-01 Rice cytosol 9.65 33.33
HORVU3Hr1G104770.2 Barley cytosol, plasma membrane, plastid 53.37 31.88
TraesCS7A01G004900.1 Wheat cytosol 54.1 31.83
TraesCS3B01G522400.1 Wheat extracellular 40.8 31.42
TraesCS3B01G523000.1 Wheat extracellular, plasma membrane 52.46 31.03
TraesCS3A01G479400.2 Wheat extracellular, plasma membrane 51.91 30.91
TraesCS3A01G479100.1 Wheat extracellular, plasma membrane 51.73 30.87
TraesCS1D01G032200.2 Wheat cytosol 53.73 30.73
TraesCS3B01G523300.1 Wheat cytosol, plasma membrane 53.37 30.65
TraesCS3B01G522600.1 Wheat cytosol, extracellular, plasma membrane 51.0 30.5
TraesCS3D01G473700.1 Wheat plasma membrane 50.64 30.48
TraesCS3B01G522700.1 Wheat cytosol 51.55 30.27
TraesCS3B01G523400.1 Wheat plasma membrane 46.27 29.92
TraesCS3D01G474300.1 Wheat extracellular, plasma membrane 49.73 29.71
TraesCS3B01G522500.1 Wheat cytosol 49.91 29.69
TraesCS3B01G522800.1 Wheat cytosol 47.36 29.58
TraesCS3D01G474000.2 Wheat extracellular, plasma membrane 50.82 28.21
Os12t0553200-01 Rice nucleus 40.98 27.47
Os11t0590700-01 Rice cytosol 39.53 25.41
Os11t0550500-01 Rice cytosol 42.26 25.38
Os11t0657900-00 Rice cytosol 47.54 25.34
HORVU7Hr1G121050.1 Barley cytosol 32.42 25.32
Os11t0130900-00 Rice cytosol 44.08 25.03
Os08t0170700-00 Rice cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 44.26 24.64
Os12t0516300-01 Rice cytosol 41.71 24.62
Os12t0552900-01 Rice cytosol 40.44 24.18
TraesCS3B01G607700.1 Wheat cytosol 29.69 24.08
Os11t0588400-01 Rice cytosol 39.53 23.82
HORVU7Hr1G121150.11 Barley cytosol 32.42 23.64
Os08t0170200-00 Rice cytosol 31.15 21.95
TraesCS3A01G479000.1 Wheat cytosol 23.32 21.88
Os02t0301800-02 Rice plasma membrane 39.53 20.24
Os05t0240200-03 Rice cytosol 41.35 16.69
HORVU3Hr1G105020.36 Barley plasma membrane 14.75 15.98
Os07t0294100-00 Rice cytosol 18.58 14.43
Os11t0524601-00 Rice cytosol 3.28 4.0
Os11t0590900-00 Rice cytosol 2.19 2.85
Os08t0170800-01 Rice cytosol 0.0 0.0
Os11t0524900-00 Rice cytosol, nucleus, peroxisome 0.0 0.0
Protein Annotations
Gene3D:1.10.8.430Gene3D:3.40.50.300MapMan:35.1EMBL:AK073480ProteinID:BAD52652.1ProteinID:BAD53120.1
ProteinID:BAF05417.2ProteinID:BAS73042.1GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0043531InterPro:NB-ARCEnsemblPlantsGene:Os01g0603100EnsemblPlants:Os01t0603100-01
InterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364PANTHER:PTHR43889PANTHER:PTHR43889:SF25UniProt:Q5ZBA8
InterPro:RX-like_CCSUPFAM:SSF52540UniParc:UPI0000446AD3SEG:seg::
Description
NB-ARC domain containing protein. (Os01t0603100-01)
Coordinates
chr1:+:23746840..23751713
Molecular Weight (calculated)
62889.3 Da
IEP (calculated)
5.903
GRAVY (calculated)
-0.361
Length
549 amino acids
Sequence
(BLAST)
001: MSLLLKKVCE LLMAELNLDK KLTKSIGDLR TELTMMHGVV RWIGEVPPEQ LDGQVRLWAR QVREISYDME DAVDAYLVRV ADGEPEAAKQ NRRLSESLKR
101: AARLFTKGRA LHQIAGAVEE AQGRGKSLSD LRQKYGGLKL HGAGEGCAAI DPRLTALYVE VAKLVSVDKA RDELSELLLS SSGGSMQQQQ QLRTVSVFGF
201: GGLGKTTLAR AVYESIREQF DCAAFVSVSR NPNITKIFRK LLFELDREQY SDINDLDRDD VQLIDELRSF LQSRRYLIVI DDLWDENVWK FIKCVLYENN
301: LSSRIITTTR KINVSKACCS SGDDKIYEMK RLSDDDSKKL LYTRIFTHEN NCPHELKQVS TDILKKCDGV PLAIITIASL LAGNNNRPIK TKDQWHNLLN
401: SIGRGLTVGE GVDDMQKILS FSYYDLPPHL KTCLLYLSIF PEDYEIERDR LIWRWIAEDF VQCENNWDNL FEVGESYFNE LINRSMVEPV GIDFEGRAQA
501: CRVHDMMLDF ILSLSKEENF ITIIDDSEHR TSWQHKNDNK IRRLAIQNT
Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)
001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL
Arabidopsis Description
Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.