Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0553600-01 | Rice | cytosol | 15.47 | 89.31 |
| Os12t0553200-01 | Rice | nucleus | 74.95 | 84.0 |
| Os12t0516300-01 | Rice | cytosol | 83.12 | 82.04 |
| OQU88733 | Sorghum | cytosol | 21.13 | 67.6 |
| KXG34720 | Sorghum | cytosol | 38.45 | 60.76 |
| Os02t0286850-00 | Rice | cytosol | 21.02 | 49.11 |
| Os10t0124400-00 | Rice | cytosol | 14.6 | 47.52 |
| Os11t0588600-01 | Rice | cytosol, plasma membrane | 13.62 | 45.79 |
| KXG34721 | Sorghum | cytosol, nucleus, peroxisome | 27.89 | 44.44 |
| Os09t0357400-00 | Rice | mitochondrion, plastid | 22.88 | 43.03 |
| Os06t0524900-01 | Rice | cytosol | 21.9 | 42.95 |
| Os08t0170100-01 | Rice | cytosol | 13.07 | 42.86 |
| Os01t0603100-01 | Rice | extracellular | 24.18 | 40.44 |
| Os11t0550500-01 | Rice | cytosol | 39.98 | 40.15 |
| Os01t0350300-00 | Rice | cytosol | 17.86 | 39.14 |
| Os11t0590700-01 | Rice | cytosol | 36.27 | 38.99 |
| Os11t0588400-01 | Rice | cytosol | 36.38 | 36.66 |
| Os11t0130900-00 | Rice | cytosol | 38.24 | 36.3 |
| Os08t0170700-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 37.04 | 34.48 |
| Os08t0170200-00 | Rice | cytosol | 28.87 | 34.02 |
| Os11t0657900-00 | Rice | cytosol | 37.8 | 33.69 |
| Os02t0301800-02 | Rice | plasma membrane | 38.67 | 33.12 |
| Os07t0294100-00 | Rice | cytosol | 24.51 | 31.82 |
| Os11t0590900-00 | Rice | cytosol | 11.87 | 25.89 |
| Os05t0240200-03 | Rice | cytosol | 34.53 | 23.31 |
| Os11t0524601-00 | Rice | cytosol | 8.28 | 16.89 |
| Os08t0170800-01 | Rice | cytosol | 7.84 | 15.32 |
| Os11t0524900-00 | Rice | cytosol, nucleus, peroxisome | 8.06 | 10.48 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:4352475 | ProteinID:ABA99531.1 | ProteinID:BAF30005.1 |
| ProteinID:BAT17583.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:NB-ARC | EnsemblPlantsGene:Os12g0552900 | EnsemblPlants:Os12t0552900-01 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 |
| PANTHER:PTHR43889 | PANTHER:PTHR43889:SF40 | UniProt:Q2QNU7 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI0000680E5C | RefSeq:XP_015618843.1 | RefSeq:XP_015618844.1 | SEG:seg | : | : |
Description
NB-ARC domain containing protein. (Os12t0552900-01)
Coordinates
chr12:-:22477070..22481284
Molecular Weight (calculated)
104380.0 Da
IEP (calculated)
7.529
GRAVY (calculated)
-0.230
Length
918 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVATGAMNT LLPKLGELLV GEYKLQKGVK GEIEELEKEL TSMTAALHKV AETPADKLDK LAKIWASDVR ELSYDIEDAI DTFMIKGKGH ELATSFKKVT
101: NLFNKFKTNH QIHGVIKDIM DQVKKVSERR SRYIVDDIAA RPTIVDVDPR LEAMYRKATE LVGINEPKSE LTKRLLEHDY SSRQQSNIIS IVGFGGLGKT
201: TLANSLLQEL EAKFDCHFFV SVSLKPDINK ILKSILPQLD KKRYAHINEA WETKQFIDEI QDFLKNKRFL CVIDDVWEKS AWDDIKLAVQ DAKLGSKIIV
301: TTRNMVVAEH AGGGVYEMKP LSNDDSRQLF CKRIFDSNDD CPGDLCGVTE KILKKCGGVP LAIITTACLL ASKPRNSEEW DKVNKSISLG LENNLDVDNM
401: RKILSLSYND LPFHLKTCLL SLSKYPEDEL IRKDVLIWGW LAEGFITDET RLAGTSLQEI GESYFSELIN RSLIQPMDTY FQYEDGKVHE CRVHDMVLEL
501: INQLSAEEDF VTTYLSDGQQ AGKCTCTTQK KKKIHRLSLH NSNKSYASPE AREQLSKVRS LTIFGKVDSI PPLSSFHVLR VLQIEDCSGM GKNHFSDLGK
601: LRLLRFMRLG CYSATELPES IGKLESLETL DIRGARSRTP YYSFKSPKVV FPMSFVKLRK LLRLFAGEVK LAQGLMLGNM KSLQELEVEA TPEVIKEIGY
701: LKELRTLRII VNSQISETLE LVESIQTSIK RLTNLQDLDL RLSGVRETID MQQIPSGLQR LFMFRLDMEA FPCWINSSML SRLTALSILL KSEYLQPDHL
801: DRLAKLPSLR FLRLELEGDP FRLKQLTIHR GACAFRSLKY FHLYSYMMPS FQPGAMPHLE RLCLLIMTFI VRGDLNDLGL ENLHSLRHVT IHSCNDETKA
901: VVKEALKDCP NQAALELY
101: NLFNKFKTNH QIHGVIKDIM DQVKKVSERR SRYIVDDIAA RPTIVDVDPR LEAMYRKATE LVGINEPKSE LTKRLLEHDY SSRQQSNIIS IVGFGGLGKT
201: TLANSLLQEL EAKFDCHFFV SVSLKPDINK ILKSILPQLD KKRYAHINEA WETKQFIDEI QDFLKNKRFL CVIDDVWEKS AWDDIKLAVQ DAKLGSKIIV
301: TTRNMVVAEH AGGGVYEMKP LSNDDSRQLF CKRIFDSNDD CPGDLCGVTE KILKKCGGVP LAIITTACLL ASKPRNSEEW DKVNKSISLG LENNLDVDNM
401: RKILSLSYND LPFHLKTCLL SLSKYPEDEL IRKDVLIWGW LAEGFITDET RLAGTSLQEI GESYFSELIN RSLIQPMDTY FQYEDGKVHE CRVHDMVLEL
501: INQLSAEEDF VTTYLSDGQQ AGKCTCTTQK KKKIHRLSLH NSNKSYASPE AREQLSKVRS LTIFGKVDSI PPLSSFHVLR VLQIEDCSGM GKNHFSDLGK
601: LRLLRFMRLG CYSATELPES IGKLESLETL DIRGARSRTP YYSFKSPKVV FPMSFVKLRK LLRLFAGEVK LAQGLMLGNM KSLQELEVEA TPEVIKEIGY
701: LKELRTLRII VNSQISETLE LVESIQTSIK RLTNLQDLDL RLSGVRETID MQQIPSGLQR LFMFRLDMEA FPCWINSSML SRLTALSILL KSEYLQPDHL
801: DRLAKLPSLR FLRLELEGDP FRLKQLTIHR GACAFRSLKY FHLYSYMMPS FQPGAMPHLE RLCLLIMTFI VRGDLNDLGL ENLHSLRHVT IHSCNDETKA
901: VVKEALKDCP NQAALELY
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.