Factsheet for Os02t0301800-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
plasma membrane 4
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	cytosol, plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0286850-00	Rice	cytosol	17.54	47.84
Os09t0357400-00	Rice	mitochondrion, plastid	20.34	44.67
Os11t0550500-01	Rice	cytosol	35.17	41.25
Os11t0588600-01	Rice	cytosol, plasma membrane	10.45	41.03
Os08t0170100-01	Rice	cytosol	10.54	40.36
Os12t0553200-01	Rice	nucleus	30.69	40.17
Os06t0524900-01	Rice	cytosol	17.35	39.74
Os01t0603100-01	Rice	extracellular	20.24	39.53
Os10t0124400-00	Rice	cytosol	10.35	39.36
Os12t0552900-01	Rice	cytosol	33.12	38.67
Os08t0170200-00	Rice	cytosol	27.89	38.38
Os11t0590700-01	Rice	cytosol	30.41	38.17
Os12t0516300-01	Rice	cytosol	33.02	38.06
Os11t0588400-01	Rice	cytosol	31.62	37.21
Os12t0553600-01	Rice	cytosol	5.5	37.11
Os11t0130900-00	Rice	cytosol	33.3	36.92
Os01t0350300-00	Rice	cytosol	14.37	36.75
Os08t0170700-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	31.9	34.69
Os11t0657900-00	Rice	cytosol	32.09	33.4
Os07t0294100-00	Rice	cytosol	21.36	32.39
Os11t0590900-00	Rice	cytosol	11.29	28.74
Os05t0240200-03	Rice	cytosol	32.84	25.88
Os11t0524601-00	Rice	cytosol	8.77	20.89
Os08t0170800-01	Rice	cytosol	8.96	20.43
Os11t0524900-00	Rice	cytosol, nucleus, peroxisome	12.78	19.41

Protein Annotations

Gene3D:2.100.10.30	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:4329096	ProteinID:BAD23250.1
ProteinID:BAD23344.1	ProteinID:BAS78260.1	ncoils:Coil	ProteinID:EAZ22703.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	GO:GO:0043531	InterPro:IPR001229	InterPro:IPR032675
InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	InterPro:LRR_dom_sf	InterPro:NB-ARC
EnsemblPlantsGene:Os02g0301800	EnsemblPlants:Os02t0301800-02	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01419	PRINTS:PR00364
PFscan:PS51752	PANTHER:PTHR43889	PANTHER:PTHR43889:SF18	UniProt:Q6K4U3	InterPro:RX-like_CC	SMART:SM00915
SUPFAM:SSF51101	SUPFAM:SSF52058	SUPFAM:SSF52540	SignalP:SignalP-noTM	UniParc:UPI00003B05A5	RefSeq:XP_015627493.1
RefSeq:XP_015627494.1	SEG:seg	:	:	:	:

Description

NB-ARC domain containing protein. (Os02t0301800-01);NB-ARC domain containing protein. (Os02t0301800-02)

Coordinates

chr2:-:11701995..11707651

Molecular Weight (calculated)

121840.0 Da

IEP (calculated)

7.885

GRAVY (calculated)

-0.138

Length

1072 amino acids

Sequence
(BLAST)

0001: MAVVAGAMTA LIAKLTTLLM DQYKLQNSAR GDIIFIKAEL ESIQAALEKL FEVQVTDRQV KIWERDVREQ SYDMEDIIDN FMVHVETHLL AKPHELKGFM
0101: KGSLSLLRRA MVRYRVATDI KRIRRLVNET SARRDRYKVG TIVAAAKTET AIDPRLIGIY GEATKLIGIS GPKEELTKLL MDSKGNSKNK LKVISIVGVG
0201: GLGKTTLANV IYQQLRGQFE CHAFVSVSLK PDLKKVLSSI LRQFSEQGYA WTETWCAQEI INKIRDEIKE KRYLIVIDDI WEKSAWECIE CALIENDRGS
0301: RIITTSRVLD AATPCSSEVD HTVYKLQPLS SDNSKKLFYK RIFYCEDGCP LELKDISEKT LRKCEGVPLA IITIGSLLAM RPQNLYQWDR VHNLIGSGLE
0401: KSHHVENMRH ILSISYYDLP AHLRACFLYL SIYPEDYNIQ KDQLIRRWIS EGFILGEDMD TLHEGGKYFN ELINRSMIQP AYIDSHGRVH ACRVHDMVLD
0501: LITSLSNETN FVTSLGGQQP TYHPNRARRL CLQNSIYDHT IRQEKMKWPR VRSLIVFPHA TNLLPSLSRF RILRVLDLEG CQDLKNHQIE GISDLFHLRS
0601: LVLKDTNIGS LPKKIGNLSC LHTLDIRHTI ITELPSTVVH LRRLVRLLID ASVKLPDGIG KMECLQEISL VGISKSPNFL KELGSLTELR ILQISESTGA
0701: WHDSYENTLI DSLCNLHKIC DLYIHGCKLS TEFISNIRCS PRYLRYLSCG QLSILPRWIN SSLLSLSTID LILNVLRQDD LRSLGALQSL CCLRLNVFKI
0801: EPERLVVGTE HAKFHWLAEF SFTTNAMGLI FSQYSMPRLE NLELAFNVRE TKYFDIGLEH LSSLKDVTAR IDCRDSSIFE VQNADAAIRR IAYMNSNQPK
0901: VHVIRHYEHM LMDEVKIQKE TEEEKEILEN RIGPWGGNGG VTCDIKVAPK RLESITICSG IIIDALAFSY LDKDGERHTT SLWGGLGGSV QLIDLDEREF
1001: LMEVIGTVGP FNVLSEAITS LTLVTNVRSY GPFGQPQGTP FRTPRKKNSC IVGFFGRSGT YLDAVGVYFH PM

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.