Factsheet for TraesCS1D01G006000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G542300.1	Wheat	cytosol	50.27	67.08
TraesCS1D01G006300.1	Wheat	cytosol	51.86	62.06
TraesCS7D01G099900.1	Wheat	cytosol	30.77	59.95
TraesCS7D01G099800.1	Wheat	cytosol	38.2	58.18
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	48.41	58.03
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	48.41	58.03
TraesCS7D01G106200.2	Wheat	cytosol	21.62	57.6
Os10t0124400-00	Rice	cytosol	21.35	57.09
Os01t0603100-01	Rice	extracellular	40.72	55.92
TraesCS3D01G541500.1	Wheat	cytosol	10.61	55.17
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	19.89	53.76
TraesCS3D01G474200.1	Wheat	cytosol	35.94	53.56
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	11.67	51.76
TraesCS1D01G032200.2	Wheat	cytosol	65.78	51.67
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	17.11	50.39
TraesCS3D01G021900.1	Wheat	cytosol	32.76	48.62
TraesCS2D01G574300.1	Wheat	cytosol	35.15	45.61
TraesCS3D01G460000.1	Wheat	cytosol	35.54	45.58
TraesCS3D01G473700.1	Wheat	plasma membrane	54.91	45.39
TraesCS7D01G106100.2	Wheat	cytosol	55.3	45.03
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	54.64	44.83
TraesCS7D01G006300.1	Wheat	cytosol	32.76	44.03
TraesCS1D01G396500.1	Wheat	cytosol	16.31	43.93
TraesCS2D01G590900.1	Wheat	cytosol	33.42	42.0
TraesCS2D01G574500.1	Wheat	cytosol	19.1	41.86
TraesCS3D01G474000.2	Wheat	extracellular, plasma membrane	54.51	41.56
TraesCS2D01G028200.2	Wheat	cytosol	16.58	41.12
TraesCS1D01G005900.1	Wheat	cytosol	20.42	39.19
TraesCS7D01G005200.1	Wheat	cytosol	16.98	39.14
TraesCS1D01G267200.1	Wheat	cytosol	44.56	38.75
TraesCS1D01G029200.3	Wheat	cytosol	48.54	38.41
TraesCS2D01G028300.1	Wheat	cytosol	48.01	38.31
TraesCS1D01G028600.1	Wheat	plasma membrane	48.54	38.09
TraesCS2D01G591300.1	Wheat	cytosol	37.27	38.02
TraesCS2D01G003200.1	Wheat	cytosol	49.6	37.47
TraesCS1D01G028200.1	Wheat	cytosol	47.61	37.47
TraesCS5D01G344600.1	Wheat	cytosol	47.48	37.06
TraesCS7D01G429600.1	Wheat	cytosol	38.59	36.74
TraesCS6D01G100300.1	Wheat	cytosol	44.56	36.01
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	48.01	35.95
TraesCS7D01G106300.1	Wheat	cytosol	28.51	35.54
TraesCS1D01G029100.2	Wheat	cytosol	46.95	35.33
TraesCS2D01G574400.1	Wheat	cytosol	44.96	35.13
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	40.85	34.3
TraesCS7D01G105600.1	Wheat	cytosol	26.26	34.02
TraesCS2D01G503500.1	Wheat	cytosol	24.27	33.46
TraesCS2D01G590700.1	Wheat	cytosol	36.6	33.21
TraesCS1D01G005300.1	Wheat	cytosol	39.26	33.07
TraesCS1D01G006800.1	Wheat	cytosol	42.31	33.02
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	43.37	32.8
TraesCS3D01G082100.1	Wheat	cytosol	39.26	32.1
TraesCS4D01G315100.1	Wheat	plasma membrane	38.33	32.0
TraesCS2D01G028400.1	Wheat	plastid	40.19	31.83
TraesCS2D01G575000.1	Wheat	cytosol	33.69	31.63
TraesCS2D01G591200.1	Wheat	cytosol	22.94	31.63
TraesCS2D01G590800.2	Wheat	extracellular	36.21	31.45
TraesCS6D01G012700.1	Wheat	plasma membrane	41.25	30.82
TraesCS1D01G028700.1	Wheat	cytosol	22.55	30.63
TraesCS7D01G538200.2	Wheat	cytosol	39.52	30.63
TraesCS7D01G006800.1	Wheat	cytosol	26.66	30.23
TraesCS7D01G429500.1	Wheat	cytosol	30.9	29.95
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	41.11	29.67
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	44.3	29.66
TraesCS5D01G021700.1	Wheat	cytosol	41.91	29.37
TraesCS7D01G008200.1	Wheat	cytosol	24.67	29.15
TraesCS6D01G013000.1	Wheat	cytosol	38.86	28.98
TraesCS2D01G057600.1	Wheat	cytosol	41.11	28.65
TraesCS6D01G012600.2	Wheat	cytosol	38.86	28.64
TraesCS2D01G069600.2	Wheat	extracellular	40.72	28.14
TraesCS2D01G601200.1	Wheat	cytosol	39.26	27.33
TraesCS2D01G503400.1	Wheat	cytosol	3.71	4.84

Protein Annotations

EnsemblPlants:TraesCS1D01G006000.1	EnsemblPlantsGene:TraesCS1D01G006000	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52047	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr1D:+:2716952..2719525

Molecular Weight (calculated)

85351.1 Da

IEP (calculated)

5.994

GRAVY (calculated)

-0.184

Length

754 amino acids

Sequence
(BLAST)

001: MDVASGALIP LINKLRSLLV DEYNLEKRVK KGVKSLITEL EMMHAVLRKI GAKPPEQFDE QVLIWAGKVR DLSYNMEDAV DAFIVRGEED GHDGGSTNMR
101: NRIKKFLRKT TKLFTKGKAL HQISDAIEEA QRLAKELGEL RQRYMIEAHA NGSRDAIDPR LKAVYKDVTE LVGIDHVRDD LTEKLCDCDE RSKDHLRTMS
201: IVGFGGLGKT TLAKAVYDKI KVEFDSVAFV SVSQNPDMTK IFKKLLYELD KSKYATINEA ARDEGQLLDD LRIFLQDRRY LIVIDDIWDE EAWEFIKCAF
301: FDNCLGSRVM TTTRIGSISK ACCSSCDDII YQMNPLTDDD SQRLFYKRIF PHGSNCPAEL ELVSREILKK CGGVPLAIIT IASILARNGQ DLQIEPKYHW
401: DNILGSIGRG LTEGGSAKDM QRILSFSYYD LPSHLKTCLL YLSLFPEDFE IRRDRLIWMW IAEGFVQGGE QETGLFELRE SYFNELANRN LIQPVDVDAA
501: GSAEACRVHD MVLDLLCSLS SEQNFATIVD GTHQSNLISH RKSRRLSFQN SMSEPTNHWV NATSMPQVRS IVLFRTNTDL IQTISCFQVL RVLDLEGCDL
601: GRNHHSIDPR HIENLLHLRY LGLRGTSVRE LPVEIGKLQL LEILDLAITV AVIPSSVVRL RRLICLNAPN SVLPAGIGDL TSLEELAGKL VDVKELGQLV
701: KLRVLLLYWN ENDESMCNYL VESLGKLRKM QSLTISCLGD ARFDVSWDGW VPTP

Best Arabidopsis Sequence Match ( AT5G35450.1 )
(BLAST)

001: MAEGVVSFGV QKLWALLNRE SERLNGIDEQ VDGLKRQLRG LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKNHVRRLAC
101: FLTDRHKVAS DIEGITKRIS KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI DNIQVVSISG MGGIGKTTLA
201: RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
301: EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN
401: SVYRILSLSY EDLPTDLKHC FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR LKLCQMHDMM REVCISKAKV
501: ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
601: HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT
701: FENLSSSLRQ FRKLETLSFI YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI LEKLLHLKSV ELRRKAFIGR
801: RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
901: E

Arabidopsis Description

RPP8L3Disease resistance RPP8-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.