Factsheet for TraesCS6D01G013100.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

endoplasmic reticulum 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, endoplasmic reticulum
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	79.33	92.32
TraesCS6B01G016100.1	Wheat	cytosol	80.57	78.69
TraesCS6B01G016500.1	Wheat	cytosol	80.19	78.24
TraesCS6D01G012600.2	Wheat	cytosol	74.74	76.34
TraesCS6D01G013000.1	Wheat	cytosol	73.11	75.57
Os11t0588600-01	Rice	cytosol, plasma membrane	14.83	56.78
TraesCS6D01G012700.1	Wheat	plasma membrane	51.48	53.32
TraesCS1D01G396500.1	Wheat	cytosol	13.68	51.07
TraesCS7D01G006300.1	Wheat	cytosol	27.18	50.62
Zm00001d004772_P006	Maize	cytosol	49.38	50.15
Zm00001d004771_P001	Maize	cytosol	49.28	50.05
TraesCS3D01G021900.1	Wheat	cytosol	24.02	49.41
Os11t0588400-01	Rice	cytosol	40.67	46.65
TraesCS2D01G028200.2	Wheat	cytosol	13.49	46.38
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	11.29	46.09
TraesCS7D01G005200.1	Wheat	cytosol	14.35	45.87
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	27.46	45.63
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	27.46	45.63
TraesCS3D01G460000.1	Wheat	cytosol	25.55	45.41
TraesCS7D01G099900.1	Wheat	cytosol	16.65	44.96
Os11t0590700-01	Rice	cytosol	36.46	44.61
TraesCS2D01G590900.1	Wheat	cytosol	24.88	43.33
TraesCS1D01G005900.1	Wheat	cytosol	16.27	43.26
TraesCS7D01G106200.2	Wheat	cytosol	11.67	43.11
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	11.48	43.01
TraesCS7D01G429600.1	Wheat	cytosol	32.34	42.68
TraesCS3D01G082100.1	Wheat	cytosol	37.32	42.3
TraesCS7D01G099800.1	Wheat	cytosol	19.9	42.02
TraesCS1D01G006000.1	Wheat	cytosol	29.67	41.11
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	35.89	40.81
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	6.6	40.59
TraesCS3D01G474200.1	Wheat	cytosol	19.62	40.51
TraesCS2D01G574300.1	Wheat	cytosol	22.49	40.45
TraesCS7D01G542300.1	Wheat	cytosol	21.82	40.35
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	38.18	40.02
TraesCS7D01G006800.1	Wheat	cytosol	25.36	39.85
TraesCS3D01G473700.1	Wheat	plasma membrane	34.64	39.69
Os07t0294100-00	Rice	cytosol	26.41	39.04
TraesCS2D01G574500.1	Wheat	cytosol	12.82	38.95
TraesCS7D01G429500.1	Wheat	cytosol	29.0	38.95
TraesCS7D01G008200.1	Wheat	cytosol	23.73	38.87
TraesCS2D01G028300.1	Wheat	cytosol	35.12	38.84
TraesCS1D01G029200.3	Wheat	cytosol	35.31	38.72
TraesCS2D01G591300.1	Wheat	cytosol	27.08	38.3
TraesCS3D01G474000.2	Wheat	extracellular, plasma membrane	36.17	38.22
TraesCS2D01G503500.1	Wheat	cytosol	20.0	38.21
TraesCS7D01G106100.2	Wheat	cytosol	33.68	38.01
TraesCS2D01G591200.1	Wheat	cytosol	19.81	37.84
TraesCS1D01G028200.1	Wheat	cytosol	34.64	37.79
TraesCS1D01G006300.1	Wheat	cytosol	22.78	37.78
TraesCS1D01G267200.1	Wheat	cytosol	31.29	37.72
TraesCS1D01G028600.1	Wheat	plasma membrane	34.45	37.46
TraesCS1D01G029100.2	Wheat	cytosol	35.89	37.43
TraesCS5D01G344600.1	Wheat	cytosol	34.55	37.37
TraesCS3D01G541500.1	Wheat	cytosol	5.17	37.24
TraesCS4D01G315100.1	Wheat	plasma membrane	32.15	37.21
TraesCS1D01G032200.2	Wheat	cytosol	33.88	36.88
Os11t0590900-00	Rice	cytosol	14.83	36.82
TraesCS1D01G006800.1	Wheat	cytosol	33.68	36.44
TraesCS6D01G100300.1	Wheat	cytosol	32.25	36.12
TraesCS7D01G538200.2	Wheat	cytosol	33.4	35.87
TraesCS2D01G003200.1	Wheat	cytosol	34.16	35.77
TraesCS2D01G590700.1	Wheat	cytosol	28.13	35.38
TraesCS2D01G069600.2	Wheat	extracellular	36.55	35.01
TraesCS2D01G590800.2	Wheat	extracellular	29.0	34.91
TraesCS1D01G005300.1	Wheat	cytosol	29.86	34.86
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	33.4	34.66
TraesCS2D01G575000.1	Wheat	cytosol	26.22	34.12
TraesCS7D01G106300.1	Wheat	cytosol	19.62	33.88
TraesCS2D01G574400.1	Wheat	cytosol	30.53	33.06
TraesCS7D01G105600.1	Wheat	cytosol	18.28	32.82
TraesCS5D01G021700.1	Wheat	cytosol	33.49	32.53
TraesCS1D01G028700.1	Wheat	cytosol	17.03	32.07
TraesCS2D01G028400.1	Wheat	plastid	28.8	31.62
TraesCS2D01G057600.1	Wheat	cytosol	32.73	31.61
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	35.02	31.55
TraesCS2D01G601200.1	Wheat	cytosol	30.33	29.27
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	26.22	24.33
TraesCS2D01G503400.1	Wheat	cytosol	8.42	15.2

Protein Annotations

EnsemblPlants:TraesCS6D01G013100.1	EnsemblPlantsGene:TraesCS6D01G013100	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF23	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52047	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:5194271..5198817

Molecular Weight (calculated)

117935.0 Da

IEP (calculated)

5.079

GRAVY (calculated)

-0.254

Length

1045 amino acids

Sequence
(BLAST)

0001: MEFATGALGT LLPKLGELLL DEYNLQKGLK KGIKDLMDEL LVIQAVLLKV SNVPLDQLDP QVKIWANDVR ELSFAIEDSL DSFMVRVEGV EPTKPHTFFG
0101: FIKKTCKKVT KLKIRREIAN DIKDVKIQVK EVKERFDRYK DVIGNTNART EVDPRLLAMY TKVSDLIGIE MSTDELTERL SKGHDPSGET LKVVSVVGFG
0201: GLGKTTLAKA VYDKLNKNFD CGVFVPVGQN PDTKKVLRDI LLELDRQLYR DASTMDERQL INQLQTFLVG KRYFIVIDDI WDTPTWEMIN CAFMDSHPES
0301: RIIITTRDFD VATKAGGIYR MEPLSDDNSK MLFYTRTFGG EGASSDNQPA EVTNKILKKC GGVPLAIITI ASLLVGKRCE DWSKVYDAIG FGHEDNKVVH
0401: NTRKILSFSY YDLPSHLKSC LLYLSMFPED SLIGKRTLIW RWVCEGFVVD REGIGSFELG EIYFNELVNK SMIRWIDEEN YGQGGCRVHD MVLDLIRTIS
0501: NDINFVTVHD MEQHGTSLRG QQTNRVHRLA LHGRSVEHNS SIAMEHLRSF NVVGCSANSM PLLLSFKVLR VLVIEDCVFS VGSSLEHLGK LVQLRYLGLV
0601: KTAVKIPEGI GHDLKFLEIL DVRGGLISEL PPSVGELMNL RCLWADKGTV MKGEIGKLTC LEELELYSVE KCPNFCTEVG KLTTLRVLKI YFAEIEESAG
0701: KALMESLCNL HNIHSLTVLD DADDGKYSIV LNHSLEDLAC TKLHELALLS IVIPRVPSWI NHLSVPLLSH LGLHVAAVEV GDVQTIGRLP SLLVLLLWSK
0801: DEKNISYTFG SNEFHKLRVL WTKKIEIAVG EGALPMLEVL EYRASAERKD AASLVPWRRN SCPLLKFVGC FLDCTNSSYR EVKEAKQALR QASGTRPNAV
0901: YLDLYIEEEN YDVEAGKFID NLEWTLRGLD RPEDVGRAAA HQEERTRRMI RSLERRLRDA AEPRVGRYGQ QEIRGLVAKF KRWLHDHAGT DQDEAGKSDD
1001: DEDYYYGDDD DGTDQDDQDD DDDYGTDQAE VDDCEAESTC SDDCN

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.