Factsheet for TraesCS6B01G016100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G016500.1	Wheat	cytosol	81.59	81.51
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	68.13	81.18
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	78.69	80.57
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	30.93	67.55
TraesCS5B01G032500.1	Wheat	cytosol	18.5	63.46
Os11t0588600-01	Rice	cytosol, plasma membrane	14.11	55.31
TraesCS7B01G416600.3	Wheat	cytosol	45.7	50.83
TraesCS6B01G004600.1	Wheat	cytosol	22.52	49.49
TraesCS6B01G016600.1	Wheat	cytosol	37.57	49.26
Zm00001d004772_P006	Maize	cytosol	47.29	49.17
Zm00001d004771_P001	Maize	cytosol	47.29	49.17
TraesCS6B01G004900.1	Wheat	cytosol	14.77	48.62
TraesCS2B01G084900.1	Wheat	cytosol	16.07	47.51
TraesCS1B01G277900.1	Wheat	cytosol	13.36	46.89
TraesCS1B01G035400.1	Wheat	cytosol	14.11	46.75
TraesCS1B01G278000.1	Wheat	cytosol	10.19	45.99
Os11t0588400-01	Rice	cytosol	38.88	45.66
TraesCS7B01G496000.1	Wheat	cytosol	12.06	45.26
TraesCS1B01G036200.1	Wheat	cytosol	10.19	44.86
TraesCS1B01G035600.1	Wheat	cytosol	22.99	44.57
TraesCS5B01G360100.2	Wheat	cytosol	22.71	44.42
Os11t0590700-01	Rice	cytosol	35.23	44.15
TraesCS2B01G039500.1	Wheat	cytosol	10.19	43.95
TraesCS7B01G339100.1	Wheat	cytosol	25.23	43.76
TraesCS6B01G000200.1	Wheat	cytosol	12.43	43.46
TraesCS1B01G012500.1	Wheat	cytosol	37.01	43.28
TraesCS7B01G008700.1	Wheat	cytosol	21.21	42.75
TraesCS1B01G034600.1	Wheat	cytosol	10.93	42.7
TraesCS2B01G039400.1	Wheat	cytosol	16.73	42.42
TraesCS3B01G096900.1	Wheat	cytosol	35.61	41.32
TraesCS5B01G032600.1	Wheat	cytosol	24.11	41.28
TraesCS3B01G522400.1	Wheat	extracellular	27.01	40.53
TraesCS7B01G009100.1	Wheat	cytosol	22.43	40.47
TraesCS7B01G009000.1	Wheat	cytosol	12.71	40.0
TraesCS1B01G000300.1	Wheat	cytosol	10.47	39.58
TraesCS7B01G479900.1	Wheat	endoplasmic reticulum, plasma membrane	30.93	39.55
TraesCS3B01G522500.1	Wheat	cytosol	33.55	38.89
TraesCS3B01G522600.1	Wheat	cytosol, extracellular, plasma membrane	33.27	38.78
TraesCS2B01G039100.1	Wheat	cytosol	33.83	38.51
TraesCS3B01G522800.1	Wheat	cytosol	31.59	38.45
TraesCS2B01G071200.1	Wheat	cytosol	23.64	38.28
Os07t0294100-00	Rice	cytosol	25.14	38.05
TraesCS7B01G008600.1	Wheat	cytosol	33.18	38.01
TraesCS1B01G002500.1	Wheat	peroxisome	29.44	37.91
TraesCS2B01G039600.1	Wheat	cytosol	33.18	37.69
TraesCS1B01G034500.1	Wheat	cytosol	33.55	37.67
TraesCS3B01G522700.1	Wheat	cytosol	32.9	37.65
TraesCS7B01G008500.1	Wheat	cytosol	31.4	37.63
TraesCS2B01G038800.1	Wheat	cytosol	32.99	37.59
TraesCS2B01G084300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	33.74	37.29
TraesCS1B01G035500.1	Wheat	cytosol	33.93	37.27
TraesCS1B01G000500.1	Wheat	cytosol	32.52	37.22
TraesCS1B01G002900.2	Wheat	cytosol	32.24	37.02
TraesCS6B01G000100.1	Wheat	cytosol	36.36	36.84
TraesCS3B01G523300.1	Wheat	cytosol, plasma membrane	32.8	36.72
TraesCS3B01G523400.1	Wheat	plasma membrane	29.07	36.63
TraesCS1B01G035700.1	Wheat	cytosol	32.71	36.57
TraesCS1B01G035200.1	Wheat	cytosol, extracellular, plastid	32.62	36.54
TraesCS2B01G037900.1	Wheat	cytosol	32.34	36.31
TraesCS5B01G237200.1	Wheat	cytosol	30.93	36.21
TraesCS2B01G038100.2	Wheat	cytosol	32.06	36.14
TraesCS3B01G523000.1	Wheat	extracellular, plasma membrane	31.31	36.1
TraesCS2B01G608500.1	Wheat	cytosol	27.94	36.07
TraesCS7B01G008800.1	Wheat	cytosol	28.69	35.74
TraesCS7B01G339200.1	Wheat	cytosol	32.9	35.63
Os11t0590900-00	Rice	cytosol	13.93	35.39
TraesCS2B01G625500.1	Wheat	cytosol	30.09	34.77
TraesCS3B01G607700.1	Wheat	cytosol	21.78	34.42
TraesCS2B01G625400.1	Wheat	cytosol	29.91	34.37
TraesCS2B01G608800.2	Wheat	cytosol	28.6	34.15
TraesCS4B01G318600.1	Wheat	cytosol	23.27	33.74
TraesCS2B01G608000.1	Wheat	cytosol	28.5	33.74
TraesCS5B01G093300.1	Wheat	cytosol	29.63	33.47
TraesCS2B01G038900.1	Wheat	cytosol	31.12	33.47
TraesCS5B01G014000.1	Wheat	cytosol	32.52	32.31
TraesCS2B01G085000.1	Wheat	cytosol, endoplasmic reticulum, extracellular	34.21	32.25
TraesCS7B01G008900.1	Wheat	cytosol	31.78	30.91
TraesCS1B01G034700.1	Wheat	cytosol	18.69	30.77
TraesCS5B01G540000.2	Wheat	endoplasmic reticulum, extracellular, golgi	28.41	30.61
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	32.8	30.26
TraesCS2B01G070900.1	Wheat	cytosol	30.09	28.7
TraesCS2B01G597700.2	Wheat	cytosol	21.59	27.47
TraesCS4B01G345900.1	Wheat	extracellular	19.72	20.19

Protein Annotations

EnsemblPlants:TraesCS6B01G016100.1	EnsemblPlantsGene:TraesCS6B01G016100	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF23	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6B:-:9785718..9791329

Molecular Weight (calculated)

121127.0 Da

IEP (calculated)

5.875

GRAVY (calculated)

-0.189

Length

1070 amino acids

Sequence
(BLAST)

0001: MQFATGAMSS LLPKLGELLK EEYNLQKRLK KGIRDLKDEL LVIEVALLKV SDVPLDKLDP LVKIWANDVR ELSYAIEDSL DSFMVRVEGV EPTKPHTFFG
0101: FIKKTCKKAT KLKIRRKIAN DINDVKIQVK EVKERYDRYK DVIGNTNAKT EVDPRLLAMC SKVSDLVGIE KSMDEITERL SKGDDPSSEK LKVVSVVGFG
0201: GLGKTTLAKA VYDKLKKNFD CWVFVPVGQS PDTKKVLRDV LLQLDMELYK ASATMDEWQL INQLQTFLVG KRYIFVMDDI WDIRTWEVIK CAFMDSHPES
0301: RLIITTRIVD VATKAGGIYN MEELSNDNSE ILFYTRTCGG EGLNSSNQHV EVTNKILKKC GGVPLAIITI ASLLVGKQSE DWSKVYDAIG FGHEDSEVVQ
0401: NTRKILSFSY YDLPSHLKTC LLYLSMFPED SFIEKNSLIW KWVSDGFVPD RSFQLGESYF SMLVNRSMIR WIDDSDYVGG QSGCRVHDMV LDLIRTISNE
0501: VNFVTVHDME HHGTCLGGKS TNKVRRLAVH GKSGEHNCSI AMEHVRSFNV VECSANSIPL LLSFKVLRVL VIEDCVFSEG SSLEHLGKLV QLRYLGLVKT
0601: AVKIPEGIGH DLKFLEILDV RGGLISELPA SVGELMNLRC LWADQGTVMK GEIGKLKYLE ELQLYSVEKC PNFFTEVGKL TNLRVLKIYF GEIEESAGKS
0701: LMESLCNMQK IHNLMIVDDD RGAKYSVVVN HSLEDFAPCT KLFELLLPII VIPRVPSWIN QLTVPLLSHL CLHVDAVEVR DVQTIGRLPS LLVLFLWSTD
0801: DNNISYTFGS NVFHKMRWLW TKKIKIAVGE GALPMLERML YSASAERKDA ASLVPWGRNS CPLLKYVICY LDCTNSSYRE VEEAKQALMQ ASGTRPNAVY
0901: LDLDIEEENY DEEAGKFIDN LEWILRGLDR PEDMGRPPAH QEGRTRRMIR SLERRLHDAA EPRVGRYGQQ EIRGLVTKFK SWLHDHAGTD QDEAGNSDDD
1001: DDEDYYYDDD DGTDQAEWGR GGGGGQPTLN LFLRSCLCLS FFPTYIHMCP LFILASGGCH LTNYSSHFVF

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.