Factsheet for TraesCS2B01G038800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G004070.4	Barley	cytosol	50.37	82.4
TraesCS2B01G039500.1	Wheat	cytosol	19.81	75.0
TraesCS2B01G039100.1	Wheat	cytosol	74.76	74.68
TraesCS1B01G278000.1	Wheat	cytosol	18.53	73.42
TraesCS1B01G277900.1	Wheat	cytosol	23.64	72.79
TraesCS2B01G039400.1	Wheat	cytosol	30.88	68.72
TraesCS2B01G038100.2	Wheat	cytosol	64.11	63.44
TraesCS2B01G037900.1	Wheat	cytosol	63.15	62.22
TraesCS2B01G039600.1	Wheat	cytosol	61.87	61.68
TraesCS5B01G360100.2	Wheat	cytosol	35.36	60.69
TraesCS1B01G035400.1	Wheat	cytosol	20.66	60.06
TraesCS1B01G035600.1	Wheat	cytosol	35.25	59.96
TraesCS1B01G036200.1	Wheat	cytosol	14.7	56.79
TraesCS2B01G038900.1	Wheat	cytosol	58.68	55.38
TraesCS1B01G034600.1	Wheat	cytosol	15.76	54.01
TraesCS6B01G004900.1	Wheat	cytosol	18.64	53.85
TraesCS1B01G035200.1	Wheat	cytosol, extracellular, plastid	53.57	52.67
TraesCS1B01G034500.1	Wheat	cytosol	52.72	51.94
TraesCS1B01G035700.1	Wheat	cytosol	52.82	51.83
TraesCS2B01G084900.1	Wheat	cytosol	19.91	51.66
TraesCS7B01G008700.1	Wheat	cytosol	28.86	51.04
TraesCS1B01G035500.1	Wheat	cytosol	52.08	50.21
TraesCS6B01G000200.1	Wheat	cytosol	16.29	50.0
TraesCS6B01G004600.1	Wheat	cytosol	25.77	49.69
TraesCS7B01G496000.1	Wheat	cytosol	15.02	49.47
TraesCS7B01G009100.1	Wheat	cytosol	30.56	48.4
TraesCS5B01G032500.1	Wheat	cytosol	15.76	47.44
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	23.96	45.92
TraesCS7B01G009000.1	Wheat	cytosol	16.61	45.88
TraesCS1B01G034700.1	Wheat	cytosol	30.99	44.77
TraesCS1B01G002500.1	Wheat	peroxisome	39.4	44.52
TraesCS3B01G522400.1	Wheat	extracellular	33.65	44.32
TraesCS7B01G339100.1	Wheat	cytosol	28.97	44.08
TraesCS7B01G008600.1	Wheat	cytosol	43.34	43.58
TraesCS3B01G522500.1	Wheat	cytosol	42.7	43.45
TraesCS3B01G522600.1	Wheat	cytosol, extracellular, plasma membrane	42.07	43.03
TraesCS7B01G479900.1	Wheat	endoplasmic reticulum, plasma membrane	38.23	42.89
TraesCS7B01G008500.1	Wheat	cytosol	40.79	42.89
TraesCS1B01G000500.1	Wheat	cytosol	42.7	42.89
TraesCS3B01G523300.1	Wheat	cytosol, plasma membrane	43.56	42.78
TraesCS3B01G522800.1	Wheat	cytosol	40.04	42.78
TraesCS1B01G000300.1	Wheat	cytosol	12.89	42.76
TraesCS1B01G012500.1	Wheat	cytosol	41.43	42.51
TraesCS7B01G008800.1	Wheat	cytosol	38.87	42.49
TraesCS1B01G002900.2	Wheat	cytosol	41.96	42.27
TraesCS3B01G523000.1	Wheat	extracellular, plasma membrane	41.75	42.24
TraesCS2B01G625400.1	Wheat	cytosol	41.43	41.78
TraesCS3B01G522700.1	Wheat	cytosol	41.11	41.28
TraesCS3B01G607700.1	Wheat	cytosol	29.61	41.06
TraesCS2B01G625500.1	Wheat	cytosol	40.26	40.82
TraesCS3B01G523400.1	Wheat	plasma membrane	36.21	40.05
TraesCS2B01G071200.1	Wheat	cytosol	28.01	39.79
TraesCS3B01G096900.1	Wheat	cytosol	38.98	39.7
TraesCS2B01G084300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	40.15	38.95
TraesCS4B01G318600.1	Wheat	cytosol	30.35	38.62
TraesCS5B01G237200.1	Wheat	cytosol	36.63	37.64
TraesCS2B01G608500.1	Wheat	cytosol	33.01	37.39
Os11t0657900-00	Rice	cytosol	40.79	37.18
TraesCS7B01G339200.1	Wheat	cytosol	38.87	36.94
TraesCS6B01G016600.1	Wheat	cytosol	31.95	36.76
TraesCS6B01G000100.1	Wheat	cytosol	41.32	36.74
TraesCS7B01G416600.3	Wheat	cytosol	37.27	36.38
TraesCS5B01G093300.1	Wheat	cytosol	36.21	35.9
TraesCS7B01G008900.1	Wheat	cytosol	41.75	35.64
TraesCS2B01G608800.2	Wheat	cytosol	33.76	35.38
TraesCS2B01G608000.1	Wheat	cytosol	33.44	34.73
TraesCS5B01G014000.1	Wheat	cytosol	39.62	34.54
TraesCS6B01G016500.1	Wheat	cytosol	38.02	33.33
TraesCS5B01G540000.2	Wheat	endoplasmic reticulum, extracellular, golgi	35.25	33.33
TraesCS2B01G085000.1	Wheat	cytosol, endoplasmic reticulum, extracellular	40.26	33.3
TraesCS5B01G032600.1	Wheat	cytosol	22.04	33.12
TraesCS6B01G016100.1	Wheat	cytosol	37.59	32.99
TraesCS2B01G597700.2	Wheat	cytosol	27.9	31.15
TraesCS2B01G070900.1	Wheat	cytosol	34.72	29.06
TraesCS4B01G345900.1	Wheat	extracellular	23.75	21.34

Protein Annotations

EnsemblPlants:TraesCS2B01G038800.1	EnsemblPlantsGene:TraesCS2B01G038800	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52047	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2B:-:17926106..17930889

Molecular Weight (calculated)

105542.0 Da

IEP (calculated)

6.957

GRAVY (calculated)

-0.142

Length

939 amino acids

Sequence
(BLAST)

001: MDLATGAMGT LLPKLAELLS KEYKLQKGVK EGVRSLEEEM RSMQAVLQVV GEVPRDQLDV QVKLWAGEVR ELSFKMEDVV DKFLVHVDDG SQPAGKLNKL
101: KRLTKKMASL FTKGKDRHDI AHAITDINKQ VKVIAERRAR YNLDNIVIRP AAVTVNPLLQ ALYTEMTELV GIDGKRDQVL MKLLSNEDNV SKQKLKIVSV
201: VGFGGLGKTT LVKAVYDKIK GDFDCRAFVS VGRKAEPRKV LMDILIDLDV GGSQLTLLDE TQLIKKLREY LDRKRYLVVI DDIWDAKLWT VINYAFSKGN
301: NAGSRLITTT RIVDVSKLCC SSTNDSVYQM EPLSDDDSKR LFHKRIFSQE NGCPRDFEEV SRDILKKCGG VPLAIITIAS VLASDQKVNS HDEWHILLES
401: IGRGLIEHPS IEEMLRILSF SYYDLPSHLK TCLLYLSMFP EDTRIEKDQL IWMWIAERFI QCETTTSSMF QIGETYFNEI VNRSLLQPVY DGHGIVHACR
501: VHDSVLDLIC LLSREENFVS VLNGSISSQG NVRRLSLQKI TEEEHETTPL ESVNMLQLRS IATFEPAISL MSRLSSFAVL RVLNLSTCAL GDHNLQGLWS
601: LVHLRYLGLS NTGLCELPEE VGKLQFLQVL DVSRNRGIER LPSSVTKLRR LMCLLYEERC NQLPDGIGNL TAMEELSCIH ADSLSIVKEI GNMKRLRKFE
701: ILFEQMSLEL EEAFAKSLEE MSNVQSVTIR IKNGGSKMMD LLGEKWVPPQ GLRELISHGK KGCKFSRLPA WIRENPSHLS HLSNLQICVK EVQQVDVGLL
801: GRLPALHTLA LQSLRQGLLL VNADGFRCVT IFCLWSNSPG QVIFQPGALP KAVMVLLHVG LQVSKQEAAG DDGDLFDMGI GNLPSLRSVN VKFKFCPSLP
901: RRDVKKANSA LGTALRAHPN RPSYASVQDD DSDDDDEWE

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.