Factsheet for TraesCS1B01G012500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G004600.1	Wheat	cytosol	31.04	58.32
TraesCS6B01G004900.1	Wheat	cytosol	20.44	57.54
TraesCS2B01G084900.1	Wheat	cytosol	21.86	55.25
TraesCS1B01G277900.1	Wheat	cytosol	17.92	53.77
TraesCS7B01G339100.1	Wheat	cytosol	35.96	53.32
TraesCS6B01G000200.1	Wheat	cytosol	17.38	51.96
TraesCS1B01G035400.1	Wheat	cytosol	18.14	51.39
TraesCS1B01G036200.1	Wheat	cytosol	13.55	51.03
TraesCS7B01G496000.1	Wheat	cytosol	15.85	50.88
TraesCS5B01G360100.2	Wheat	cytosol	30.38	50.82
TraesCS1B01G278000.1	Wheat	cytosol	13.01	50.21
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	26.89	50.2
TraesCS1B01G035600.1	Wheat	cytosol	29.73	49.28
TraesCS5B01G032500.1	Wheat	cytosol	16.61	48.72
TraesCS3B01G096900.1	Wheat	cytosol	48.42	48.05
TraesCS2B01G039500.1	Wheat	cytosol	12.9	47.58
TraesCS1B01G034600.1	Wheat	cytosol	14.21	47.45
TraesCS2B01G039400.1	Wheat	cytosol	20.87	45.26
TraesCS6B01G000100.1	Wheat	cytosol	51.69	44.79
TraesCS7B01G339200.1	Wheat	cytosol	48.31	44.74
TraesCS7B01G008700.1	Wheat	cytosol	25.79	44.44
TraesCS2B01G084300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	46.56	44.01
TraesCS3B01G522400.1	Wheat	extracellular	34.1	43.76
TraesCS7B01G009100.1	Wheat	cytosol	28.2	43.51
TraesCS3B01G522500.1	Wheat	cytosol	43.06	42.69
TraesCS3B01G522600.1	Wheat	cytosol, extracellular, plasma membrane	42.62	42.48
TraesCS2B01G039600.1	Wheat	cytosol	43.61	42.36
TraesCS1B01G034500.1	Wheat	cytosol	44.04	42.29
TraesCS7B01G479900.1	Wheat	endoplasmic reticulum, plasma membrane	38.58	42.17
TraesCS2B01G037900.1	Wheat	cytosol	43.72	41.97
TraesCS3B01G523000.1	Wheat	extracellular, plasma membrane	42.51	41.92
TraesCS1B01G035500.1	Wheat	cytosol	44.48	41.79
TraesCS2B01G038100.2	Wheat	cytosol	43.28	41.73
TraesCS3B01G522800.1	Wheat	cytosol	40.0	41.64
TraesCS2B01G038800.1	Wheat	cytosol	42.51	41.43
TraesCS1B01G035700.1	Wheat	cytosol	43.06	41.17
TraesCS1B01G035200.1	Wheat	cytosol, extracellular, plastid	42.84	41.05
TraesCS1B01G002500.1	Wheat	peroxisome	37.27	41.03
TraesCS2B01G039100.1	Wheat	cytosol	42.08	40.96
TraesCS7B01G416600.3	Wheat	cytosol	43.06	40.96
TraesCS3B01G523400.1	Wheat	plasma membrane	37.92	40.87
TraesCS1B01G002900.2	Wheat	cytosol	41.53	40.77
TraesCS2B01G071200.1	Wheat	cytosol	29.4	40.7
TraesCS1B01G000300.1	Wheat	cytosol	12.57	40.64
TraesCS3B01G523300.1	Wheat	cytosol, plasma membrane	42.4	40.59
TraesCS1B01G000500.1	Wheat	cytosol	41.2	40.32
TraesCS5B01G032600.1	Wheat	cytosol	27.43	40.16
TraesCS7B01G008500.1	Wheat	cytosol	39.13	40.09
TraesCS2B01G625400.1	Wheat	cytosol	40.77	40.06
TraesCS7B01G009000.1	Wheat	cytosol	14.86	40.0
TraesCS3B01G522700.1	Wheat	cytosol	40.87	40.0
KXG21016	Sorghum	cytosol	38.91	40.0
TraesCS2B01G625500.1	Wheat	cytosol	40.33	39.85
TraesCS7B01G008600.1	Wheat	cytosol	40.66	39.83
TraesCS5B01G237200.1	Wheat	cytosol	39.45	39.5
TraesCS4B01G318600.1	Wheat	cytosol	31.58	39.16
TraesCS7B01G008800.1	Wheat	cytosol	36.72	39.12
TraesCS2B01G038900.1	Wheat	cytosol	42.08	38.69
TraesCS6B01G016600.1	Wheat	cytosol	34.32	38.48
TraesCS2B01G608500.1	Wheat	cytosol	34.86	38.48
TraesCS2B01G085000.1	Wheat	cytosol, endoplasmic reticulum, extracellular	47.21	38.06
TraesCS3B01G607700.1	Wheat	cytosol	28.09	37.96
TraesCS6B01G016100.1	Wheat	cytosol	43.28	37.01
TraesCS5B01G093300.1	Wheat	cytosol	37.92	36.64
TraesCS6B01G016500.1	Wheat	cytosol	42.4	36.23
TraesCS2B01G608800.2	Wheat	cytosol	35.3	36.05
TraesCS5B01G014000.1	Wheat	cytosol	41.42	35.19
TraesCS1B01G034700.1	Wheat	cytosol	24.92	35.08
TraesCS2B01G608000.1	Wheat	cytosol	34.1	34.51
TraesCS5B01G540000.2	Wheat	endoplasmic reticulum, extracellular, golgi	36.5	33.64
TraesCS7B01G008900.1	Wheat	cytosol	39.67	33.0
TraesCS2B01G597700.2	Wheat	cytosol	29.51	32.1
TraesCS2B01G070900.1	Wheat	cytosol	36.83	30.04
TraesCS4B01G345900.1	Wheat	extracellular	23.83	20.86

Protein Annotations

EnsemblPlants:TraesCS1B01G012500.1	EnsemblPlantsGene:TraesCS1B01G012500	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF23	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52047	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1B:+:6069735..6073999

Molecular Weight (calculated)

103297.0 Da

IEP (calculated)

6.603

GRAVY (calculated)

-0.147

Length

915 amino acids

Sequence
(BLAST)

001: MDLATGAMVS LLPKLSELLK EEHKLSKGVK KDVEFLSREL THMHVALHKV VRVPHDQELI GEVKLWADDA REVSYEMEDI IDSFLVPPVD SSAPADDPHT
101: RLKRITKKMA KLFKKDKTRD QLVADAIKDI KDKVQKVSDR PGRYDVAANL AVTTKVDPRL SAVYKDTEIV GVEEPRDELV KRLTGGEDGV SKDQLKILSI
201: FGFGGLGKTT LARAVYERLQ GQYVRDAFVA VGRNPDPKKV LMDILLQLDK NKNYKAHNLA MLDEIQLIDE LRGLLENKRY LIVIDDIWDI KAWEIIKCAF
301: MDSNCGSRII TTTRILEVAT ITGDVYKLKA LSHQKSEELF FTRLFGGKGE CPYDEPTELS EKVLHKCGGV PLAIITIASL LAGKPKEYWS EVYCSIGFGN
401: GDNEHVENTR IILSFSYYDL PGHLRTCLSY LSIYPEDYKI NKETLIWKWI AEGFIHEDSG IGLFELGERY FNELVNRSMV QPVEQDGAIY ACIVHDMVLD
501: MIRSLSNEKN FVIILDGTEE AATSSRINAR RLAIQKSIVE PHINLLSNTH LSQVRSFNAT GCRFSTPMTL SLSSFCALRV LAMERCTFTE GHLYQPEHVG
601: RLLQLRYLGL YSTRTLELPE EIGDLMLLQT PDLRFSGIKE LPCSIGRLRQ LKCLRADGES FRVPDWIGNL TSLEELSLHD VPASFMGELG KLTELRDLRF
701: RIQSIHPSLK QVLVDSLCNL KKIQVLQMNG PWFNDDPNWE AYVPTPQLRR LVLWFRFQRL PEWITPASLP NLSHLTVEVA SAAAHDVETL GRLPQLVSLD
801: FATPYDMIFP AVGGAMFPRL VSCGTHVPLR FLPGAMLGLE SVGCSVKVRH LKDAHMDLNL ALGSLRNLPS LQRVKVEIRS FGATDAEVEE TEAVLRHEVD
901: IHPNHPVLRL SLQKC

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.