Factsheet for TraesCS1B01G002900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G000300.1	Wheat	cytosol	25.32	83.39
TraesCS1D01G006300.1	Wheat	cytosol	55.47	82.06
TraesCS1B01G002500.1	Wheat	peroxisome	72.53	81.35
TraesCS1A01G004000.1	Wheat	cytosol	65.24	81.28
TraesCS1B01G000500.1	Wheat	cytosol	77.68	77.43
TraesCS7B01G479900.1	Wheat	endoplasmic reticulum, plasma membrane	56.33	62.72
Os10t0124400-00	Rice	cytosol	17.7	58.51
TraesCS7B01G008700.1	Wheat	cytosol	33.26	58.38
TraesCS7B01G009100.1	Wheat	cytosol	36.48	57.34
TraesCS7B01G009000.1	Wheat	cytosol	20.82	57.06
Os01t0603100-01	Rice	extracellular	33.37	56.65
TraesCS3B01G522600.1	Wheat	cytosol, extracellular, plasma membrane	51.72	52.51
TraesCS5B01G360100.2	Wheat	cytosol	30.79	52.47
TraesCS3B01G522500.1	Wheat	cytosol	51.93	52.44
TraesCS7B01G008600.1	Wheat	cytosol	51.39	51.28
TraesCS7B01G008800.1	Wheat	cytosol	47.0	50.99
TraesCS3B01G523000.1	Wheat	extracellular, plasma membrane	50.75	50.97
TraesCS3B01G522800.1	Wheat	cytosol	48.07	50.97
TraesCS7B01G008500.1	Wheat	cytosol	48.71	50.84
TraesCS3B01G607700.1	Wheat	cytosol	36.91	50.81
TraesCS3B01G522400.1	Wheat	extracellular	38.73	50.63
TraesCS1B01G035600.1	Wheat	cytosol	29.61	50.0
TraesCS3B01G522700.1	Wheat	cytosol	50.11	49.95
TraesCS3B01G523400.1	Wheat	plasma membrane	45.06	49.47
TraesCS3B01G523300.1	Wheat	cytosol, plasma membrane	50.11	48.85
TraesCS1B01G277900.1	Wheat	cytosol	15.56	47.54
TraesCS2B01G039400.1	Wheat	cytosol	21.24	46.92
TraesCS1B01G035400.1	Wheat	cytosol	16.2	46.75
TraesCS5B01G032500.1	Wheat	cytosol	15.45	46.15
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	24.03	45.71
TraesCS1B01G036200.1	Wheat	cytosol	11.91	45.68
TraesCS1B01G278000.1	Wheat	cytosol	11.59	45.57
TraesCS6B01G004900.1	Wheat	cytosol	15.88	45.54
TraesCS2B01G084900.1	Wheat	cytosol	17.38	44.75
TraesCS1B01G034600.1	Wheat	cytosol	13.09	44.53
TraesCS2B01G039600.1	Wheat	cytosol	44.85	44.37
TraesCS2B01G625400.1	Wheat	cytosol	44.31	44.36
TraesCS2B01G037900.1	Wheat	cytosol	44.96	43.97
TraesCS6B01G004600.1	Wheat	cytosol	22.85	43.74
TraesCS2B01G039500.1	Wheat	cytosol	11.48	43.15
TraesCS2B01G625500.1	Wheat	cytosol	42.49	42.76
TraesCS7B01G008900.1	Wheat	cytosol	50.32	42.64
TraesCS1B01G034500.1	Wheat	cytosol	43.35	42.39
TraesCS2B01G038100.2	Wheat	cytosol	43.13	42.36
TraesCS1B01G035700.1	Wheat	cytosol	43.35	42.22
TraesCS2B01G071200.1	Wheat	cytosol	29.83	42.06
TraesCS2B01G038800.1	Wheat	cytosol	42.27	41.96
TraesCS1B01G035500.1	Wheat	cytosol	43.56	41.68
TraesCS2B01G039100.1	Wheat	cytosol	41.95	41.6
TraesCS1B01G012500.1	Wheat	cytosol	40.77	41.53
TraesCS7B01G339100.1	Wheat	cytosol	27.04	40.84
TraesCS1B01G035200.1	Wheat	cytosol, extracellular, plastid	41.52	40.52
TraesCS4B01G318600.1	Wheat	cytosol	31.44	39.7
TraesCS2B01G038900.1	Wheat	cytosol	42.17	39.5
TraesCS7B01G496000.1	Wheat	cytosol	12.02	39.3
TraesCS6B01G000200.1	Wheat	cytosol	12.66	38.56
TraesCS1B01G034700.1	Wheat	cytosol	26.72	38.31
TraesCS5B01G237200.1	Wheat	cytosol	37.45	38.18
TraesCS2B01G608500.1	Wheat	cytosol	33.15	37.27
TraesCS5B01G093300.1	Wheat	cytosol	37.45	36.85
TraesCS3B01G096900.1	Wheat	cytosol	36.16	36.55
TraesCS7B01G416600.3	Wheat	cytosol	37.45	36.28
TraesCS6B01G016600.1	Wheat	cytosol	31.44	35.91
TraesCS2B01G608800.2	Wheat	cytosol	34.33	35.71
TraesCS5B01G032600.1	Wheat	cytosol	23.93	35.68
TraesCS6B01G000100.1	Wheat	cytosol	40.02	35.32
TraesCS2B01G608000.1	Wheat	cytosol	34.12	35.18
TraesCS2B01G084300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	35.73	34.4
TraesCS5B01G014000.1	Wheat	cytosol	39.27	33.98
TraesCS7B01G339200.1	Wheat	cytosol	35.84	33.81
TraesCS2B01G597700.2	Wheat	cytosol	29.61	32.82
TraesCS5B01G540000.2	Wheat	endoplasmic reticulum, extracellular, golgi	34.66	32.53
TraesCS6B01G016500.1	Wheat	cytosol	37.23	32.4
TraesCS6B01G016100.1	Wheat	cytosol	37.02	32.24
TraesCS2B01G070900.1	Wheat	cytosol	37.77	31.37
TraesCS2B01G085000.1	Wheat	cytosol, endoplasmic reticulum, extracellular	36.27	29.78
TraesCS4B01G345900.1	Wheat	extracellular	23.93	21.34

Protein Annotations

EnsemblPlants:TraesCS1B01G002900.2	EnsemblPlantsGene:TraesCS1B01G002900	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr1B:-:1939687..1942920

Molecular Weight (calculated)

105792.0 Da

IEP (calculated)

7.749

GRAVY (calculated)

-0.171

Length

932 amino acids

Sequence
(BLAST)

001: MEAAMIPLIK KLGGLLADEY NLETRVRKGV ESLIIELEMM HAVLRKIGDK PPEQFDEQVL IWAGKVRDLS YRMEDAVDSF VVRVEDDGHD RGSTNMKNRV
101: KKFLKRATKL FTKGKALHQI SDDIEEAQRL AKELGDLRQR YMIDAHASAN GDAIDPRLKA VYKDVTELVG IDHIRDGLIE NLCGCDERSK DQLRTMSIVG
201: FGGLGKTTLA KAVYDKIKVQ FHSRAFVSVS RNPDMTKIFK KILYELDKSK YATINEAARD NEQLIDEMRM FLQDKRYLIV IDDIWDEEAW EFIKCAFSDN
301: CLGSRVMTTT RIGSISKACC SSGEDIIYHM KRLTDDDSRK LFYKRIFPQG SKCPAELEPV SREILKKCGG VPLAIITIAS ILANNGQDQW IKPKYHWDNI
401: LGSIGRGLAE GGSANDMHRI LSFSYYDLPS HLKACLLYLS IFPEDFEIRR KRLIWMWIAE GLVQDGKKQT GLFELGESYF NELANRNLIQ PIHVDDTGKA
501: KACRVHDMLL DLLCSLSSEV NFVTILDGTQ QSKHISHNKS RRLSFQNSMS KLTTHGVDAT SMSQVRSVVL FRTDTDLIRT VSGFHVLRVL DLEGCDLRKN
601: RQHIDLRYVE NLLHLRYLGL RKTFLGELPV EIGKLKYLET LDLAENGSSV ATIPSSVVCL RRLMFLDAGK AVLPVGIGNL TSLEELTGKL VDMKELGQLV
701: KLRVLYLYWN GDDESMCNSL QLSLGKLQKM QSLTIFNVGD ARSDVSWDGW VPTPQLRYLL FRCCTTTLPR WVNSSSFPLL SSMSISVDRI RPEVDIQILG
801: TLPALCLLWL LTSKHQHTCV KTFVVGANAF RCLRECSFFG FLTGPSMFPR GAMPRLEFLM FSARASDIVG GDLDVSMGHL PFLRHVMVYL WLEEGSSLDK
901: FKEEADVVLR HALDIHPNRP TLETYKDAFY NQ

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.