Factsheet for TraesCS2B01G038900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G028400.1	Wheat	plastid	74.27	77.63
TraesCS1B01G278000.1	Wheat	cytosol	17.69	74.26
TraesCS1B01G277900.1	Wheat	cytosol	22.41	73.11
TraesCS2B01G039500.1	Wheat	cytosol	17.89	71.77
TraesCS2B01G039400.1	Wheat	cytosol	27.34	64.45
TraesCS2B01G039100.1	Wheat	cytosol	57.19	60.53
TraesCS5B01G360100.2	Wheat	cytosol	33.17	60.33
TraesCS2B01G037900.1	Wheat	cytosol	57.39	59.92
TraesCS2B01G038100.2	Wheat	cytosol	57.09	59.85
TraesCS2B01G039600.1	Wheat	cytosol	55.98	59.13
TraesCS1B01G036200.1	Wheat	cytosol	14.37	58.85
TraesCS2B01G038800.1	Wheat	cytosol	55.38	58.68
TraesCS1B01G035600.1	Wheat	cytosol	32.16	57.97
TraesCS1B01G035400.1	Wheat	cytosol	18.79	57.89
TraesCS1B01G034600.1	Wheat	cytosol	15.18	55.11
TraesCS6B01G004900.1	Wheat	cytosol	17.99	55.08
TraesCS1B01G035200.1	Wheat	cytosol, extracellular, plastid	49.15	51.2
TraesCS2B01G084900.1	Wheat	cytosol	18.49	50.83
TraesCS1B01G034500.1	Wheat	cytosol	47.64	49.74
TraesCS7B01G008700.1	Wheat	cytosol	26.53	49.72
TraesCS1B01G035700.1	Wheat	cytosol	47.74	49.63
TraesCS6B01G000200.1	Wheat	cytosol	15.18	49.35
TraesCS6B01G004600.1	Wheat	cytosol	24.02	49.08
TraesCS7B01G496000.1	Wheat	cytosol	13.97	48.77
TraesCS1B01G035500.1	Wheat	cytosol	47.44	48.46
TraesCS7B01G009100.1	Wheat	cytosol	28.24	47.39
TraesCS3B01G522400.1	Wheat	extracellular	33.07	46.14
TraesCS5B01G032500.1	Wheat	cytosol	14.27	45.51
TraesCS7B01G009000.1	Wheat	cytosol	15.28	44.71
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	21.71	44.08
TraesCS1B01G002500.1	Wheat	peroxisome	36.78	44.04
TraesCS3B01G522500.1	Wheat	cytosol	40.5	43.66
TraesCS1B01G000300.1	Wheat	cytosol	12.36	43.46
TraesCS3B01G522600.1	Wheat	cytosol, extracellular, plasma membrane	39.9	43.25
TraesCS7B01G008600.1	Wheat	cytosol	40.2	42.83
TraesCS7B01G339100.1	Wheat	cytosol	26.53	42.79
TraesCS3B01G522800.1	Wheat	cytosol	37.69	42.66
TraesCS1B01G000500.1	Wheat	cytosol	39.9	42.46
TraesCS3B01G523000.1	Wheat	extracellular, plasma membrane	39.6	42.46
TraesCS1B01G002900.2	Wheat	cytosol	39.5	42.17
TraesCS7B01G008500.1	Wheat	cytosol	37.79	42.11
TraesCS1B01G012500.1	Wheat	cytosol	38.69	42.08
TraesCS7B01G479900.1	Wheat	endoplasmic reticulum, plasma membrane	35.28	41.94
TraesCS1B01G034700.1	Wheat	cytosol	27.34	41.85
TraesCS3B01G523300.1	Wheat	cytosol, plasma membrane	40.0	41.63
TraesCS3B01G522700.1	Wheat	cytosol	39.1	41.6
TraesCS3B01G523400.1	Wheat	plasma membrane	35.48	41.58
TraesCS7B01G008800.1	Wheat	cytosol	35.88	41.56
TraesCS2B01G625400.1	Wheat	cytosol	38.29	40.92
TraesCS2B01G625500.1	Wheat	cytosol	36.58	39.31
TraesCS3B01G607700.1	Wheat	cytosol	26.63	39.14
TraesCS2B01G071200.1	Wheat	cytosol	25.73	38.73
TraesCS3B01G096900.1	Wheat	cytosol	35.88	38.72
TraesCS2B01G084300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	36.78	37.81
TraesCS4B01G318600.1	Wheat	cytosol	27.64	37.26
TraesCS6B01G000100.1	Wheat	cytosol	38.99	36.74
Os11t0657900-00	Rice	cytosol	37.59	36.31
TraesCS5B01G237200.1	Wheat	cytosol	33.07	36.0
TraesCS5B01G093300.1	Wheat	cytosol	33.97	35.69
TraesCS6B01G016600.1	Wheat	cytosol	29.25	35.66
TraesCS2B01G608500.1	Wheat	cytosol	29.45	35.34
TraesCS7B01G339200.1	Wheat	cytosol	34.77	35.02
TraesCS7B01G416600.3	Wheat	cytosol	33.77	34.93
TraesCS7B01G008900.1	Wheat	cytosol	38.49	34.82
TraesCS5B01G014000.1	Wheat	cytosol	36.78	33.98
TraesCS2B01G608800.2	Wheat	cytosol	30.55	33.93
TraesCS2B01G085000.1	Wheat	cytosol, endoplasmic reticulum, extracellular	38.19	33.48
TraesCS2B01G608000.1	Wheat	cytosol	29.85	32.85
TraesCS5B01G540000.2	Wheat	endoplasmic reticulum, extracellular, golgi	32.56	32.63
TraesCS5B01G032600.1	Wheat	cytosol	19.9	31.68
TraesCS6B01G016500.1	Wheat	cytosol	34.07	31.65
TraesCS6B01G016100.1	Wheat	cytosol	33.47	31.12
TraesCS2B01G070900.1	Wheat	cytosol	33.77	29.95
TraesCS2B01G597700.2	Wheat	cytosol	25.23	29.85
TraesCS4B01G345900.1	Wheat	extracellular	20.7	19.71

Protein Annotations

EnsemblPlants:TraesCS2B01G038900.1	EnsemblPlantsGene:TraesCS2B01G038900	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2B:-:17933865..17939356

Molecular Weight (calculated)

113224.0 Da

IEP (calculated)

6.907

GRAVY (calculated)

-0.145

Length

995 amino acids

Sequence
(BLAST)

001: MDLATGAIGD LLPKLVELLK GEYKLKENVR EGVLSLEREM RSMHAALRKV AEVPWDRLDE QVKLWAGEVR ELSFDMEDVV DKFLVRVDDG SKPAPNSKKL
101: KQLTKMMAGL FTKWKAHHEI IGAIEEINKQ LQEVANMHGR YPVDNIVSSP AAVAPIDPRL RALYTEVTEL VGIAGKRDQD LMKLLSEGDN VSKKKLKIIS
201: VVGSGGLGKT TLVKMVYDKI KEDFDCSAFV PVGRNGDAKK ILLNILCDLD TYVGLITMLD VRQLIDKLKE TLENTRYLIV IDDIRDEKPW KIIKRAFSNS
301: NNCGSRLIMT THIVSVAKLC CSCADDSIYQ MEPLSDDDSK RLFYKRIFSH ESGCPLEFEE VSIDILKKCG GVPLAIIIIA GILVINHHPK PKDEWHVLLD
401: SIGHGHTKDP SVEEMLRILT LSYYNLPSHL KTCLLYLSMF PEYHYITKDQ LIWMWIAESF IQCEDPQTSL FEIGENYFNE LVNRSLIQPE YFDGFVIACR
501: VHNSVLDLIC TLSTEENFTT ILNDTRDSIS SKRKVRRLSL QNSIKEEHQN THLKSARSIA TFDDVDIGLM PPFSRFLFLR VLDLTECDVS DHNHLNLWEL
601: WSLLQLRYLG LYKSGISEVP EEVGKLQFLQ VLDLRGNYDI TELPSAITKL RRLMCLQIDF SCSRIPDGIG NMISMENLSS ICGDCLGTVK DLGNVERLRH
701: LNICFNVMSL KLEQAFVESL GKLRNIQSVH IWSLGYHNHY VFMDLLGSDW VPPQSLREFA AKFKFVFSKL PTWLRRNPSH LSQLSRLPAL RDLSLETMRQ
801: DPLLVGADGF RCLTRLKLIC NWAGRIVFQP EALPKTEHVD ILIYFRAANG RDWFELGLEN LQSLRRVIVQ IRLSPGVISG DAGAEQGKAT LENALRAHPN
901: HPKVGSRDEE AIRRPIRGEE AAVIRCLNMP NKWRTSGTLC SSCTQKLLGS KSFYCYLTDI ECNQGQIILC HCYPPCPQLE LSIRWMPCQQ LENLS

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.