Factsheet for TraesCS2B01G037900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G277900.1	Wheat	cytosol	25.5	79.67
TraesCS1B01G278000.1	Wheat	cytosol	19.73	79.32
TraesCS2B01G039500.1	Wheat	cytosol	19.62	75.4
TraesCS2B01G039400.1	Wheat	cytosol	32.21	72.75
TraesCS2B01G039600.1	Wheat	cytosol	66.21	66.99
TraesCS2B01G039100.1	Wheat	cytosol	63.06	63.94
TraesCS2B01G038800.1	Wheat	cytosol	62.22	63.15
TraesCS5B01G360100.2	Wheat	cytosol	35.26	61.43
TraesCS2B01G038100.2	Wheat	cytosol	60.76	61.01
TraesCS1B01G035400.1	Wheat	cytosol	20.67	60.99
TraesCS1B01G036200.1	Wheat	cytosol	15.22	59.67
TraesCS1B01G035600.1	Wheat	cytosol	34.21	59.06
TraesCS2B01G038900.1	Wheat	cytosol	59.92	57.39
TraesCS6B01G004900.1	Wheat	cytosol	19.41	56.92
TraesCS1B01G034600.1	Wheat	cytosol	16.05	55.84
TraesCS1B01G035200.1	Wheat	cytosol, extracellular, plastid	53.73	53.61
TraesCS2B01G084900.1	Wheat	cytosol	20.15	53.04
TraesCS6B01G000200.1	Wheat	cytosol	17.0	52.94
TraesCS1B01G034500.1	Wheat	cytosol	52.57	52.57
TraesCS1B01G035700.1	Wheat	cytosol	52.57	52.35
TraesCS6B01G004600.1	Wheat	cytosol	26.65	52.16
TraesCS7B01G008700.1	Wheat	cytosol	28.54	51.22
TraesCS1B01G035500.1	Wheat	cytosol	51.94	50.82
TraesCS5B01G032500.1	Wheat	cytosol	16.58	50.64
TraesCS7B01G496000.1	Wheat	cytosol	15.11	50.53
TraesCS7B01G009100.1	Wheat	cytosol	30.54	49.07
TraesCS3B01G522400.1	Wheat	extracellular	35.57	47.55
TraesCS7B01G009000.1	Wheat	cytosol	16.89	47.35
TraesCS3B01G522500.1	Wheat	cytosol	45.75	47.24
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	24.24	47.14
TraesCS1B01G002500.1	Wheat	peroxisome	40.29	46.21
TraesCS3B01G522800.1	Wheat	cytosol	42.39	45.96
TraesCS3B01G522600.1	Wheat	cytosol, extracellular, plasma membrane	43.76	45.42
TraesCS7B01G339100.1	Wheat	cytosol	29.17	45.06
TraesCS1B01G002900.2	Wheat	cytosol	43.97	44.96
TraesCS3B01G522700.1	Wheat	cytosol	43.65	44.49
TraesCS1B01G034700.1	Wheat	cytosol	30.22	44.31
TraesCS1B01G000500.1	Wheat	cytosol	43.34	44.17
TraesCS7B01G008600.1	Wheat	cytosol	43.02	43.9
TraesCS7B01G479900.1	Wheat	endoplasmic reticulum, plasma membrane	38.51	43.85
TraesCS3B01G523300.1	Wheat	cytosol, plasma membrane	43.97	43.83
TraesCS3B01G523000.1	Wheat	extracellular, plasma membrane	42.6	43.75
TraesCS1B01G012500.1	Wheat	cytosol	41.97	43.72
TraesCS3B01G607700.1	Wheat	cytosol	30.64	43.13
TraesCS3B01G523400.1	Wheat	plasma membrane	38.41	43.11
TraesCS1B01G000300.1	Wheat	cytosol	12.8	43.11
TraesCS7B01G008500.1	Wheat	cytosol	40.19	42.89
TraesCS2B01G625400.1	Wheat	cytosol	41.45	42.43
TraesCS7B01G008800.1	Wheat	cytosol	38.2	42.37
TraesCS2B01G625500.1	Wheat	cytosol	41.03	42.22
TraesCS3B01G096900.1	Wheat	cytosol	40.08	41.43
TraesCS2B01G071200.1	Wheat	cytosol	28.44	41.0
TraesCS5B01G237200.1	Wheat	cytosol	38.09	39.72
TraesCS4B01G318600.1	Wheat	cytosol	30.33	39.16
Os11t0657900-00	Rice	cytosol	41.66	38.54
TraesCS2B01G084300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	39.03	38.43
TraesCS2B01G608500.1	Wheat	cytosol	33.37	38.36
TraesCS6B01G000100.1	Wheat	cytosol	42.18	38.07
TraesCS7B01G339200.1	Wheat	cytosol	39.03	37.65
TraesCS2B01G608800.2	Wheat	cytosol	34.94	37.17
TraesCS6B01G016600.1	Wheat	cytosol	31.79	37.13
TraesCS5B01G093300.1	Wheat	cytosol	36.41	36.64
TraesCS7B01G416600.3	Wheat	cytosol	36.41	36.07
TraesCS5B01G014000.1	Wheat	cytosol	40.4	35.75
TraesCS2B01G608000.1	Wheat	cytosol	33.89	35.73
TraesCS7B01G008900.1	Wheat	cytosol	40.61	35.18
TraesCS5B01G540000.2	Wheat	endoplasmic reticulum, extracellular, golgi	34.94	33.53
TraesCS2B01G085000.1	Wheat	cytosol, endoplasmic reticulum, extracellular	39.66	33.3
TraesCS5B01G032600.1	Wheat	cytosol	21.51	32.8
TraesCS6B01G016500.1	Wheat	cytosol	36.83	32.77
TraesCS2B01G597700.2	Wheat	cytosol	28.86	32.7
TraesCS6B01G016100.1	Wheat	cytosol	36.31	32.34
TraesCS2B01G070900.1	Wheat	cytosol	37.04	31.46
TraesCS4B01G345900.1	Wheat	extracellular	22.98	20.96

Protein Annotations

EnsemblPlants:TraesCS2B01G037900.1	EnsemblPlantsGene:TraesCS2B01G037900	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr2B:+:17564300..17571243

Molecular Weight (calculated)

107577.0 Da

IEP (calculated)

6.104

GRAVY (calculated)

-0.172

Length

953 amino acids

Sequence
(BLAST)

001: MDLATGAMGS LLPKLVELLK DEYKLKESVK EGVKSLEKEM KSMQAALRKV AEVPHDQLEE QVKLWAGEVR ELSFDMEDTV DKFLVRVDEE SESSTKSNKL
101: KQLMKKMAGL FTKGKARHEI ADAIKDINKQ VQEVADRRAR YNVDNIVARP EVVTLDPRLR ALYMEVTDLV GISGKRDQEL MNLLSGGDDM SKTTLKIVSV
201: VGFGGLGKTT LVKTVYDKIK EDFHCRAFVS VGRNGTAKKV LVDILLALKI YESHFTIFNE TQLIDEVRER LKNKRYLIVI DDIWDEKLWT VINWAFSKGN
301: NFGSRLITTT RIVSVSKLCC SSANDEVYQM EPLSDDDSKM LFHKRIFSQE SGCPREFEEV SRDILKKCGG VPLAIITIAS ILASDKKINS LDEWKVLLES
401: IGRGLTKDHS VEEMLRILSF SYYDLPSHLR TCLLYLSMFP EDHKIMKAQL IWMWIAERFI QCEDAQSSLY EIGQNYFNEL VNRSLIQPVY SSDDGLANAC
501: RVHDSVLDLI CSLSVEEKFV TIVNGSCDTM SCQGIIRRLS IQNVRKEEDQ TRPLRPESIA QVRSIATFAS PAIDLLPSLS NFAVLRVLHL DGYIGSLGYH
601: LNPGELGSLL HLRYLHLCGT GFDKLLEEIG KLQFLQVLDL PEHTRLPSTV IKLTRLMYLR IGRGSWNYDP PDGIGNLTSL EVLGRISVSS VSIVKELGNM
701: VKLRELKISF DDLWLDLEEA FVESLGKMPK IQRVEIVAGD EDSSTPSMNL LGERWVPPGC LQEFAMFDDA LFDTLPTWIR RNPSHLSQLF KLDISLYEVR
801: QEDLDNLGRL PALGVLELSC SYARKRMLHI GGDGFRCLTS FYLYFGVDGN IVFQPGAMPK AEHVDVTAHW AVVKEEASGN NGADWFDPGI GMGNLPSLRK
901: VKVRVDSHKM TVGEAKQAKA ALENALRAHP NRPLFCVEFR WSIKEGAHDD DLC

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.