Factsheet for TraesCS5B01G237200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G068380.3	Barley	cytosol	91.14	90.64
TraesCS7A01G551900.1	Wheat	cytosol	61.6	66.08
TraesCS7D01G538200.2	Wheat	cytosol	67.4	63.31
TraesCS2B01G608500.1	Wheat	cytosol	51.86	57.18
Os11t0550500-01	Rice	cytosol	56.35	56.35
TraesCS4B01G318600.1	Wheat	cytosol	44.31	54.88
Zm00001d007457_P003	Maize	cytosol	55.69	53.81
TraesCS2B01G608800.2	Wheat	cytosol	52.41	53.46
Zm00001d036280_P002	Maize	cytosol	55.25	53.1
OQU83506	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	51.31	53.05
TraesCS2B01G608000.1	Wheat	cytosol	52.41	52.99
Zm00001d007456_P005	Maize	cytosol	39.82	50.21
TraesCS5B01G032500.1	Wheat	cytosol	16.52	48.4
TraesCS2B01G084900.1	Wheat	cytosol	18.38	46.41
TraesCS1B01G035400.1	Wheat	cytosol	16.3	46.13
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	24.62	45.92
TraesCS6B01G004900.1	Wheat	cytosol	16.19	45.54
TraesCS6B01G004600.1	Wheat	cytosol	23.96	44.97
TraesCS1B01G035600.1	Wheat	cytosol	27.13	44.93
TraesCS1B01G277900.1	Wheat	cytosol	14.99	44.92
TraesCS2B01G071200.1	Wheat	cytosol	32.17	44.48
TraesCS5B01G360100.2	Wheat	cytosol	26.48	44.24
TraesCS1B01G036200.1	Wheat	cytosol	11.6	43.62
TraesCS1B01G278000.1	Wheat	cytosol	11.27	43.46
TraesCS1B01G034600.1	Wheat	cytosol	12.91	43.07
TraesCS7B01G008700.1	Wheat	cytosol	24.51	42.18
TraesCS7B01G496000.1	Wheat	cytosol	13.13	42.11
TraesCS2B01G039400.1	Wheat	cytosol	19.26	41.71
TraesCS2B01G039500.1	Wheat	cytosol	11.16	41.13
TraesCS1B01G000300.1	Wheat	cytosol	12.25	39.58
TraesCS6B01G000200.1	Wheat	cytosol	13.24	39.54
TraesCS1B01G012500.1	Wheat	cytosol	39.5	39.45
TraesCS7B01G339100.1	Wheat	cytosol	26.59	39.38
TraesCS7B01G009100.1	Wheat	cytosol	25.38	39.12
TraesCS1B01G002500.1	Wheat	peroxisome	35.23	38.75
TraesCS5B01G093300.1	Wheat	cytosol	39.93	38.54
TraesCS1B01G034500.1	Wheat	cytosol	40.04	38.41
TraesCS3B01G522400.1	Wheat	extracellular	29.87	38.29
TraesCS2B01G037900.1	Wheat	cytosol	39.72	38.09
TraesCS7B01G009000.1	Wheat	cytosol	14.11	37.94
TraesCS7B01G479900.1	Wheat	endoplasmic reticulum, plasma membrane	34.68	37.87
TraesCS3B01G523000.1	Wheat	extracellular, plasma membrane	38.29	37.72
TraesCS1B01G035700.1	Wheat	cytosol	39.39	37.62
TraesCS1B01G000500.1	Wheat	cytosol	38.4	37.54
TraesCS1B01G002900.2	Wheat	cytosol	38.18	37.45
TraesCS1B01G035200.1	Wheat	cytosol, extracellular, plastid	38.95	37.28
TraesCS1B01G035500.1	Wheat	cytosol	39.61	37.17
TraesCS3B01G522800.1	Wheat	cytosol	35.56	36.97
TraesCS5B01G014000.1	Wheat	cytosol	43.54	36.95
TraesCS2B01G039600.1	Wheat	cytosol	37.97	36.84
TraesCS3B01G522600.1	Wheat	cytosol, extracellular, plasma membrane	36.87	36.71
TraesCS2B01G038800.1	Wheat	cytosol	37.64	36.63
TraesCS3B01G522500.1	Wheat	cytosol	36.87	36.51
TraesCS7B01G008500.1	Wheat	cytosol	35.67	36.51
TraesCS3B01G096900.1	Wheat	cytosol	36.76	36.44
TraesCS3B01G523300.1	Wheat	cytosol, plasma membrane	38.07	36.4
TraesCS2B01G038100.2	Wheat	cytosol	37.75	36.35
TraesCS7B01G008800.1	Wheat	cytosol	33.92	36.09
TraesCS7B01G008600.1	Wheat	cytosol	36.76	35.97
TraesCS3B01G607700.1	Wheat	cytosol	26.48	35.75
TraesCS2B01G039100.1	Wheat	cytosol	36.76	35.74
TraesCS3B01G522700.1	Wheat	cytosol	36.54	35.72
TraesCS3B01G523400.1	Wheat	plasma membrane	33.04	35.57
TraesCS7B01G416600.3	Wheat	cytosol	37.42	35.55
TraesCS6B01G016600.1	Wheat	cytosol	31.62	35.42
TraesCS2B01G084300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	35.45	33.47
TraesCS5B01G540000.2	Wheat	endoplasmic reticulum, extracellular, golgi	36.21	33.33
TraesCS2B01G070900.1	Wheat	cytosol	40.92	33.33
TraesCS2B01G597700.2	Wheat	cytosol	30.53	33.17
TraesCS6B01G000100.1	Wheat	cytosol	38.29	33.14
TraesCS2B01G625400.1	Wheat	cytosol	33.7	33.08
TraesCS2B01G038900.1	Wheat	cytosol	36.0	33.07
TraesCS7B01G339200.1	Wheat	cytosol	35.34	32.69
TraesCS1B01G034700.1	Wheat	cytosol	23.09	32.46
TraesCS2B01G625500.1	Wheat	cytosol	32.06	31.64
TraesCS6B01G016500.1	Wheat	cytosol	36.65	31.28
TraesCS6B01G016100.1	Wheat	cytosol	36.21	30.93
TraesCS7B01G008900.1	Wheat	cytosol	36.98	30.73
TraesCS5B01G032600.1	Wheat	cytosol	20.79	30.4
TraesCS2B01G085000.1	Wheat	cytosol, endoplasmic reticulum, extracellular	35.56	28.63
TraesCS4B01G345900.1	Wheat	extracellular	24.84	21.72

Protein Annotations

EnsemblPlants:TraesCS5B01G237200.1	EnsemblPlantsGene:TraesCS5B01G237200	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF34	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr5B:-:418015281..418018873

Molecular Weight (calculated)

103771.0 Da

IEP (calculated)

6.818

GRAVY (calculated)

-0.143

Length

914 amino acids

Sequence
(BLAST)

001: MEVVTGAMST LLPKLGSMLK DEYNLHRKVR GEILFLTAEL ERMEAALIEV SEAPIDHPPS KLVKLWAKDV KDLSYEIEDS VDKFMVHLDG RAEEKAQSFM
101: GFIHRSIDLL TRAKTRHKIG TEVKHIKRRI QEVSARRDRY KVDKAVEKPV VTSVDSLRLS ALYKKETELV GTEEKIQELV ETMTEEADEA SKQQLKIVSI
201: AGFGGLGKTT LANAVYQKLK SQFDCGAFVS VSLNPNIEKI FKNILHQLDK HNYSNINEAV WGEAQLISEL RDFLLNKRYF IVIDDIWNIS VWKTIKHAFI
301: ENRCGSRIII TTRILDVAKQ VGSVYDLKPL SPIDSRKLFH QRIFGIEDKY PPTQLAEVSE NILKRCSGVP LAIVTTASML ASKRGNDWPK VYQSMGSEPQ
401: DSSDMQDMRR VLSVSYYDLP AHLKTCLLFI SVYPEDYTIV AEDLIWQWIG QGFVQEEHGK SLYEVGEEYF AQLINKSLIQ PVDIGSGNKA SACRVHDMVL
501: DLITSLSSEE NFLITVGGLQ PVSASSKIHR LSVQNRNEDD LKKLATMSLS HVRSVFVFGQ DISLLPALSS FPVIRALDLS YCLNVDNHHV KIMCNLLHLR
601: YLRLCNTSIT EIPEEIGNLQ FLQVLDISQT GIEVLPPQFV RLTQLVYLHI DRRTKLPDQF GDLKSLQDFP VIPTVTSPSM LHDVGKLTKL RNLLISFDEW
701: NESYEEPFCR CLSNLVNLKT IKIIGAHLGL DSGSDYLLPR PRYIQTIHLI NNINCALPRW MSSLSCLSFL TIHGLRTLRV EDLQVLGSIP SLSYLDIWVV
801: EPTQERQDRL LIDSGHPFLC LTTLKVASRV MELRFAQGAT QKLQTLKLRF SARQTLYQFG DLDFGLENVS SLEHVYVGRW SKPEPGEVEA VEAAVREALG
901: MNPNQPTLEF SKWR

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.