Factsheet for TraesCS5B01G093300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G035400.1	Wheat	cytosol	15.42	45.2
TraesCS5B01G032500.1	Wheat	cytosol	14.68	44.55
TraesCS1B01G035600.1	Wheat	cytosol	25.87	44.38
TraesCS1B01G036200.1	Wheat	cytosol	11.3	44.03
TraesCS2B01G071200.1	Wheat	cytosol	30.73	44.02
TraesCS6B01G004600.1	Wheat	cytosol	22.49	43.74
TraesCS5B01G360100.2	Wheat	cytosol	25.24	43.69
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	22.6	43.67
TraesCS6B01G004900.1	Wheat	cytosol	14.78	43.08
TraesCS2B01G084900.1	Wheat	cytosol	16.37	42.82
TraesCS1B01G034600.1	Wheat	cytosol	12.25	42.34
TraesCS1B01G277900.1	Wheat	cytosol	13.62	42.3
TraesCS7B01G009100.1	Wheat	cytosol	25.98	41.48
TraesCS5B01G540000.2	Wheat	endoplasmic reticulum, extracellular, golgi	43.29	41.29
TraesCS7B01G008700.1	Wheat	cytosol	23.13	41.24
TraesCS2B01G039400.1	Wheat	cytosol	18.27	41.0
TraesCS2B01G039500.1	Wheat	cytosol	10.67	40.73
TraesCS1B01G278000.1	Wheat	cytosol	10.14	40.51
TraesCS3B01G522400.1	Wheat	extracellular	30.31	40.25
TraesCS7B01G339100.1	Wheat	cytosol	26.08	40.03
TraesCS5B01G237200.1	Wheat	cytosol	38.54	39.93
TraesCS3B01G522500.1	Wheat	cytosol	38.23	39.22
TraesCS6B01G000200.1	Wheat	cytosol	12.67	39.22
TraesCS4B01G318600.1	Wheat	cytosol	30.31	38.89
TraesCS1B01G002500.1	Wheat	peroxisome	34.0	38.75
TraesCS7B01G496000.1	Wheat	cytosol	11.62	38.6
TraesCS3B01G522600.1	Wheat	cytosol, extracellular, plasma membrane	37.38	38.56
TraesCS2B01G608500.1	Wheat	cytosol	33.37	38.12
TraesCS3B01G522800.1	Wheat	cytosol	35.37	38.11
TraesCS7B01G479900.1	Wheat	endoplasmic reticulum, plasma membrane	33.58	37.99
TraesCS1B01G012500.1	Wheat	cytosol	36.64	37.92
TraesCS1B01G000500.1	Wheat	cytosol	37.28	37.75
TraesCS3B01G522700.1	Wheat	cytosol	37.17	37.65
TraesCS1B01G034500.1	Wheat	cytosol	37.8	37.57
TraesCS1B01G002900.2	Wheat	cytosol	36.85	37.45
TraesCS1B01G035500.1	Wheat	cytosol	38.23	37.17
TraesCS2B01G039100.1	Wheat	cytosol	36.64	36.91
TraesCS5B01G014000.1	Wheat	cytosol	41.92	36.86
TraesCS7B01G008500.1	Wheat	cytosol	34.74	36.84
TraesCS2B01G039600.1	Wheat	cytosol	36.54	36.73
TraesCS1B01G035700.1	Wheat	cytosol	37.06	36.68
TraesCS3B01G523400.1	Wheat	plasma membrane	32.84	36.63
TraesCS3B01G523300.1	Wheat	cytosol, plasma membrane	36.85	36.51
TraesCS7B01G009000.1	Wheat	cytosol	13.09	36.47
TraesCS2B01G037900.1	Wheat	cytosol	36.64	36.41
TraesCS1B01G000300.1	Wheat	cytosol	10.88	36.4
TraesCS3B01G523000.1	Wheat	extracellular, plasma membrane	35.59	36.31
TraesCS7B01G008600.1	Wheat	cytosol	35.8	36.3
TraesCS2B01G038800.1	Wheat	cytosol	35.9	36.21
TraesCS2B01G038100.2	Wheat	cytosol	36.22	36.14
TraesCS1B01G035200.1	Wheat	cytosol, extracellular, plastid	36.33	36.02
TraesCS3B01G096900.1	Wheat	cytosol	34.85	35.79
TraesCS2B01G625400.1	Wheat	cytosol	35.16	35.77
TraesCS2B01G608800.2	Wheat	cytosol	33.37	35.27
TraesCS7B01G008800.1	Wheat	cytosol	31.89	35.16
TraesCS2B01G608000.1	Wheat	cytosol	33.37	34.96
TraesCS3B01G607700.1	Wheat	cytosol	24.71	34.56
TraesCS2B01G625500.1	Wheat	cytosol	33.58	34.34
TraesCS7B01G416600.3	Wheat	cytosol	34.64	34.1
TraesCS2B01G038900.1	Wheat	cytosol	35.69	33.97
TraesCS2B01G070900.1	Wheat	cytosol	40.23	33.96
TraesCS1B01G034700.1	Wheat	cytosol	23.23	33.85
TraesCS2B01G597700.2	Wheat	cytosol	29.78	33.53
TraesCS6B01G000100.1	Wheat	cytosol	37.17	33.33
TraesCS7B01G339200.1	Wheat	cytosol	34.74	33.3
TraesCS2B01G084300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	34.0	33.26
TraesCS6B01G016600.1	Wheat	cytosol	28.09	32.6
TraesCS7B01G008900.1	Wheat	cytosol	35.9	30.91
TraesCS5B01G032600.1	Wheat	cytosol	19.96	30.24
TraesCS6B01G016500.1	Wheat	cytosol	34.11	30.16
TraesCS6B01G016100.1	Wheat	cytosol	33.47	29.63
TraesCS2B01G085000.1	Wheat	cytosol, endoplasmic reticulum, extracellular	34.74	28.99
TraesCS4B01G345900.1	Wheat	extracellular	25.13	22.78

Protein Annotations

EnsemblPlants:TraesCS5B01G093300.1	EnsemblPlantsGene:TraesCS5B01G093300	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF37	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5B:-:122435419..122438715

Molecular Weight (calculated)

107990.0 Da

IEP (calculated)

6.894

GRAVY (calculated)

-0.131

Length

947 amino acids

Sequence
(BLAST)

001: MEAIVCATHG AMGSVLRKLG ALLSDEYKLL RSVKGDVMFL KAELESMHAF LKMMSEVEDP DELSKCWIKE VRELSYNIEY GIDSFMLSPC GESSRKPRGF
101: KGRLSRCMDI MTNSKTRHCI AKKIKVLKQD AIEVSSRRAR YKVDDVVSKP SRISIDPRLP AFFTEMTKLV GIDGPKDKLI KLLTEGEVAI AQQLKVVSIV
201: GIGGLGKTTL ANQVYQKLEG QFECQAFVSV SQKPDLKRIL RNILSQICCQ ERVSNEEWDE QQLINTIRQF LKHKRYFIVI DDIWGTPAWR AIKCAFPENS
301: SSSRILTTTR ILTVAKYCSH DRVYEIKPLS ATHSKSLFFK RAFGCEGGCP LQLREVSDEI LKKCGGLPLA IITVASLLAN KASTREEWLR IRNSLGSALE
401: KDLDMEEMKK ILFLGYNDLP YHLKTCLLYL SIFPEDYVIK RDRLVRRWIA EGFIIVEGGQ DLEEVGEGYF SDLINRSLIE PVEIQYDGRA DACRVHDMIL
501: DLIISKSIEE NFVTLSGDSK HNSLPYDKVH RLSLNYHAQE HTMVPSNMVV SHVRSLTIFG CAEAEHMLSL SNFQSVRVLD IENREVLEHK YLEHISRLSQ
601: LKYLRLNVRR ITALPEQLGE LRNLQTLDLR WTWVKKLPAS IVQLQQLACL LVKSAELPEG IGNMRALREL SEIEINQNTC LTSLQELGSL TKLRILELNL
701: NWHISSTNSG MKACVDNLVM SLCKLGMLNL RSIHLQSYHS CSLDFLIDSW FPPPHLLQRF EMSINYYFPT IPKWVASLEH LSYLGIYVNP VDEETFRVLG
801: NLPSLLFLWI TSRTARPIER LIISNNGFRY LKEFYFTCWD SGAGLMFEAG AMPELENLRV PFNAHDVFPS SGGLDFGIQN LYSLKHLHIE IVCYGAKVRE
901: VEALEHAVKN AAGCLSDELT LEVNRWDEEE IVKDGEHKLA EEELSCQ

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.