Factsheet for TraesCS6B01G016600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G086000.1	Wheat	cytosol	30.88	60.58
TraesCS5B01G032500.1	Wheat	cytosol	23.04	60.26
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	34.44	57.35
Os11t0588600-01	Rice	cytosol, plasma membrane	16.91	50.55
TraesCS6B01G004600.1	Wheat	cytosol	27.45	46.0
TraesCS6B01G004900.1	Wheat	cytosol	18.26	45.85
TraesCS1B01G277900.1	Wheat	cytosol	16.79	44.92
TraesCS2B01G084900.1	Wheat	cytosol	19.0	42.82
TraesCS7B01G416600.3	Wheat	cytosol	50.37	42.72
TraesCS1B01G278000.1	Wheat	cytosol	12.38	42.62
TraesCS1B01G035400.1	Wheat	cytosol	16.79	42.41
TraesCS5B01G360100.2	Wheat	cytosol	28.06	41.86
TraesCS7B01G009000.1	Wheat	cytosol	16.91	40.59
Zm00001d004772_P006	Maize	cytosol	50.86	40.33
TraesCS2B01G039400.1	Wheat	cytosol	20.83	40.28
Zm00001d004771_P001	Maize	cytosol	50.74	40.23
TraesCS1B01G000300.1	Wheat	cytosol	13.85	39.93
TraesCS2B01G039500.1	Wheat	cytosol	12.13	39.92
TraesCS6B01G000200.1	Wheat	cytosol	14.95	39.87
TraesCS1B01G036200.1	Wheat	cytosol	11.76	39.51
TraesCS1B01G034600.1	Wheat	cytosol	13.11	39.05
TraesCS1B01G035600.1	Wheat	cytosol	26.23	38.77
Os11t0590700-01	Rice	cytosol	40.56	38.76
TraesCS7B01G008700.1	Wheat	cytosol	25.0	38.42
TraesCS6B01G016500.1	Wheat	cytosol	50.12	38.19
Os11t0588400-01	Rice	cytosol	42.16	37.76
TraesCS6B01G016100.1	Wheat	cytosol	49.26	37.57
TraesCS7B01G496000.1	Wheat	cytosol	13.11	37.54
TraesCS7B01G009100.1	Wheat	cytosol	27.21	37.44
HORVU6Hr1G002150.4	Barley	cytosol, golgi, nucleus	51.84	36.88
TraesCS3B01G096900.1	Wheat	cytosol	39.09	34.6
TraesCS1B01G012500.1	Wheat	cytosol	38.48	34.32
TraesCS3B01G522400.1	Wheat	extracellular	29.78	34.08
TraesCS7B01G339100.1	Wheat	cytosol	25.49	33.71
TraesCS7B01G479900.1	Wheat	endoplasmic reticulum, plasma membrane	34.44	33.57
TraesCS2B01G608500.1	Wheat	cytosol	33.82	33.29
TraesCS1B01G002500.1	Wheat	peroxisome	33.7	33.09
TraesCS3B01G522500.1	Wheat	cytosol	36.89	32.61
TraesCS7B01G008500.1	Wheat	cytosol	35.66	32.59
TraesCS3B01G523300.1	Wheat	cytosol, plasma membrane	37.87	32.32
TraesCS3B01G523000.1	Wheat	extracellular, plasma membrane	36.64	32.22
TraesCS1B01G000500.1	Wheat	cytosol	36.89	32.19
TraesCS3B01G522600.1	Wheat	cytosol, extracellular, plasma membrane	36.15	32.14
TraesCS7B01G008600.1	Wheat	cytosol	36.76	32.12
TraesCS2B01G038800.1	Wheat	cytosol	36.76	31.95
TraesCS1B01G035200.1	Wheat	cytosol, extracellular, plastid	37.25	31.83
TraesCS2B01G037900.1	Wheat	cytosol	37.13	31.79
TraesCS3B01G522700.1	Wheat	cytosol	36.4	31.76
TraesCS5B01G032600.1	Wheat	cytosol	24.26	31.68
TraesCS5B01G237200.1	Wheat	cytosol	35.42	31.62
TraesCS1B01G002900.2	Wheat	cytosol	35.91	31.44
TraesCS3B01G522800.1	Wheat	cytosol	33.82	31.4
TraesCS2B01G039100.1	Wheat	cytosol	36.15	31.38
TraesCS2B01G039600.1	Wheat	cytosol	36.15	31.32
TraesCS2B01G084300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	36.89	31.09
TraesCS1B01G034500.1	Wheat	cytosol	36.27	31.06
TraesCS2B01G625400.1	Wheat	cytosol	35.17	30.83
TraesCS2B01G608800.2	Wheat	cytosol	33.7	30.69
TraesCS7B01G008800.1	Wheat	cytosol	32.23	30.62
TraesCS1B01G035700.1	Wheat	cytosol	35.66	30.41
TraesCS2B01G625500.1	Wheat	cytosol	34.44	30.35
TraesCS3B01G523400.1	Wheat	plasma membrane	31.5	30.27
TraesCS2B01G038100.2	Wheat	cytosol	35.17	30.24
TraesCS6B01G000100.1	Wheat	cytosol	39.09	30.21
TraesCS1B01G035500.1	Wheat	cytosol	36.03	30.18
TraesCS2B01G071200.1	Wheat	cytosol	24.39	30.11
Os07t0294100-00	Rice	cytosol	25.74	29.7
TraesCS2B01G608000.1	Wheat	cytosol	32.48	29.31
TraesCS2B01G038900.1	Wheat	cytosol	35.66	29.25
TraesCS7B01G339200.1	Wheat	cytosol	35.05	28.95
TraesCS4B01G318600.1	Wheat	cytosol	25.61	28.32
TraesCS5B01G093300.1	Wheat	cytosol	32.6	28.09
TraesCS3B01G607700.1	Wheat	cytosol	22.92	27.62
TraesCS2B01G085000.1	Wheat	cytosol, endoplasmic reticulum, extracellular	37.62	27.05
TraesCS5B01G014000.1	Wheat	cytosol	35.54	26.93
TraesCS7B01G008900.1	Wheat	cytosol	35.91	26.64
Os11t0590900-00	Rice	cytosol	13.48	26.13
TraesCS5B01G540000.2	Wheat	endoplasmic reticulum, extracellular, golgi	31.13	25.58
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	35.29	24.83
TraesCS1B01G034700.1	Wheat	cytosol	18.5	23.23
TraesCS2B01G597700.2	Wheat	cytosol	23.53	22.83
TraesCS2B01G070900.1	Wheat	cytosol	30.76	22.37
TraesCS4B01G345900.1	Wheat	extracellular	20.83	16.27

Protein Annotations

EnsemblPlants:TraesCS6B01G016600.1	EnsemblPlantsGene:TraesCS6B01G016600	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF23	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6B:+:10136345..10142317

Molecular Weight (calculated)

91476.9 Da

IEP (calculated)

8.629

GRAVY (calculated)

-0.222

Length

816 amino acids

Sequence
(BLAST)

001: MESAMGALAT LLPKLGKLLL EEYNLKKTVK KGIGDLKAEL ETMQTALEKV SDVPLDQLDS QVKLWANEVR DLSYVIEDSL DSFIGRVEGL ELAKKPNPLK
101: DFVKKAYDKI TRFKARNKFV NGMEDIETQI RKVNERFARY KISDVVANPV TSTVDPRHFA MYSKVSALVG IDKAIEELTK RLCKADDLHK KNLKTVSGVG
201: IGGLGKTTVA KALYDKLNKK FDCGCFVPDC QNPDMKKLLK DILYDLDKKK YINIIGSKMD EKQLTDEMLE FLKEKRYLIV IDDIWDTQTW EIIKCALVDG
301: DTGSRLIATT RNSELAEKIG GVYNMKSLSE DNSRKLFYAR ICGAEYVQSA KVTDKILGKC GGVPLSIITI ASLLVGKRRE DWLKVYESIG FGHGNSEVVK
401: NMRKILCFSF YDLPSRLKTC LLHLSMFPEE HLIWKHELIW IWIAEDSCRV HDMILDLIRN FSSELRFVGI HGIELEQSPC LPSTGSSFRR LAAHRRSCRL
501: KHLGKLVQLR YLGLINTPVA EVPRKIGHDL KFLQTLDICR SGIKELPPSI GELSKLMCLY TSRGTRMMGV IGKLTSLEEL VLALVDNCSN FVRDLGKLKE
601: VRELVIHFDD MDKQTHKALL ESLCNLVEVV EASDFQMLGK LQFPRFLSLM GNEGNCLLVY TVPSGEFEKL RYLETSIIEI ICRGEGVLPM LEKLKCHASV
701: GIRKDDVGRL VQENMPMLQE PSSQNESTSS AVPLDMSKEK TEEKKRPSIG VTGELVKPGV SCRSEPLGLG LGGGLPQPKR RSRTGKPSGI SGDPTSKSQE
801: VVGASSIRTM DSHSLS

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.