Subcellular Localization
min:
: max
Winner_takes_all: golgi, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G086000.1 | Wheat | cytosol | 24.67 | 68.03 |
| Zm00001d004772_P006 | Maize | cytosol | 49.87 | 55.59 |
| Zm00001d004771_P001 | Maize | cytosol | 49.61 | 55.3 |
| Os11t0588600-01 | Rice | cytosol, plasma membrane | 12.9 | 54.21 |
| TraesCS6B01G016600.1 | Wheat | cytosol | 36.88 | 51.84 |
| HORVU1Hr1G012180.1 | Barley | cytosol | 11.94 | 47.57 |
| HORVU2Hr1G004150.3 | Barley | cytosol | 22.58 | 46.17 |
| Os11t0590700-01 | Rice | cytosol | 33.83 | 45.43 |
| Os11t0588400-01 | Rice | cytosol | 35.75 | 45.01 |
| HORVU1Hr1G004080.2 | Barley | cytosol, extracellular, nucleus | 27.64 | 44.52 |
| HORVU2Hr1G004070.4 | Barley | cytosol | 22.23 | 44.43 |
| HORVU7Hr1G023660.1 | Barley | cytosol | 8.72 | 43.29 |
| HORVU6Hr1G028220.1 | Barley | cytosol, extracellular | 30.86 | 42.4 |
| HORVU1Hr1G012190.1 | Barley | cytosol, plasma membrane | 29.21 | 41.1 |
| HORVU7Hr1G100280.2 | Barley | cytosol | 15.87 | 40.9 |
| HORVU7Hr1G000230.45 | Barley | cytosol | 29.82 | 40.43 |
| HORVU7Hr1G023820.2 | Barley | cytosol | 22.49 | 40.19 |
| HORVU7Hr1G095630.2 | Barley | cytosol | 32.35 | 39.89 |
| Os07t0294100-00 | Rice | cytosol | 24.24 | 39.32 |
| HORVU7Hr1G023770.1 | Barley | cytosol | 31.12 | 38.59 |
| HORVU3Hr1G104770.2 | Barley | cytosol, plasma membrane, plastid | 30.69 | 38.3 |
| HORVU5Hr1G068380.3 | Barley | cytosol | 30.25 | 37.76 |
| HORVU7Hr1G023750.1 | Barley | cytosol | 30.43 | 37.73 |
| HORVU2Hr1G040600.1 | Barley | cytosol | 28.33 | 37.62 |
| Os11t0590900-00 | Rice | cytosol | 13.69 | 37.29 |
| HORVU7Hr1G023730.1 | Barley | cytosol | 29.99 | 37.11 |
| HORVU3Hr1G014650.1 | Barley | cytosol | 18.66 | 36.9 |
| HORVU3Hr1G014690.1 | Barley | cytosol | 18.66 | 36.9 |
| HORVU3Hr1G014640.2 | Barley | cytosol | 18.74 | 36.88 |
| HORVU5Hr1G085330.5 | Barley | cytosol | 32.26 | 36.6 |
| HORVU7Hr1G121050.1 | Barley | cytosol | 22.32 | 36.42 |
| HORVU3Hr1G099360.5 | Barley | cytosol | 31.65 | 36.12 |
| HORVU3Hr1G105020.36 | Barley | plasma membrane | 15.95 | 36.09 |
| HORVU1Hr1G004140.1 | Barley | cytosol, plasma membrane | 26.33 | 36.04 |
| HORVU7Hr1G100300.4 | Barley | cytosol | 26.59 | 35.92 |
| HORVU5Hr1G085290.2 | Barley | plasma membrane | 31.12 | 35.81 |
| HORVU2Hr1G011300.1 | Barley | cytosol, nucleus, plastid | 28.6 | 35.38 |
| HORVU7Hr1G121150.11 | Barley | cytosol | 22.58 | 34.4 |
| HORVU7Hr1G100250.47 | Barley | cytosol | 30.86 | 34.3 |
| HORVU3Hr1G099740.7 | Barley | cytosol | 32.78 | 34.09 |
| HORVU2Hr1G122810.1 | Barley | cytosol | 27.03 | 32.53 |
| HORVU2Hr1G012010.2 | Barley | cytosol | 29.9 | 31.7 |
| HORVU7Hr1G023650.1 | Barley | cytosol, mitochondrion | 9.33 | 31.01 |
| KXG22895 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 30.78 | 30.43 |
| HORVU5Hr1G063690.7 | Barley | cytosol | 24.93 | 20.78 |
Protein Annotations
| Gene3D:1.20.1160.11 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A287T584 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043531 | EnsemblPlantsGene:HORVU6Hr1G002150 | EnsemblPlants:HORVU6Hr1G002150.4 | InterPro:IPR003822 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:PAH | InterPro:PAH_sf | PFAM:PF00931 |
| PFAM:PF02671 | PRINTS:PR00364 | PFscan:PS51477 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF23 | InterPro:RX-like_CC |
| SUPFAM:SSF47762 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000B487022 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr6H:+:6060610..6076045
Molecular Weight (calculated)
129650.0 Da
IEP (calculated)
6.228
GRAVY (calculated)
-0.094
Length
1147 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAMEFATGAM GTLLPKLGGL LLEEYNLKKS VKKGIGDLKK ELESMQAALV KLSSVPLDQL DHQVKIWANE VRELSYAIED SLDSSMVRIE GLEQTKPNIV
0101: GFFKKTRNKI TKFKARHEIA NNIKDIECKI MKVKERYERY KIDDVIPNPG ITTVDPRLSV LYRKASDLVG IAKAIDDIGK KLSMADDPSE KKATTISIVG
0201: SGGLGKTTLA KAVYDKHSKK FDCAGFVPVG RNPDIKKVLK DIIFEFDMQM YNAASTMDER QLINLLQKFL LDKKYLVVID DIWDIPTWEM IKFALVDGNP
0301: ESRIITTTRI CDVAKRIGGV YNIKPLSLDD SKILFYTRIF GDEGISLDDR STEVSNKIIK KCGGVPLSII TMASMLAGKS MDEWSMVYDS IGFGHGDNKV
0401: VQNTRKILSF SYYDLPFALK TCLLYISVYP EDSWIEKKSL IWRWIAEGFV PVTQGIGLFQ LGERFFDELT NRSMIRLIEP SAGNTLIGCR VHDMVLDLIR
0501: SLSSELNFAT LQDREHHNIC SMSGNNSVHR LALHKISEDH NPISMEIGQV RSFHASLCCG SRMPSVSRFR VLRVLALDHC DIIGQDYGLE HLGKLVQLRY
0601: IGLVETHISE LPKEIGHDLK FVQTLDVRGS GVQELPASVG ELSKLMCLRA SEGTRMMAGI GRLLFLEELE LHSLDKSLSF ATELGKLTEM RVLVVHFDEM
0701: GACVQEALVE SLQNLAKIQT LEIWSHTKGI VQLDCLDEWV PSSELRQLKL CGIILRGRPS WMESSCVPHL SYLMFTAKVV EARDLQILGM LPSLGYLYIW
0801: IEDICLSYTI CSNDFRNLRH LNTNIEIMCG EGALPMLHEL VCSASVGTGV GLVWNMPLLD CITYLLGCEI CSSAEDGVLP GVPVHDIGCG VGDDVSGKVN
0901: MPFLETITYL LNCGDCSYED VEKAEDALQR ASKIHQNCPT LKIQRYSYTK SNTNNVFAYL LTVKDTFREE QAKYEEFLEI MLSFRHNRID SENVIIRVKT
1001: LFNGYPELLF GFNFMMPMDY KIRPQNNTIE FVEAISFVNK IKSRFQQEDH VYMSFLAILS TYRMHDQSTQ DAYDTCIILF QDHPDLLQFF KYFFPGRSAT
1101: APTVALPRHL SQIKRDARNA QSKKLYDEDK DGRSQDDLDD FVLSLLS
0101: GFFKKTRNKI TKFKARHEIA NNIKDIECKI MKVKERYERY KIDDVIPNPG ITTVDPRLSV LYRKASDLVG IAKAIDDIGK KLSMADDPSE KKATTISIVG
0201: SGGLGKTTLA KAVYDKHSKK FDCAGFVPVG RNPDIKKVLK DIIFEFDMQM YNAASTMDER QLINLLQKFL LDKKYLVVID DIWDIPTWEM IKFALVDGNP
0301: ESRIITTTRI CDVAKRIGGV YNIKPLSLDD SKILFYTRIF GDEGISLDDR STEVSNKIIK KCGGVPLSII TMASMLAGKS MDEWSMVYDS IGFGHGDNKV
0401: VQNTRKILSF SYYDLPFALK TCLLYISVYP EDSWIEKKSL IWRWIAEGFV PVTQGIGLFQ LGERFFDELT NRSMIRLIEP SAGNTLIGCR VHDMVLDLIR
0501: SLSSELNFAT LQDREHHNIC SMSGNNSVHR LALHKISEDH NPISMEIGQV RSFHASLCCG SRMPSVSRFR VLRVLALDHC DIIGQDYGLE HLGKLVQLRY
0601: IGLVETHISE LPKEIGHDLK FVQTLDVRGS GVQELPASVG ELSKLMCLRA SEGTRMMAGI GRLLFLEELE LHSLDKSLSF ATELGKLTEM RVLVVHFDEM
0701: GACVQEALVE SLQNLAKIQT LEIWSHTKGI VQLDCLDEWV PSSELRQLKL CGIILRGRPS WMESSCVPHL SYLMFTAKVV EARDLQILGM LPSLGYLYIW
0801: IEDICLSYTI CSNDFRNLRH LNTNIEIMCG EGALPMLHEL VCSASVGTGV GLVWNMPLLD CITYLLGCEI CSSAEDGVLP GVPVHDIGCG VGDDVSGKVN
0901: MPFLETITYL LNCGDCSYED VEKAEDALQR ASKIHQNCPT LKIQRYSYTK SNTNNVFAYL LTVKDTFREE QAKYEEFLEI MLSFRHNRID SENVIIRVKT
1001: LFNGYPELLF GFNFMMPMDY KIRPQNNTIE FVEAISFVNK IKSRFQQEDH VYMSFLAILS TYRMHDQSTQ DAYDTCIILF QDHPDLLQFF KYFFPGRSAT
1101: APTVALPRHL SQIKRDARNA QSKKLYDEDK DGRSQDDLDD FVLSLLS
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.