Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G035400.1 | Wheat | cytosol | 85.42 | 76.16 |
| TraesCS1A01G028700.2 | Wheat | cytosol | 86.81 | 61.12 |
| HORVU7Hr1G023660.1 | Barley | cytosol | 40.28 | 50.22 |
| HORVU7Hr1G100280.2 | Barley | cytosol | 50.69 | 32.81 |
| HORVU1Hr1G004080.2 | Barley | cytosol, extracellular, nucleus | 77.43 | 31.32 |
| HORVU2Hr1G004070.4 | Barley | cytosol | 62.15 | 31.18 |
| HORVU2Hr1G004150.3 | Barley | cytosol | 58.68 | 30.12 |
| TraesCS1D01G028200.1 | Wheat | cytosol | 90.28 | 27.14 |
| HORVU1Hr1G012190.1 | Barley | cytosol, plasma membrane | 76.74 | 27.12 |
| TraesCS1D01G029200.3 | Wheat | cytosol | 86.81 | 26.23 |
| TraesCS1B01G034500.1 | Wheat | cytosol | 85.42 | 25.81 |
| HORVU5Hr1G085330.5 | Barley | cytosol | 63.19 | 18.0 |
| HORVU5Hr1G085290.2 | Barley | plasma membrane | 61.81 | 17.85 |
| HORVU6Hr1G028220.1 | Barley | cytosol, extracellular | 48.26 | 16.65 |
| HORVU1Hr1G004140.1 | Barley | cytosol, plasma membrane | 45.14 | 15.51 |
| HORVU2Hr1G040600.1 | Barley | cytosol | 46.53 | 15.51 |
| HORVU3Hr1G104770.2 | Barley | cytosol, plasma membrane, plastid | 48.61 | 15.23 |
| HORVU3Hr1G099360.5 | Barley | cytosol | 53.12 | 15.22 |
| HORVU7Hr1G023750.1 | Barley | cytosol | 48.26 | 15.03 |
| HORVU7Hr1G023770.1 | Barley | cytosol | 47.92 | 14.92 |
| HORVU7Hr1G023730.1 | Barley | cytosol | 47.92 | 14.89 |
| HORVU7Hr1G095630.2 | Barley | cytosol | 47.92 | 14.84 |
| HORVU7Hr1G100250.47 | Barley | cytosol | 51.74 | 14.44 |
| HORVU5Hr1G068380.3 | Barley | cytosol | 44.79 | 14.04 |
| Os11t0657900-00 | Rice | cytosol | 48.26 | 13.5 |
| HORVU2Hr1G122810.1 | Barley | cytosol | 44.44 | 13.43 |
| HORVU2Hr1G011300.1 | Barley | cytosol, nucleus, plastid | 42.36 | 13.16 |
| HORVU3Hr1G099740.7 | Barley | cytosol | 48.26 | 12.6 |
| HORVU7Hr1G000230.45 | Barley | cytosol | 36.11 | 12.29 |
| HORVU6Hr1G002150.4 | Barley | cytosol, golgi, nucleus | 47.57 | 11.94 |
| HORVU7Hr1G100300.4 | Barley | cytosol | 32.99 | 11.19 |
| HORVU2Hr1G012010.2 | Barley | cytosol | 40.62 | 10.81 |
| HORVU7Hr1G023820.2 | Barley | cytosol | 23.61 | 10.59 |
| HORVU5Hr1G063690.7 | Barley | cytosol | 39.93 | 8.36 |
| HORVU7Hr1G023650.1 | Barley | cytosol, mitochondrion | 3.82 | 3.19 |
| HORVU7Hr1G121050.1 | Barley | cytosol | 6.94 | 2.84 |
| HORVU7Hr1G121150.11 | Barley | cytosol | 6.94 | 2.66 |
| HORVU3Hr1G105020.36 | Barley | plasma membrane | 0.69 | 0.39 |
| TraesCS1A01G028800.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 0.69 | 0.37 |
| HORVU3Hr1G014640.2 | Barley | cytosol | 0.69 | 0.34 |
| HORVU3Hr1G014650.1 | Barley | cytosol | 0.35 | 0.17 |
| HORVU3Hr1G014690.1 | Barley | cytosol | 0.35 | 0.17 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G012180.1 | EnsemblPlantsGene:HORVU1Hr1G012180 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR44382 |
| PANTHER:PTHR44382:SF1 | PFAM:PF00931 | PRINTS:PR00364 | SUPFAM:SSF52540 | UniParc:UPI000B4646C8 | UniProt:A0A287ENF7 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:30263786..30268673
Molecular Weight (calculated)
32813.0 Da
IEP (calculated)
7.275
GRAVY (calculated)
-0.377
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIVTGAMGS LIPKLGELLV EEYKLHKRVK KDVEFLRKEL ESMHAALIKV GEVPRDKLDR QVKLWADEVR ELSYNMEDVV DKFLVRVDGD GIRQPHDNSG
101: RFKELNNKMI GLFKKGKNHH HIADAIKGIK EQLQEVAARR DRNKVIVPNP TEPIAIDPCL RALYTESSEL VGIYGERDQD FMRLLSMEGD DASEKRLKKV
201: SIVGFGGLGK TTLARAVDEK IKGDFDCRAF VPVGQNTDMK KVLRDILIDL GNPHSDLVIL DVNQLIKKLH EFLENKRYLI IIDDIYMG
101: RFKELNNKMI GLFKKGKNHH HIADAIKGIK EQLQEVAARR DRNKVIVPNP TEPIAIDPCL RALYTESSEL VGIYGERDQD FMRLLSMEGD DASEKRLKKV
201: SIVGFGGLGK TTLARAVDEK IKGDFDCRAF VPVGQNTDMK KVLRDILIDL GNPHSDLVIL DVNQLIKKLH EFLENKRYLI IIDDIYMG
001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC
Arabidopsis Description
RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.