Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
29385242
|
msms PMID:
29385242
doi
Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G012190.1 | Barley | cytosol, plasma membrane | 61.69 | 63.44 |
| HORVU1Hr1G004080.2 | Barley | cytosol, extracellular, nucleus | 53.58 | 63.06 |
| HORVU2Hr1G004070.4 | Barley | cytosol | 32.58 | 47.56 |
| HORVU2Hr1G004150.3 | Barley | cytosol | 31.15 | 46.52 |
| HORVU5Hr1G085290.2 | Barley | plasma membrane | 55.01 | 46.24 |
| HORVU5Hr1G085330.5 | Barley | cytosol | 55.37 | 45.9 |
| HORVU1Hr1G012180.1 | Barley | cytosol | 15.51 | 45.14 |
| HORVU7Hr1G023820.2 | Barley | cytosol | 33.41 | 43.61 |
| HORVU3Hr1G105020.36 | Barley | plasma membrane | 24.58 | 40.63 |
| HORVU7Hr1G121050.1 | Barley | cytosol | 33.65 | 40.11 |
| HORVU6Hr1G028220.1 | Barley | cytosol, extracellular | 38.9 | 39.04 |
| HORVU3Hr1G104770.2 | Barley | cytosol, plasma membrane, plastid | 42.48 | 38.74 |
| HORVU7Hr1G000230.45 | Barley | cytosol | 37.83 | 37.47 |
| HORVU7Hr1G121150.11 | Barley | cytosol | 33.65 | 37.45 |
| HORVU3Hr1G099360.5 | Barley | cytosol | 44.75 | 37.31 |
| HORVU7Hr1G095630.2 | Barley | cytosol | 40.93 | 36.88 |
| HORVU7Hr1G023770.1 | Barley | cytosol | 40.57 | 36.76 |
| HORVU3Hr1G014640.2 | Barley | cytosol | 25.18 | 36.19 |
| HORVU3Hr1G014650.1 | Barley | cytosol | 24.94 | 36.03 |
| HORVU3Hr1G014690.1 | Barley | cytosol | 24.94 | 36.03 |
| HORVU7Hr1G023730.1 | Barley | cytosol | 38.07 | 34.41 |
| HORVU7Hr1G023750.1 | Barley | cytosol | 37.11 | 33.62 |
| HORVU5Hr1G068380.3 | Barley | cytosol | 36.28 | 33.08 |
| HORVU7Hr1G100300.4 | Barley | cytosol | 33.41 | 32.98 |
| HORVU2Hr1G040600.1 | Barley | cytosol | 33.89 | 32.87 |
| Os11t0657900-00 | Rice | cytosol | 39.74 | 32.33 |
| HORVU7Hr1G023650.1 | Barley | cytosol, mitochondrion | 12.89 | 31.3 |
| HORVU2Hr1G011300.1 | Barley | cytosol, nucleus, plastid | 34.13 | 30.85 |
| HORVU2Hr1G122810.1 | Barley | cytosol | 34.84 | 30.64 |
| HORVU7Hr1G100280.2 | Barley | cytosol | 16.11 | 30.34 |
| HORVU2Hr1G012010.2 | Barley | cytosol | 38.42 | 29.76 |
| HORVU7Hr1G100250.47 | Barley | cytosol | 34.96 | 28.39 |
| HORVU3Hr1G099740.7 | Barley | cytosol | 36.04 | 27.38 |
| HORVU6Hr1G002150.4 | Barley | cytosol, golgi, nucleus | 36.04 | 26.33 |
| HORVU7Hr1G023660.1 | Barley | cytosol | 5.73 | 20.78 |
| HORVU5Hr1G063690.7 | Barley | cytosol | 31.15 | 18.97 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G004140.1 | EnsemblPlantsGene:HORVU1Hr1G004140 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR43889 | PANTHER:PTHR43889:SF25 | PFAM:PF00931 | PRINTS:PR00364 | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI000B4783CF | UniProt:A0A287EHX7 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:8764853..8769117
Molecular Weight (calculated)
94717.8 Da
IEP (calculated)
6.476
GRAVY (calculated)
-0.130
Length
838 amino acids
Sequence
(BLAST)
(BLAST)
001: IKEQLQEVAA RRDRNKVEGI ASNPMEAIPI DPCLRALYAE ATELVGIYGK RDEDIMRLLS MEGEDDASNK RLKKVSIVGF GGLGKTTLAK AVYENIKGDF
101: DCRAFVPVGQ NPDMKKVFRD ILIDLRVSNS ELAELDERQL INKLHEFLEN KRYLVIIDDI WDAKLWERIN FAFSNRNNLG SRLIITTRIF SVSKSSCMLP
201: DDAVYEMKPL SDDDSRSLFY KRIFPSESGC PNEFEQVSED ILKKCGGVPL AIITIASSLA SGQKVKPKSE WDILLQSLGS GLTKDNSLEE MRRILSFSYY
301: DLPDHLKTCL LYLCIYPEDS MIDRDRLIWK WVAEGFIHQG NQGTSLFLLG LNYFNQLINR SMIQPIYDGL GEVSACRVHD MVLDLICNLS HEAKFVNVLN
401: GTRDSMSSQS NVRRLSLQDG SKDHQGRPLR NFTGISRVRS ITIFPPAINI MPALSRLEVL RVLDLYHCNL GKNSSLQHRL RDVGHLIHLR YLGLAGTKIS
501: ELPAEIGNLQ FLEVLDLEDN SELRNLSSTI CKLRRLICLH VHRDEVAPGV LQNLTSIEVL RRLVVSLNTV AQELGNLVRL RELLVCFINV GLDLYEGFVK
601: SVCNLHHIES LRIYSVRASS ELMDLLGERW VPPGHLRRFE AHMPSQLSAL RGWIMRDPLH LSNLSDLVLT SVKEVQQEDM EIIGGLLSLR GLQIKSTQQT
701: QRLLVIRADV FRCMICFDLD CGSGAQIVFE PGALPRTEGL RFSLGVRVTK EDGNHGFDLG LQGNLLSLRT FVWVQIYCGG ARVGEAKEAD AVVRHTLRSH
801: PNHPGIISLM FNMIPNIAED AHDDDLCEHE EKKECDFL
101: DCRAFVPVGQ NPDMKKVFRD ILIDLRVSNS ELAELDERQL INKLHEFLEN KRYLVIIDDI WDAKLWERIN FAFSNRNNLG SRLIITTRIF SVSKSSCMLP
201: DDAVYEMKPL SDDDSRSLFY KRIFPSESGC PNEFEQVSED ILKKCGGVPL AIITIASSLA SGQKVKPKSE WDILLQSLGS GLTKDNSLEE MRRILSFSYY
301: DLPDHLKTCL LYLCIYPEDS MIDRDRLIWK WVAEGFIHQG NQGTSLFLLG LNYFNQLINR SMIQPIYDGL GEVSACRVHD MVLDLICNLS HEAKFVNVLN
401: GTRDSMSSQS NVRRLSLQDG SKDHQGRPLR NFTGISRVRS ITIFPPAINI MPALSRLEVL RVLDLYHCNL GKNSSLQHRL RDVGHLIHLR YLGLAGTKIS
501: ELPAEIGNLQ FLEVLDLEDN SELRNLSSTI CKLRRLICLH VHRDEVAPGV LQNLTSIEVL RRLVVSLNTV AQELGNLVRL RELLVCFINV GLDLYEGFVK
601: SVCNLHHIES LRIYSVRASS ELMDLLGERW VPPGHLRRFE AHMPSQLSAL RGWIMRDPLH LSNLSDLVLT SVKEVQQEDM EIIGGLLSLR GLQIKSTQQT
701: QRLLVIRADV FRCMICFDLD CGSGAQIVFE PGALPRTEGL RFSLGVRVTK EDGNHGFDLG LQGNLLSLRT FVWVQIYCGG ARVGEAKEAD AVVRHTLRSH
801: PNHPGIISLM FNMIPNIAED AHDDDLCEHE EKKECDFL
001: MAGELVSFGI KKLWDLLSQE CEQFQGVEDQ VTGLKRDLNL LSSFLKDADA KKHTTAVVRN VVEEIKEIVY DAEDIIETYL LKEKLWKTSG IKMRIRRHAC
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK
Arabidopsis Description
Probable disease resistance protein At1g58390 [Source:UniProtKB/Swiss-Prot;Acc:Q8W474]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.