Factsheet for HORVU1Hr1G012190.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G028600.3	Wheat	cytosol	56.81	78.74
HORVU1Hr1G004080.2	Barley	cytosol, extracellular, nucleus	67.85	77.67
HORVU1Hr1G012180.1	Barley	cytosol	27.12	76.74
TraesCS1A01G026400.2	Wheat	cytosol	83.19	70.77
TraesCS1A01G029100.1	Wheat	cytosol	77.79	66.6
TraesCS1A01G028400.1	Wheat	cytosol, peroxisome, plasma membrane	77.55	66.53
TraesCS1D01G029100.2	Wheat	cytosol	76.69	62.38
HORVU1Hr1G004140.1	Barley	cytosol, plasma membrane	63.44	61.69
HORVU2Hr1G004070.4	Barley	cytosol	41.96	59.58
TraesCS1A01G041100.1	Wheat	cytosol	44.29	58.51
TraesCS1D01G028700.1	Wheat	cytosol	39.51	58.02
HORVU2Hr1G004150.3	Barley	cytosol	39.63	57.58
HORVU6Hr1G028220.1	Barley	cytosol, extracellular	47.24	46.11
HORVU5Hr1G085290.2	Barley	plasma membrane	55.71	45.54
HORVU5Hr1G085330.5	Barley	cytosol	56.07	45.2
HORVU7Hr1G023660.1	Barley	cytosol	12.39	43.72
HORVU7Hr1G100280.2	Barley	cytosol	23.56	43.15
HORVU7Hr1G023820.2	Barley	cytosol	33.37	42.37
HORVU3Hr1G104770.2	Barley	cytosol, plasma membrane, plastid	45.28	40.15
HORVU7Hr1G023770.1	Barley	cytosol	43.93	38.7
HORVU7Hr1G095630.2	Barley	cytosol	44.05	38.6
HORVU3Hr1G099360.5	Barley	cytosol	46.26	37.51
HORVU7Hr1G121050.1	Barley	cytosol	31.53	36.56
HORVU7Hr1G023730.1	Barley	cytosol	41.35	36.35
HORVU7Hr1G000230.45	Barley	cytosol	37.67	36.29
HORVU7Hr1G023750.1	Barley	cytosol	40.74	35.89
HORVU2Hr1G040600.1	Barley	cytosol	37.3	35.19
HORVU5Hr1G068380.3	Barley	cytosol	38.77	34.39
HORVU7Hr1G121150.11	Barley	cytosol	31.53	34.13
Os11t0657900-00	Rice	cytosol	42.94	33.98
HORVU2Hr1G122810.1	Barley	cytosol	38.77	33.16
HORVU3Hr1G105020.36	Barley	plasma membrane	20.61	33.14
HORVU2Hr1G011300.1	Barley	cytosol, nucleus, plastid	37.67	33.12
HORVU7Hr1G100300.4	Barley	cytosol	33.87	32.51
HORVU3Hr1G014690.1	Barley	cytosol	22.21	31.21
HORVU3Hr1G014650.1	Barley	cytosol	22.21	31.21
HORVU7Hr1G100250.47	Barley	cytosol	39.51	31.2
HORVU3Hr1G014640.2	Barley	cytosol	22.09	30.87
HORVU2Hr1G012010.2	Barley	cytosol	40.74	30.68
HORVU6Hr1G002150.4	Barley	cytosol, golgi, nucleus	41.1	29.21
HORVU3Hr1G099740.7	Barley	cytosol	38.28	28.29
HORVU7Hr1G023650.1	Barley	cytosol, mitochondrion	10.31	24.35
HORVU5Hr1G063690.7	Barley	cytosol	33.87	20.06

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A287ENE4	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	EnsemblPlantsGene:HORVU1Hr1G012190	EnsemblPlants:HORVU1Hr1G012190.1
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000B46DFFF

Description

No Description!

Coordinates

chrchr1H:-:30295692..30299688

Molecular Weight (calculated)

92530.3 Da

IEP (calculated)

6.432

GRAVY (calculated)

-0.178

Length

815 amino acids

Sequence
(BLAST)

001: MDIVTGAISN LIPKLGELLT EEFKLHKGVK ENIEDLGKEL ESMNASLIKI GEVPREQLDI QDKLWADEVR ELSYVIEDVV DKFLVQVDGI QSDDNNNKFK
101: GLMKRTTELL KKVKHKHGIA HAIKDIQQQL QNVADRRDRN KVFVPHPTRP IDIDPCLRAL YAEATELVGI YGKRDQDLMR LLSMEGDDAS NKRLKKVSIV
201: GFGGLGKTTL ARAVYEKIKG DFNCRAFVPI GQNPDMKKVL RDILIDLGNP HSDLAMLDAN QLIKKLHEFL ENKRYLVIID DIWDEKLWEG INFAFSNRNN
301: LGSRLITTTR IVSVSNSCCS SDGDSVYQME PLSVDDSRML FYKRIFPDEN GCVNEFEQVS RDILKKCGGV PLAIITIASA LAGDQKMKPK CEWDILLQSL
401: GSGLTEDNSL EEMRRILSFS YSNLPSHLKT CLLYLCVYPE DSMISRDKLI WKWVAGGFVH HENQGNSLYL LGLNYFNHLI NRSMIQPIYN YSGEAYACRV
501: HDMVLDLICN LSHEAKFVNL LDGTGNISCR RLSLQKRNED HQAKPLTNIK SMSRVRSITI FRPAIEVMPS LQRFEVLRVL DLSGCNLGEN SNLQLNLKDV
601: GQLIHLRYLG LEGTQISKLP VEIGKLQFLE VLDLENNHNL KELPSTVCNF RRLIYLNLVS CEVVPPVGVL QNLTSIEVLR DILVSLNIIA QELGNLKRLR
701: ELDICFSDDS FDLYEGFVKS LCNLHHIERL SIDCNSRETS SFELMDLLGE RWVPPVHLRE FMSSMSCQLC ALRGWIKRDP SHLSNLSKLI LGRVKEVQQE
801: DVEIIGGCCP FVVSG

Best Arabidopsis Sequence Match ( AT1G58390.1 )
(BLAST)

001: MAGELVSFGI KKLWDLLSQE CEQFQGVEDQ VTGLKRDLNL LSSFLKDADA KKHTTAVVRN VVEEIKEIVY DAEDIIETYL LKEKLWKTSG IKMRIRRHAC
101: IISDRRRNAL DVGGIRTRIS DVIRDMQSFG VQQAIVDGGY MQPQGDRQRE MRQTFSKDYE SDFVGLEVNV KKLVGYLVDE ENVQVVSITG MGGLGKTTLA
201: RQVFNHEDVK HQFDRLAWVC VSQEFTRKNV WQMILQNLTS REKKDEILQM EEAELHDKLF QLLETSKSLI VFDDIWKDED WDLIKPIFPP NKGWKVLLTS
301: QNESVAVRGD IKYLNFKPEC LAIEDSWTLF QRIAFPKKDA SESKVDEEME DMGKQMLKHC GGLPLAIKVL GGLLAAKYTM HDWERLSVNI GSDIVGRTSS
401: NNSSIYHVLS MSFEELPSYL KHCFLYLAHF PEDHKINVEK LSYCWAAEGI STAEDYHNGE TIQDVGQSYL EELVRRNMII WERDATASRF GTCHLHDMMR
501: EVCLFKAKEE NFLQIAVKSV GVTSSSTGNS QSPCRSRRLV YQCPTTLHVE RDINNPKLRS LVVLWHDLWV ENWKLLGTSF TRLKLLRVLD LFYVDFEGMK
601: LPFGIGNLIH LRYLSLQDAK VSHLPSSLGN LMLLIYLNLD VDTEFIFVPD VFMRMHELRY LKLPLHMHKK TRLSLRNLVK LETLVYFSTW HSSSKDLCGM
701: TRLMTLAIRL TRVTSTETLS ASISGLRNLE YLYIVGTHSK KMREEGIVLD FIHLKHLLLD LYMPRQQHFP SRLTFVKLSE CGLEEDPMPI LEKLLHLKGV
801: ILLKGSYCGR RMVCSGGGFP QLKKLEIVGL NKWEEWLVEE GSMPLLETLS ILDCEELKEI PDGLRFIYSL ELVMLGTRWK KKFSVGGEDY YKVQHIPSVE
901: FIGGYLK

Arabidopsis Description

Probable disease resistance protein At1g58390 [Source:UniProtKB/Swiss-Prot;Acc:Q8W474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.