Factsheet for TraesCS1A01G028400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G026400.2	Wheat	cytosol	82.42	81.73
TraesCS1A01G028600.3	Wheat	cytosol	49.89	80.61
HORVU1Hr1G012190.1	Barley	cytosol, plasma membrane	66.53	77.55
TraesCS1A01G029100.1	Wheat	cytosol	77.47	77.31
TraesCS1A01G041100.1	Wheat	cytosol	50.0	76.99
TraesCS1A01G028900.1	Wheat	cytosol	76.32	75.6
TraesCS1D01G028700.1	Wheat	cytosol	44.11	75.5
TraesCS1A01G028700.2	Wheat	cytosol	32.42	75.31
TraesCS1A01G028500.3	Wheat	cytosol, extracellular, plasma membrane	75.58	75.03
TraesCS1A01G028800.1	Wheat	cytosol, golgi, mitochondrion, plastid	42.53	74.54
TraesCS1A01G026300.1	Wheat	endoplasmic reticulum	23.89	68.58
TraesCS5A01G340600.1	Wheat	cytosol	37.58	60.1
TraesCS7A01G472100.1	Wheat	cytosol	18.42	59.73
TraesCS2A01G026100.1	Wheat	cytosol	28.53	58.03
TraesCS7A01G064000.1	Wheat	cytosol	51.89	52.84
TraesCS7A01G005000.1	Wheat	cytosol	15.89	52.61
TraesCS3A01G536200.1	Wheat	cytosol, endoplasmic reticulum	27.37	51.69
TraesCS2A01G026400.1	Wheat	cytosol	51.26	51.05
TraesCS2A01G026300.1	Wheat	cytosol	16.0	51.01
TraesCS1A01G267100.1	Wheat	cytosol, nucleus, plasma membrane	53.68	50.65
TraesCS7A01G008400.1	Wheat	cytosol, extracellular	12.84	49.59
TraesCS4A01G488700.1	Wheat	cytosol	25.47	48.69
TraesCS7A01G110800.1	Wheat	cytosol	23.05	48.34
TraesCS7A01G111100.1	Wheat	cytosol	26.0	48.34
TraesCS4A01G492100.1	Wheat	cytosol	31.47	47.31
TraesCS6A01G009600.1	Wheat	nucleus	13.89	46.98
TraesCS6A01G009500.1	Wheat	cytosol	22.63	46.74
TraesCS3A01G479200.1	Wheat	extracellular, plasma membrane	37.68	46.25
TraesCS7A01G110300.1	Wheat	cytosol	20.84	46.05
TraesCS3A01G478900.1	Wheat	cytosol	14.0	46.02
TraesCS3A01G479100.1	Wheat	extracellular, plasma membrane	43.79	45.22
TraesCS1A01G004000.1	Wheat	cytosol	35.37	44.92
TraesCS3A01G479400.2	Wheat	extracellular, plasma membrane	43.05	44.36
TraesCS2A01G564600.1	Wheat	cytosol	17.37	44.24
TraesCS7A01G004900.1	Wheat	cytosol	43.26	44.05
TraesCS4A01G488200.1	Wheat	cytosol	32.95	43.41
TraesCS3A01G479300.1	Wheat	cytosol	7.89	43.1
TraesCS3A01G479000.1	Wheat	cytosol	26.32	42.73
TraesCS4A01G488800.1	Wheat	cytosol	34.63	42.34
TraesCS7A01G110700.1	Wheat	cytosol	40.84	41.99
TraesCS7A01G111200.1	Wheat	cytosol	40.63	41.77
TraesCS4A01G493900.1	Wheat	cytosol, extracellular	40.0	41.71
TraesCS7A01G006500.1	Wheat	cytosol	39.79	41.4
TraesCS4A01G486500.2	Wheat	cytosol, extracellular	40.42	41.25
TraesCS7A01G008500.1	Wheat	cytosol, vacuole	39.79	41.04
TraesCS7A01G005600.1	Wheat	cytosol	37.47	40.92
TraesCS7A01G111000.1	Wheat	cytosol	40.95	40.9
TraesCS1A01G009900.2	Wheat	cytosol	35.68	40.17
TraesCS1A01G004100.1	Wheat	cytosol	34.74	39.1
TraesCS7A01G551900.1	Wheat	cytosol	35.05	39.08
TraesCS4A01G493500.2	Wheat	cytosol	26.11	38.87
TraesCS4A01G474900.1	Wheat	cytosol, endoplasmic reticulum	37.68	38.83
TraesCS5A01G493600.1	Wheat	plasma membrane	37.16	38.33
TraesCS6A01G010100.1	Wheat	cytosol	37.58	38.3
TraesCS7A01G555200.1	Wheat	cytosol	10.84	38.29
Os11t0657900-00	Rice	cytosol	41.47	38.25
TraesCS4A01G489800.1	Wheat	cytosol	36.42	38.06
TraesCS4A01G490200.1	Wheat	cytosol	25.26	37.09
TraesCS3A01G081800.1	Wheat	cytosol	27.05	36.71
TraesCS2A01G564500.1	Wheat	extracellular, plasma membrane	19.68	35.69
TraesCS7A01G440200.2	Wheat	cytosol	36.42	35.67
TraesCS6A01G010400.1	Wheat	cytosol	38.0	35.25
TraesCS6A01G009900.1	Wheat	cytosol	37.05	34.96
TraesCS7A01G110900.1	Wheat	cytosol	15.58	34.66
TraesCS6A01G009700.1	Wheat	cytosol	37.89	34.65
TraesCS2A01G070600.1	Wheat	endoplasmic reticulum, extracellular	41.05	34.45
TraesCS2A01G070700.2	Wheat	extracellular	40.0	33.72
TraesCS2A01G575100.1	Wheat	endoplasmic reticulum, golgi, plastid	25.79	33.42
TraesCS4A01G487900.1	Wheat	cytosol	15.05	31.57
TraesCS2A01G585200.1	Wheat	cytosol	36.11	31.55
TraesCS2A01G568900.1	Wheat	plasma membrane	30.32	22.14
TraesCS7A01G440000.1	Wheat	cytosol	37.68	19.52
TraesCS2A01G569200.1	Wheat	cytosol, plasma membrane, plastid	31.47	19.25

Protein Annotations

EnsemblPlants:TraesCS1A01G028400.1	EnsemblPlantsGene:TraesCS1A01G028400	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr1A:+:13312907..13320055

Molecular Weight (calculated)

107680.0 Da

IEP (calculated)

7.883

GRAVY (calculated)

-0.101

Length

950 amino acids

Sequence
(BLAST)

001: MDIVTGAIAK LIPKLADLLV GVYKLHKNVK KNIEDLLKEL ESMNVALVKI GEVPRDQLDK QDKLWADEVR ELSYIIEDVI DKFLVRVNHI QPDDTTNKFK
101: RLMKRTTKLL KKVKDKYGIA HAIKDIQEQL QKVAARRDRN KVVVPNPTEP ISIDPCLRAL YTEATELVGI YGKRDQELMR LLSMERDDAS NNRLKKVSIV
201: GFGGLGKTTL ARAVYDKIKG DFDCRAFVPV GQNPDMKKVL RDILIDLGNP HSDLAILDAN QLIKMLHEFL ENKRYLVIID DIWDEKLWEG INFAFSSKNN
301: LRCRLITTTR IVSVSNSCCS SADDSVYQMK PLSSDDSRRL FHKRIFPDDS GCPNEYEQVS KDILKKCGGV PLAIITIASV LTSDQQVKTK HEWDILLQFL
401: GSGLTEDNSL EEMRRILSFS YYNLPSHLKT CLLYLCIYPE DTMIDRDRLI WKWVAEGFVH HGKQGTSLFL VGLNYFNQLI NRSMIQPIYN DLGQVYACRV
501: HDMVLGLLCN LSHAAKFVKL LDGTRYNMSS QSNVRRLSLQ DGNEDQQIMP LTNFVRSITV FPPAVSIMPA LSKFEVLRVL DLSDCYLKRS SSLQLNLKDV
601: GHLIHLRYLG LARTGISELP AEIGNLQFLE VLNIGSSSQL SRLPSIVCKL RRLLCLNVCL SEVVPAGVLQ NLTSIEVLKN ILVCLNVIAQ ELGNLVRLRE
701: LVVSFKNGSL HLYEGFVESL CNLHHIEILS IYRHSSETSF ELMDLLGERW VPPVHLREFI SWMPSKLSAL RRWIKKDPSH LSNLSELTLS RVNDVQQEDV
801: EIIGRLLSLR RLRIKSTHQT QRLLVIRADG FCCMVEFILY CGSAAQIMFE PGALPRAEKV RFSLGVHVAK EDGNYGFDLG LQGNLLSLRR EVCVYLCCGG
901: ARVGDAKEAE AAVRHALDGH PNHPWIGIEM NPNIAQGAHD DDFCKDVVEN

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.