Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G012180.1 | Barley | cytosol | 61.12 | 86.81 |
| TraesCS1A01G026300.1 | Wheat | endoplasmic reticulum | 62.59 | 77.34 |
| TraesCS7A01G472100.1 | Wheat | cytosol | 48.41 | 67.58 |
| TraesCS2A01G026300.1 | Wheat | cytosol | 41.08 | 56.38 |
| TraesCS7A01G005000.1 | Wheat | cytosol | 39.36 | 56.1 |
| TraesCS7A01G008400.1 | Wheat | cytosol, extracellular | 32.03 | 53.25 |
| TraesCS2A01G026100.1 | Wheat | cytosol | 59.17 | 51.82 |
| TraesCS1A01G028600.3 | Wheat | cytosol | 70.42 | 48.98 |
| TraesCS3A01G478900.1 | Wheat | cytosol | 33.74 | 47.75 |
| TraesCS6A01G009600.1 | Wheat | nucleus | 32.76 | 47.69 |
| TraesCS7A01G110300.1 | Wheat | cytosol | 47.68 | 45.35 |
| TraesCS2A01G564600.1 | Wheat | cytosol | 41.08 | 45.04 |
| TraesCS3A01G479300.1 | Wheat | cytosol | 19.07 | 44.83 |
| TraesCS7A01G110800.1 | Wheat | cytosol | 47.68 | 43.05 |
| TraesCS5A01G340600.1 | Wheat | cytosol | 60.39 | 41.58 |
| TraesCS7A01G555200.1 | Wheat | cytosol | 27.14 | 41.26 |
| TraesCS3A01G536200.1 | Wheat | cytosol, endoplasmic reticulum | 49.88 | 40.56 |
| TraesCS4A01G488700.1 | Wheat | cytosol | 48.17 | 39.64 |
| TraesCS6A01G009500.1 | Wheat | cytosol | 44.01 | 39.13 |
| TraesCS1D01G028200.1 | Wheat | cytosol | 91.2 | 38.94 |
| TraesCS7A01G111100.1 | Wheat | cytosol | 47.43 | 37.96 |
| TraesCS1B01G034500.1 | Wheat | cytosol | 87.53 | 37.57 |
| TraesCS1A01G028900.1 | Wheat | cytosol | 79.71 | 33.99 |
| TraesCS1A01G028500.3 | Wheat | cytosol, extracellular, plasma membrane | 79.46 | 33.96 |
| TraesCS1A01G028400.1 | Wheat | cytosol, peroxisome, plasma membrane | 75.31 | 32.42 |
| TraesCS1A01G026400.2 | Wheat | cytosol | 74.82 | 31.94 |
| TraesCS4A01G492100.1 | Wheat | cytosol | 48.9 | 31.65 |
| TraesCS1A01G029100.1 | Wheat | cytosol | 72.86 | 31.3 |
| TraesCS4A01G488200.1 | Wheat | cytosol | 47.68 | 27.05 |
| TraesCS7A01G064000.1 | Wheat | cytosol | 59.9 | 26.26 |
| TraesCS1A01G267100.1 | Wheat | cytosol, nucleus, plasma membrane | 62.59 | 25.42 |
| TraesCS3A01G479200.1 | Wheat | extracellular, plasma membrane | 47.92 | 25.32 |
| TraesCS2A01G026400.1 | Wheat | cytosol | 58.92 | 25.26 |
| TraesCS4A01G488800.1 | Wheat | cytosol | 47.43 | 24.97 |
| TraesCS3A01G479400.2 | Wheat | extracellular, plasma membrane | 50.86 | 22.56 |
| TraesCS3A01G479100.1 | Wheat | extracellular, plasma membrane | 50.12 | 22.28 |
| TraesCS4A01G493900.1 | Wheat | cytosol, extracellular | 49.39 | 22.17 |
| TraesCS7A01G008500.1 | Wheat | cytosol, vacuole | 49.88 | 22.15 |
| TraesCS7A01G006500.1 | Wheat | cytosol | 49.39 | 22.12 |
| TraesCS4A01G486500.2 | Wheat | cytosol, extracellular | 49.63 | 21.8 |
| TraesCS1A01G004100.1 | Wheat | cytosol | 44.74 | 21.68 |
| TraesCS1A01G004000.1 | Wheat | cytosol | 39.61 | 21.66 |
| TraesCS1A01G009900.2 | Wheat | cytosol | 44.5 | 21.56 |
| TraesCS7A01G111200.1 | Wheat | cytosol | 48.66 | 21.54 |
| TraesCS4A01G489800.1 | Wheat | cytosol | 47.68 | 21.45 |
| TraesCS7A01G110700.1 | Wheat | cytosol | 48.41 | 21.43 |
| TraesCS7A01G551900.1 | Wheat | cytosol | 44.25 | 21.24 |
| TraesCS7A01G004900.1 | Wheat | cytosol | 48.41 | 21.22 |
| TraesCS4A01G474900.1 | Wheat | cytosol, endoplasmic reticulum | 47.68 | 21.15 |
| TraesCS7A01G440200.2 | Wheat | cytosol | 48.9 | 20.62 |
| TraesCS7A01G111000.1 | Wheat | cytosol | 47.68 | 20.5 |
| TraesCS7A01G005600.1 | Wheat | cytosol | 43.28 | 20.34 |
| TraesCS6A01G010100.1 | Wheat | cytosol | 45.23 | 19.85 |
| Os11t0657900-00 | Rice | cytosol | 47.92 | 19.03 |
| TraesCS2A01G575100.1 | Wheat | endoplasmic reticulum, golgi, plastid | 33.74 | 18.83 |
| TraesCS5A01G493600.1 | Wheat | plasma membrane | 42.3 | 18.78 |
| TraesCS6A01G010400.1 | Wheat | cytosol | 44.99 | 17.97 |
| TraesCS6A01G009700.1 | Wheat | cytosol | 45.23 | 17.81 |
| TraesCS6A01G009900.1 | Wheat | cytosol | 43.77 | 17.78 |
| TraesCS2A01G070600.1 | Wheat | endoplasmic reticulum, extracellular | 48.17 | 17.4 |
| TraesCS2A01G070700.2 | Wheat | extracellular | 47.92 | 17.39 |
| TraesCS2A01G585200.1 | Wheat | cytosol | 42.3 | 15.92 |
| TraesCS3A01G081800.1 | Wheat | cytosol | 18.83 | 11.0 |
| TraesCS7A01G440000.1 | Wheat | cytosol | 47.68 | 10.63 |
| TraesCS2A01G568900.1 | Wheat | plasma membrane | 33.25 | 10.45 |
| TraesCS1A01G041100.1 | Wheat | cytosol | 13.94 | 9.24 |
| TraesCS4A01G493500.2 | Wheat | cytosol | 13.69 | 8.78 |
| TraesCS2A01G569200.1 | Wheat | cytosol, plasma membrane, plastid | 33.25 | 8.76 |
| TraesCS4A01G490200.1 | Wheat | cytosol | 13.69 | 8.66 |
| TraesCS3A01G479000.1 | Wheat | cytosol | 10.51 | 7.35 |
| TraesCS2A01G564500.1 | Wheat | extracellular, plasma membrane | 1.71 | 1.34 |
| TraesCS1A01G028800.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 1.22 | 0.92 |
| TraesCS7A01G110900.1 | Wheat | cytosol | 0.73 | 0.7 |
| TraesCS4A01G487900.1 | Wheat | cytosol | 0.24 | 0.22 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G028700.2 | EnsemblPlantsGene:TraesCS1A01G028700 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF25 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52540 | TIGR:cd14798 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:13453280..13455266
Molecular Weight (calculated)
46186.0 Da
IEP (calculated)
8.628
GRAVY (calculated)
-0.361
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIVTGAMGT LIPKLGELLM EEYKLHKRVK KDVEFLRKEL ESMHAALIKV GEVPQDQLDR QVKLWADDVR ELSYNMEDVV GKFLVHVDGD GTQQPHDNSG
101: RFKELKNKMI SLFKKGKNHH RIADAVKEIK EQLQEVAARR DRNKVVVPNP TEPIVIDSCL QALYAEATEL VGIYGKRDQE LMSLLSMEGD DASNKRLKKV
201: SIVGFGGLGK TTLARAVYDK IKGDFDCRAF VPVGQTPDMK KVLRDILIDL GNSHSDLAIL DANQLIKKIH EFLENKRYLV IIDDIWDEKL WEGINFAFSN
301: KNNLGSRLIT TTRNFDVSKS CCLSADDSIY KMKPLCTDES RRLFHKRIFP DASGCPSEFQ QVSEDILKKC GGVPLAIITI ASALASGQEV KPKRMGYSAP
401: VPWLWTNKR
101: RFKELKNKMI SLFKKGKNHH RIADAVKEIK EQLQEVAARR DRNKVVVPNP TEPIVIDSCL QALYAEATEL VGIYGKRDQE LMSLLSMEGD DASNKRLKKV
201: SIVGFGGLGK TTLARAVYDK IKGDFDCRAF VPVGQTPDMK KVLRDILIDL GNSHSDLAIL DANQLIKKIH EFLENKRYLV IIDDIWDEKL WEGINFAFSN
301: KNNLGSRLIT TTRNFDVSKS CCLSADDSIY KMKPLCTDES RRLFHKRIFP DASGCPSEFQ QVSEDILKKC GGVPLAIITI ASALASGQEV KPKRMGYSAP
401: VPWLWTNKR
001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC
Arabidopsis Description
RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.