Factsheet for TraesCS6A01G010100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G009600.1	Wheat	nucleus	26.82	88.97
TraesCS6A01G009500.1	Wheat	cytosol	43.78	88.7
TraesCS6A01G010400.1	Wheat	cytosol	90.77	82.62
TraesCS6D01G013000.1	Wheat	cytosol	86.8	80.02
TraesCS6A01G009700.1	Wheat	cytosol	88.3	79.21
TraesCS6D01G012600.2	Wheat	cytosol	85.62	78.01
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	33.91	64.49
Os11t0588600-01	Rice	cytosol, plasma membrane	16.52	56.41
TraesCS7A01G008400.1	Wheat	cytosol, extracellular	14.7	55.69
TraesCS4A01G488700.1	Wheat	cytosol	29.08	54.53
TraesCS7A01G005000.1	Wheat	cytosol	16.63	54.01
TraesCS4A01G492100.1	Wheat	cytosol	35.3	52.06
TraesCS2A01G026100.1	Wheat	cytosol	25.11	50.11
TraesCS7A01G472100.1	Wheat	cytosol	15.67	49.83
TraesCS2A01G026300.1	Wheat	cytosol	15.77	49.33
Zm00001d004772_P006	Maize	cytosol	52.9	47.91
Zm00001d004771_P001	Maize	cytosol	52.58	47.62
TraesCS4A01G488200.1	Wheat	cytosol	36.59	47.3
TraesCS6A01G009900.1	Wheat	cytosol	50.86	47.07
TraesCS3A01G479300.1	Wheat	cytosol	8.69	46.55
TraesCS1A01G026300.1	Wheat	endoplasmic reticulum	16.52	46.53
TraesCS4A01G488800.1	Wheat	cytosol	37.98	45.56
TraesCS1A01G028700.2	Wheat	cytosol	19.85	45.23
TraesCS4A01G493900.1	Wheat	cytosol, extracellular	43.67	44.68
Os11t0588400-01	Rice	cytosol	43.67	44.68
TraesCS5A01G340600.1	Wheat	cytosol	28.43	44.61
TraesCS3A01G536200.1	Wheat	cytosol, endoplasmic reticulum	23.93	44.33
TraesCS3A01G478900.1	Wheat	cytosol	13.73	44.29
TraesCS1A01G028600.3	Wheat	cytosol	27.79	44.05
TraesCS7A01G111100.1	Wheat	cytosol	24.14	44.03
TraesCS7A01G008500.1	Wheat	cytosol, vacuole	43.45	43.97
TraesCS7A01G006500.1	Wheat	cytosol	43.03	43.92
Os11t0590700-01	Rice	cytosol	40.24	43.91
TraesCS2A01G564600.1	Wheat	cytosol	17.49	43.7
TraesCS4A01G486500.2	Wheat	cytosol, extracellular	43.35	43.39
TraesCS7A01G110800.1	Wheat	cytosol	20.92	43.05
TraesCS7A01G110300.1	Wheat	cytosol	19.85	43.02
TraesCS4A01G474900.1	Wheat	cytosol, endoplasmic reticulum	42.38	42.84
TraesCS4A01G489800.1	Wheat	cytosol	41.52	42.57
TraesCS7A01G005600.1	Wheat	cytosol	39.06	41.84
TraesCS3A01G479200.1	Wheat	extracellular, plasma membrane	34.12	41.09
TraesCS4A01G493500.2	Wheat	cytosol	27.9	40.75
TraesCS2A01G575100.1	Wheat	endoplasmic reticulum, golgi, plastid	31.55	40.11
TraesCS7A01G064000.1	Wheat	cytosol	39.59	39.55
TraesCS3A01G479100.1	Wheat	extracellular, plasma membrane	38.95	39.46
TraesCS3A01G081800.1	Wheat	cytosol	29.51	39.29
TraesCS4A01G490200.1	Wheat	cytosol	27.25	39.26
TraesCS3A01G479400.2	Wheat	extracellular, plasma membrane	38.73	39.15
TraesCS7A01G004900.1	Wheat	cytosol	38.52	38.48
TraesCS2A01G026400.1	Wheat	cytosol	38.84	37.95
TraesCS7A01G111200.1	Wheat	cytosol	37.55	37.88
TraesCS7A01G110700.1	Wheat	cytosol	37.55	37.88
TraesCS1A01G028900.1	Wheat	cytosol	38.95	37.85
TraesCS7A01G440200.2	Wheat	cytosol	39.16	37.63
TraesCS1A01G029100.1	Wheat	cytosol	38.41	37.6
TraesCS1A01G028400.1	Wheat	cytosol, peroxisome, plasma membrane	38.3	37.58
TraesCS7A01G555200.1	Wheat	cytosol	10.84	37.55
TraesCS1A01G026400.2	Wheat	cytosol	38.52	37.47
TraesCS1A01G028500.3	Wheat	cytosol, extracellular, plasma membrane	38.41	37.41
TraesCS7A01G551900.1	Wheat	cytosol	34.12	37.32
TraesCS1A01G004100.1	Wheat	cytosol	33.69	37.2
Os07t0294100-00	Rice	cytosol	27.79	36.63
TraesCS1A01G004000.1	Wheat	cytosol	29.4	36.63
TraesCS1A01G267100.1	Wheat	cytosol, nucleus, plasma membrane	39.48	36.54
TraesCS1A01G009900.2	Wheat	cytosol	32.83	36.26
TraesCS3A01G479000.1	Wheat	cytosol	22.75	36.24
Os11t0590900-00	Rice	cytosol	16.31	36.1
TraesCS7A01G111000.1	Wheat	cytosol	36.27	35.54
TraesCS5A01G493600.1	Wheat	plasma membrane	34.55	34.96
TraesCS2A01G070600.1	Wheat	endoplasmic reticulum, extracellular	41.09	33.83
TraesCS2A01G070700.2	Wheat	extracellular	40.77	33.72
TraesCS1A01G041100.1	Wheat	cytosol	21.67	32.74
TraesCS1A01G028800.1	Wheat	cytosol, golgi, mitochondrion, plastid	18.78	32.29
TraesCS2A01G564500.1	Wheat	extracellular, plasma membrane	17.17	30.53
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	37.98	30.52
TraesCS4A01G487900.1	Wheat	cytosol	14.81	30.46
TraesCS7A01G110900.1	Wheat	cytosol	13.63	29.74
TraesCS2A01G585200.1	Wheat	cytosol	32.73	28.06
TraesCS2A01G568900.1	Wheat	plasma membrane	35.3	25.29
TraesCS2A01G569200.1	Wheat	cytosol, plasma membrane, plastid	36.7	22.02
TraesCS7A01G440000.1	Wheat	cytosol	39.48	20.07

Protein Annotations

EnsemblPlants:TraesCS6A01G010100.1	EnsemblPlantsGene:TraesCS6A01G010100	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF23	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52047	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6A:-:4592743..4597507

Molecular Weight (calculated)

105047.0 Da

IEP (calculated)

6.911

GRAVY (calculated)

-0.153

Length

932 amino acids

Sequence
(BLAST)

001: MQFATGAMSS LLPKLGELLV EEYKLKKSVK KGIEELKAEL ESMQAALIKV SSVPLDQLDP QVKIWANEVR ELSYAIEDSL DSFVTRVEGN EPTKPKIKHL
101: LKKARNEFSK FKARHEIAND IKDIQSQVRK IKERRDSYKI DDVDANPAAT TVDPRLPALY KKLSDLVGID KPINELIKIL SEGVPMPDKN PKIVSIVGFG
201: GLGKTTLAKA LYDKLSTKYE CQAFVPVGQN PNTKKVLRDI LLELDTELSR ATETMAEWQL INQLKKVLAG KRYFIVLDDL WGKQTWETIK YAFVDSHPES
301: RLIITTRIVD VATKAGGIYH MQPLSDDFSK RLFYTRTSGS EGPAEVTTKI LKKCGGVPLA ITTIASLLVG KHSEDWSKVY EAIGFGNEEN DDVHNTRQIL
401: SFSYYDLSPN LKTCLLYLSV FPEDYLIDKI SLIWRWVAEG FIPYREGMES FQLGEIYFNM LVNKSMIRWI DPAYSDDRGG CRVHDMVLDL IRTISNEVNF
501: VTVHDMEHHG TCPGGKSTNK VRRLAVHGSG EHNSGIAMEH VRSYNVVDCR ANGMPLLLSF KVLRVLIIED CVVSEGSSLE HLGKLVQLRY LGLVKTAVKI
601: PEGIGHDLKF LEILDVRGGM ISELPPSVGE LMNLRCLWAD KGTVMKGEIG KLTCLEELEL YSVEKCPNFF TKVGKLTKLR VLKIFFSEIE ESACNALVES
701: LCILHKIHSL TVFCDVEYSV VLNQSLEDLT PCTKLYELGL LGIVIPRVPS WINQLSVPLL SLLYLHVDAV EVQDVQTIGR LPSLLVLLLW SKDEKNISYT
801: FGGNEFHKLR FLWTKKIEIA VGEGALPMLE VLEYSASAER KDAASLVPWR RNSCPLLEDV RCYLDCTNSS YREVKEAKQA LRQASGTRPN AVYLDLDIVK
901: ENWDKKAGKL IDNLEWTLGG TQGFEGYRRR EG

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.