Factsheet for TraesCS6D01G012600.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G013000.1	Wheat	cytosol	89.05	90.11
TraesCS6A01G009500.1	Wheat	cytosol	38.71	86.09
TraesCS6A01G010100.1	Wheat	cytosol	78.01	85.62
TraesCS6A01G010400.1	Wheat	cytosol	84.75	84.67
TraesCS6A01G009700.1	Wheat	cytosol	82.7	81.42
TraesCS6A01G009600.1	Wheat	nucleus	21.99	80.07
TraesCSU01G232900.1	Wheat	nucleus	22.48	79.86
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	67.55	76.95
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	76.34	74.74
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	31.28	65.31
Os11t0588600-01	Rice	cytosol, plasma membrane	14.37	53.85
TraesCS7D01G006300.1	Wheat	cytosol	28.15	51.34
TraesCS1D01G396500.1	Wheat	cytosol	13.98	51.07
TraesCS2D01G028200.2	Wheat	cytosol	14.76	49.67
TraesCS3D01G021900.1	Wheat	cytosol	24.54	49.41
Zm00001d004771_P001	Maize	cytosol	49.46	49.17
Zm00001d004772_P006	Maize	cytosol	49.46	49.17
TraesCS6D01G012700.1	Wheat	plasma membrane	46.63	47.27
TraesCS7D01G005200.1	Wheat	cytosol	14.96	46.79
TraesCS3D01G460000.1	Wheat	cytosol	26.3	45.75
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	11.34	45.31
Os11t0588400-01	Rice	cytosol	39.88	44.79
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	26.98	43.88
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	26.98	43.88
Os11t0590700-01	Rice	cytosol	36.56	43.79
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	11.83	43.37
TraesCS2D01G590900.1	Wheat	cytosol	25.32	43.17
TraesCS7D01G099900.1	Wheat	cytosol	16.03	42.38
TraesCS3D01G082100.1	Wheat	cytosol	38.12	42.3
TraesCS7D01G429600.1	Wheat	cytosol	32.65	42.17
TraesCS1D01G005900.1	Wheat	cytosol	15.84	41.22
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	39.2	40.22
TraesCS2D01G574300.1	Wheat	cytosol	22.78	40.1
TraesCS7D01G099800.1	Wheat	cytosol	19.35	40.0
TraesCS7D01G542300.1	Wheat	cytosol	21.99	39.82
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	35.39	39.39
TraesCS7D01G106200.2	Wheat	cytosol	10.85	39.22
TraesCS7D01G429500.1	Wheat	cytosol	29.81	39.2
TraesCS3D01G474200.1	Wheat	cytosol	19.35	39.13
TraesCS7D01G006800.1	Wheat	cytosol	25.42	39.1
TraesCS2D01G028300.1	Wheat	cytosol	36.07	39.05
TraesCS1D01G006000.1	Wheat	cytosol	28.64	38.86
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	6.45	38.82
TraesCS7D01G008200.1	Wheat	cytosol	24.14	38.71
TraesCS2D01G591300.1	Wheat	cytosol	27.57	38.16
TraesCS1D01G029200.3	Wheat	cytosol	35.48	38.09
TraesCS3D01G473700.1	Wheat	plasma membrane	33.72	37.83
TraesCS3D01G474000.2	Wheat	extracellular, plasma membrane	36.17	37.41
TraesCS3D01G541500.1	Wheat	cytosol	5.28	37.24
TraesCS2D01G574500.1	Wheat	cytosol	12.51	37.21
TraesCS1D01G028200.1	Wheat	cytosol	34.6	36.95
TraesCS7D01G106100.2	Wheat	cytosol	33.33	36.83
TraesCS1D01G028600.1	Wheat	plasma membrane	34.51	36.73
TraesCS1D01G006800.1	Wheat	cytosol	34.6	36.65
Os07t0294100-00	Rice	cytosol	25.32	36.63
TraesCS1D01G267200.1	Wheat	cytosol	30.99	36.56
TraesCS2D01G591200.1	Wheat	cytosol	19.45	36.38
TraesCS5D01G344600.1	Wheat	cytosol	34.31	36.34
TraesCS4D01G315100.1	Wheat	plasma membrane	32.06	36.32
TraesCS1D01G032200.2	Wheat	cytosol	33.92	36.15
TraesCS1D01G006300.1	Wheat	cytosol	22.19	36.03
TraesCS2D01G503500.1	Wheat	cytosol	19.26	36.01
Os11t0590900-00	Rice	cytosol	14.66	35.63
TraesCS1D01G029100.2	Wheat	cytosol	34.9	35.63
TraesCS7D01G538200.2	Wheat	cytosol	33.82	35.56
TraesCS2D01G003200.1	Wheat	cytosol	34.21	35.07
TraesCS6D01G100300.1	Wheat	cytosol	31.87	34.94
TraesCS2D01G590700.1	Wheat	cytosol	28.15	34.66
TraesCS2D01G590800.2	Wheat	extracellular	29.23	34.45
TraesCS2D01G069600.2	Wheat	extracellular	36.66	34.37
TraesCS1D01G005300.1	Wheat	cytosol	30.01	34.3
TraesCS7D01G106300.1	Wheat	cytosol	20.23	34.21
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	33.04	33.56
TraesCS2D01G575000.1	Wheat	cytosol	26.3	33.5
TraesCS2D01G574400.1	Wheat	cytosol	31.38	33.26
TraesCS7D01G105600.1	Wheat	cytosol	18.67	32.82
TraesCS5D01G021700.1	Wheat	cytosol	34.31	32.62
TraesCS2D01G028400.1	Wheat	plastid	29.72	31.93
TraesCS2D01G057600.1	Wheat	cytosol	32.84	31.05
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	35.19	31.03
TraesCS1D01G028700.1	Wheat	cytosol	16.52	30.45
TraesCS2D01G601200.1	Wheat	cytosol	30.4	28.72
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	26.98	24.51
TraesCS2D01G503400.1	Wheat	cytosol	8.8	15.54

Protein Annotations

EnsemblPlants:TraesCS6D01G012600.2	EnsemblPlantsGene:TraesCS6D01G012600	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF23	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52047	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:+:5058981..5066918

Molecular Weight (calculated)

115211.0 Da

IEP (calculated)

6.323

GRAVY (calculated)

-0.213

Length

1023 amino acids

Sequence
(BLAST)

0001: MEFATGAMSS LLPKLGELLM EEYKLKESVK NGIGELKAEL ESMQAALVKV SSVPLDQLDP QVKIWANEVR ELSYAVEDSL DSFVRRVEGV EPTKPKIKHL
0101: LKAARNEFTK FKARHEIASD VKDIESQVRK IKERYDRYKI DDVVANLATT PVDPRLPALY KKLSDLVGID EPINELIKIL SEGIHMPDKN PKIVSVVGFG
0201: GLGKTTLAKA LYDKLSKTYQ CQAFVPVGQN PNTQKVLRDI LLELDTGLSR ATETMVEWQL INQLQKILAG KRYFIVIDDI WDTQTWDVIK CAFVDSHPES
0301: RLIITTRIVD VATKAGGIYH MQPLSDDYSK ILFYTRTSGS EGPAEVTTKI LKKCGGVPLA ITTIASLLVG KHSEDWSKVY DAIGFGHADN GDVHNTRKIL
0401: SFSYYDLSSN LKTCLLYLSV FPEDCLIDKI SLIWRWVAEG FIPYREGMES FELGEIYFNT LVNKSMIRWI DPEDNDGRGG CRVHDMVLDL IRTVSNEVNF
0501: VTVHDMEHHD TCPGGKSTNK VHRLAVHGKS GEHNYSIAME HVRSFNVVEC SGNSIPLLLS FKVLRVLVIE DCVFSEGSNL EHLGKLLQLR YLGLVKTAVK
0601: IPEGIGHDLK FLEILDVRGG LISELPPSVG ELLNLRCLWA DNGTVMKGEI GKLTCLEELQ LYSVQKCPNF CTEVRKLTKL RVLKIYFGEM EESAGKAMME
0701: SLCNLHKIHT LAVVDDGAQT KYSVDPNHSL EDLAPCTKLY ELFLPIIVIP RVPSWINQLS VPLLSRLLLH VDAVEVRDVQ TIGRLPSLLE LGLWSKDERN
0801: VSYTFGSNEF HKLRGLFTKK IEIAVGEGAL PMLEELVYSA SAERKDAASL VPWRRNSCPL LKFVGCFLDC TNSSYREVKE AKQALWQASG TRPNAVYLDL
0901: DIEEENYDEE AGRFIDNLVE VLGGLERPED VGRAAAHQEE RTRRMIRSLE RRLRDAAEPR VGRYGQQEIR GLVAKFKSWL HDHAGTDQDE DGGHLEGFYG
1001: LTVATWKMSA YFVHGCEENH KRK

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.