Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G009500.1 | Wheat | cytosol | 43.79 | 98.91 |
| TraesCS6A01G009600.1 | Wheat | nucleus | 26.37 | 97.51 |
| TraesCS6A01G010400.1 | Wheat | cytosol | 88.45 | 89.75 |
| TraesCS6A01G010100.1 | Wheat | cytosol | 79.21 | 88.3 |
| TraesCS6D01G013000.1 | Wheat | cytosol | 81.42 | 83.68 |
| TraesCS6D01G012600.2 | Wheat | cytosol | 81.42 | 82.7 |
| TraesCS2B01G180600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 31.18 | 66.12 |
| Os11t0588600-01 | Rice | cytosol, plasma membrane | 15.01 | 57.14 |
| TraesCS7A01G005000.1 | Wheat | cytosol | 15.3 | 55.4 |
| TraesCS7A01G008400.1 | Wheat | cytosol, extracellular | 12.99 | 54.88 |
| TraesCS4A01G488700.1 | Wheat | cytosol | 26.18 | 54.73 |
| TraesCS4A01G492100.1 | Wheat | cytosol | 31.95 | 52.53 |
| TraesCS7A01G472100.1 | Wheat | cytosol | 14.24 | 50.51 |
| Zm00001d004772_P006 | Maize | cytosol | 49.47 | 49.95 |
| TraesCS2A01G026100.1 | Wheat | cytosol | 22.43 | 49.89 |
| Zm00001d004771_P001 | Maize | cytosol | 49.18 | 49.66 |
| TraesCS6A01G009900.1 | Wheat | cytosol | 48.03 | 49.55 |
| TraesCS2A01G026300.1 | Wheat | cytosol | 14.15 | 49.33 |
| TraesCS4A01G488200.1 | Wheat | cytosol | 33.98 | 48.96 |
| TraesCS1A01G026300.1 | Wheat | endoplasmic reticulum | 15.01 | 47.13 |
| TraesCS3A01G478900.1 | Wheat | cytosol | 12.9 | 46.37 |
| Os11t0588400-01 | Rice | cytosol | 40.33 | 45.99 |
| TraesCS3A01G479300.1 | Wheat | cytosol | 7.7 | 45.98 |
| TraesCS3A01G536200.1 | Wheat | cytosol, endoplasmic reticulum | 22.14 | 45.73 |
| TraesCS4A01G488800.1 | Wheat | cytosol | 34.07 | 45.56 |
| TraesCS1A01G028700.2 | Wheat | cytosol | 17.81 | 45.23 |
| TraesCS5A01G340600.1 | Wheat | cytosol | 25.79 | 45.12 |
| TraesCS7A01G110800.1 | Wheat | cytosol | 19.63 | 45.03 |
| TraesCS7A01G111100.1 | Wheat | cytosol | 22.14 | 45.01 |
| TraesCS4A01G493900.1 | Wheat | cytosol, extracellular | 39.46 | 45.01 |
| TraesCS7A01G006500.1 | Wheat | cytosol | 38.88 | 44.25 |
| TraesCS7A01G008500.1 | Wheat | cytosol, vacuole | 38.98 | 43.97 |
| TraesCS4A01G486500.2 | Wheat | cytosol, extracellular | 39.36 | 43.93 |
| Os11t0590700-01 | Rice | cytosol | 36.09 | 43.91 |
| TraesCS7A01G110300.1 | Wheat | cytosol | 18.09 | 43.72 |
| TraesCS4A01G489800.1 | Wheat | cytosol | 38.21 | 43.67 |
| TraesCS1A01G028600.3 | Wheat | cytosol | 24.64 | 43.54 |
| TraesCS4A01G474900.1 | Wheat | cytosol, endoplasmic reticulum | 38.31 | 43.17 |
| TraesCS7A01G005600.1 | Wheat | cytosol | 35.8 | 42.76 |
| TraesCS2A01G564600.1 | Wheat | cytosol | 15.11 | 42.09 |
| TraesCS3A01G479200.1 | Wheat | extracellular, plasma membrane | 31.28 | 41.99 |
| TraesCS4A01G493500.2 | Wheat | cytosol | 25.31 | 41.22 |
| TraesCS3A01G081800.1 | Wheat | cytosol | 27.24 | 40.43 |
| TraesCS3A01G479100.1 | Wheat | extracellular, plasma membrane | 35.32 | 39.89 |
| TraesCS4A01G490200.1 | Wheat | cytosol | 24.83 | 39.88 |
| TraesCS2A01G575100.1 | Wheat | endoplasmic reticulum, golgi, plastid | 28.1 | 39.84 |
| TraesCS7A01G064000.1 | Wheat | cytosol | 35.71 | 39.76 |
| TraesCS3A01G479400.2 | Wheat | extracellular, plasma membrane | 35.23 | 39.7 |
| TraesCS7A01G004900.1 | Wheat | cytosol | 34.65 | 38.59 |
| TraesCS7A01G110700.1 | Wheat | cytosol | 34.26 | 38.53 |
| TraesCS7A01G111200.1 | Wheat | cytosol | 33.98 | 38.2 |
| Os07t0294100-00 | Rice | cytosol | 25.99 | 38.19 |
| TraesCS7A01G440200.2 | Wheat | cytosol | 35.42 | 37.94 |
| TraesCS1A01G028400.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.65 | 37.89 |
| TraesCS2A01G026400.1 | Wheat | cytosol | 34.74 | 37.84 |
| TraesCS1A01G004100.1 | Wheat | cytosol | 30.7 | 37.8 |
| TraesCS7A01G551900.1 | Wheat | cytosol | 30.99 | 37.79 |
| TraesCS1A01G028900.1 | Wheat | cytosol | 34.55 | 37.43 |
| TraesCS1A01G004000.1 | Wheat | cytosol | 26.95 | 37.43 |
| TraesCS1A01G026400.2 | Wheat | cytosol | 34.46 | 37.37 |
| TraesCS1A01G028500.3 | Wheat | cytosol, extracellular, plasma membrane | 34.36 | 37.3 |
| TraesCS1A01G029100.1 | Wheat | cytosol | 34.17 | 37.29 |
| TraesCS7A01G555200.1 | Wheat | cytosol | 9.62 | 37.17 |
| TraesCS1A01G267100.1 | Wheat | cytosol, nucleus, plasma membrane | 35.51 | 36.64 |
| TraesCS7A01G111000.1 | Wheat | cytosol | 33.4 | 36.49 |
| TraesCS3A01G479000.1 | Wheat | cytosol | 20.31 | 36.07 |
| TraesCS1A01G009900.2 | Wheat | cytosol | 29.26 | 36.02 |
| TraesCS5A01G493600.1 | Wheat | plasma membrane | 31.76 | 35.83 |
| Os11t0590900-00 | Rice | cytosol | 14.44 | 35.63 |
| TraesCS2A01G070600.1 | Wheat | endoplasmic reticulum, extracellular | 38.59 | 35.42 |
| TraesCS2A01G070700.2 | Wheat | extracellular | 37.92 | 34.96 |
| TraesCS1A01G028800.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 16.75 | 32.1 |
| TraesCS1A01G041100.1 | Wheat | cytosol | 19.06 | 32.09 |
| KXG22895 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 34.94 | 31.29 |
| TraesCS2A01G564500.1 | Wheat | extracellular, plasma membrane | 15.59 | 30.92 |
| TraesCS7A01G110900.1 | Wheat | cytosol | 12.42 | 30.21 |
| TraesCS4A01G487900.1 | Wheat | cytosol | 13.09 | 30.02 |
| TraesCS2A01G585200.1 | Wheat | cytosol | 29.84 | 28.52 |
| TraesCS2A01G568900.1 | Wheat | plasma membrane | 32.63 | 26.06 |
| TraesCS2A01G569200.1 | Wheat | cytosol, plasma membrane, plastid | 34.17 | 22.86 |
| TraesCS7A01G440000.1 | Wheat | cytosol | 36.48 | 20.67 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G009700.1 | EnsemblPlantsGene:TraesCS6A01G009700 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF23 | PFAM:PF00931 | PRINTS:PR00364 |
| SEG:seg | SUPFAM:SSF52047 | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr6A:+:4202019..4209642
Molecular Weight (calculated)
117571.0 Da
IEP (calculated)
5.431
GRAVY (calculated)
-0.296
Length
1039 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQFATGAMSS LLPKLGELLV EEYKLKKSVR KGIEELKAEL ESMQAALIKV SSVPLDQLDP QVKIWANEVR ELSYAIEDSL DSFVTRVEGN EPTKPKIKHL
0101: LKKARNEFSK FKARHEIAND IKDIQSQVRK IKERRDSYKI DDVDANPAAT TVDPRLPALY KKLSDLVGID KPINELIKIL SEGVPMPDKN PKIVSIVGFG
0201: GLGKTTLAKA LYDKLSTKYQ RVTTYQCHGF VPVGQNPKAK KVLLDIVCEL DKELYKAATT MDERQLINEL QTFLAGKRYF IVIDDIWDTQ IWETIKCAFM
0301: DSHPESRLII TTRIVDVATK AGGIYHMQPL SDDYSKILFY TRTSGSEGPA EVTTKILKKC GGVPLAITTI ASLLVGKHTE DWSKVYDAIG FGHADNGDVH
0401: NTRKILSFSY YDLSSNLKTC LLYLSVFPED YLINKISLIW RWVAEGFIPY GEGMEPFELG EIYFNKLVNK SMIRWIDPED NDGRGGCRVH DMVLDLIRTI
0501: SNDVNFVTIH DMEQHGTCSR GERTNWVRRL AVHGSGEHNS GIEMEHVRSY NVVDCRANSM PLLLSFKVLR VLVIEDCVLS EGSSLEHLGK LVQLRYLGLV
0601: KTAVKIPEGI GHDLKFLEIL DVRGGLISEL PPSVGELMNL RCLWADEGTV MKGEIGKLTC LEELELYSVH KCPNFFTEVG KLTELRVLHI HFAEIEESAG
0701: KALMESLRNL HKIHILRVWD DDVEAEYSVV LNDSLEDLAP CTKLYELILP IIVIPRVPSW INHLSVPLLS RLGLHVDAVE VQDVQTIGRL PSLLVLLLWS
0801: KDEKNISYTF GSNEFHKLRV LWTKKIEIAV GEGALPMLEV LEYRASAERK DAASLVPWRR NSCPLLKEVT CYLDCTNCSY RKVEEAEEAL RQASGTRPNA
0901: VYLDLEIVKE NYDKKAGKFI DNLEWILRGL DRPEDVGRPA AYQEERTRLM IRSLERRLRD DAEPRVGWHG EQEMRGLVTK FKIWLHDHAG TNQDEAGKSD
1001: ATDSEDGDDE DYYYGDQAEA DDGEATCSGD QQEEEGAQR
0101: LKKARNEFSK FKARHEIAND IKDIQSQVRK IKERRDSYKI DDVDANPAAT TVDPRLPALY KKLSDLVGID KPINELIKIL SEGVPMPDKN PKIVSIVGFG
0201: GLGKTTLAKA LYDKLSTKYQ RVTTYQCHGF VPVGQNPKAK KVLLDIVCEL DKELYKAATT MDERQLINEL QTFLAGKRYF IVIDDIWDTQ IWETIKCAFM
0301: DSHPESRLII TTRIVDVATK AGGIYHMQPL SDDYSKILFY TRTSGSEGPA EVTTKILKKC GGVPLAITTI ASLLVGKHTE DWSKVYDAIG FGHADNGDVH
0401: NTRKILSFSY YDLSSNLKTC LLYLSVFPED YLINKISLIW RWVAEGFIPY GEGMEPFELG EIYFNKLVNK SMIRWIDPED NDGRGGCRVH DMVLDLIRTI
0501: SNDVNFVTIH DMEQHGTCSR GERTNWVRRL AVHGSGEHNS GIEMEHVRSY NVVDCRANSM PLLLSFKVLR VLVIEDCVLS EGSSLEHLGK LVQLRYLGLV
0601: KTAVKIPEGI GHDLKFLEIL DVRGGLISEL PPSVGELMNL RCLWADEGTV MKGEIGKLTC LEELELYSVH KCPNFFTEVG KLTELRVLHI HFAEIEESAG
0701: KALMESLRNL HKIHILRVWD DDVEAEYSVV LNDSLEDLAP CTKLYELILP IIVIPRVPSW INHLSVPLLS RLGLHVDAVE VQDVQTIGRL PSLLVLLLWS
0801: KDEKNISYTF GSNEFHKLRV LWTKKIEIAV GEGALPMLEV LEYRASAERK DAASLVPWRR NSCPLLKEVT CYLDCTNCSY RKVEEAEEAL RQASGTRPNA
0901: VYLDLEIVKE NYDKKAGKFI DNLEWILRGL DRPEDVGRPA AYQEERTRLM IRSLERRLRD DAEPRVGWHG EQEMRGLVTK FKIWLHDHAG TNQDEAGKSD
1001: ATDSEDGDDE DYYYGDQAEA DDGEATCSGD QQEEEGAQR
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.