Factsheet for TraesCS1A01G267100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G278000.1	Wheat	cytosol	21.95	93.25
TraesCS1B01G277900.1	Wheat	cytosol	28.1	92.79
TraesCS1D01G267200.1	Wheat	cytosol	77.95	90.54
TraesCS2A01G026100.1	Wheat	cytosol	35.15	75.8
TraesCS2A01G026300.1	Wheat	cytosol	21.45	72.48
TraesCS7A01G064000.1	Wheat	cytosol	62.56	67.52
TraesCS2A01G026400.1	Wheat	cytosol	62.07	65.51
TraesCS5A01G340600.1	Wheat	cytosol	37.44	63.47
TraesCS1A01G028700.2	Wheat	cytosol	25.42	62.59
TraesCS7A01G472100.1	Wheat	cytosol	17.97	61.77
TraesCS1A01G028600.3	Wheat	cytosol	35.75	61.22
TraesCS1A01G026300.1	Wheat	endoplasmic reticulum	20.06	61.03
TraesCS7A01G008400.1	Wheat	cytosol, extracellular	14.4	58.94
TraesCS7A01G005000.1	Wheat	cytosol	15.99	56.1
TraesCS3A01G536200.1	Wheat	cytosol, endoplasmic reticulum	27.9	55.86
TraesCS1A01G028900.1	Wheat	cytosol	52.53	55.16
TraesCS1A01G028500.3	Wheat	cytosol, extracellular, plasma membrane	52.33	55.07
TraesCS1A01G029100.1	Wheat	cytosol	52.04	55.04
TraesCS1A01G026400.2	Wheat	cytosol	52.23	54.91
TraesCS4A01G488700.1	Wheat	cytosol	26.71	54.12
TraesCS1A01G028400.1	Wheat	cytosol, peroxisome, plasma membrane	50.65	53.68
TraesCS4A01G492100.1	Wheat	cytosol	33.56	53.48
TraesCS7A01G111100.1	Wheat	cytosol	26.91	53.03
TraesCS7A01G110800.1	Wheat	cytosol	23.14	51.43
TraesCS6A01G009600.1	Wheat	nucleus	14.2	50.89
TraesCS1A01G041100.1	Wheat	cytosol	31.08	50.73
TraesCS6A01G009500.1	Wheat	cytosol	23.14	50.65
TraesCS3A01G478900.1	Wheat	cytosol	14.3	49.83
TraesCS7A01G110300.1	Wheat	cytosol	21.25	49.77
TraesCS4A01G488200.1	Wheat	cytosol	35.25	49.24
TraesCS3A01G479200.1	Wheat	extracellular, plasma membrane	37.54	48.84
TraesCS1A01G028800.1	Wheat	cytosol, golgi, mitochondrion, plastid	26.12	48.52
TraesCS3A01G479300.1	Wheat	cytosol	8.34	48.28
TraesCS2A01G564600.1	Wheat	cytosol	17.78	47.99
TraesCS3A01G479100.1	Wheat	extracellular, plasma membrane	43.5	47.61
TraesCS3A01G479400.2	Wheat	extracellular, plasma membrane	43.1	47.07
TraesCS1A01G004000.1	Wheat	cytosol	34.66	46.66
TraesCS7A01G004900.1	Wheat	cytosol	42.6	45.98
TraesCS4A01G488800.1	Wheat	cytosol	35.15	45.56
TraesCS7A01G110700.1	Wheat	cytosol	41.31	45.02
TraesCS3A01G479000.1	Wheat	cytosol	26.12	44.96
TraesCS4A01G493900.1	Wheat	cytosol, extracellular	40.32	44.57
TraesCS7A01G111200.1	Wheat	cytosol	40.81	44.48
TraesCS7A01G111000.1	Wheat	cytosol	41.41	43.85
TraesCS7A01G008500.1	Wheat	cytosol, vacuole	40.02	43.76
TraesCS7A01G555200.1	Wheat	cytosol	11.62	43.49
TraesCS4A01G486500.2	Wheat	cytosol, extracellular	40.02	43.29
TraesCS7A01G006500.1	Wheat	cytosol	38.73	42.72
TraesCS7A01G005600.1	Wheat	cytosol	36.44	42.18
TraesCS4A01G489800.1	Wheat	cytosol	37.64	41.69
TraesCS4A01G474900.1	Wheat	cytosol, endoplasmic reticulum	37.84	41.32
TraesCS7A01G551900.1	Wheat	cytosol	34.76	41.08
TraesCS5A01G493600.1	Wheat	plasma membrane	36.64	40.07
TraesCS6A01G010100.1	Wheat	cytosol	36.54	39.48
TraesCS7A01G440200.2	Wheat	cytosol	37.93	39.38
TraesCS1A01G004100.1	Wheat	cytosol	32.87	39.22
TraesCS3A01G081800.1	Wheat	cytosol	27.11	39.0
TraesCS1A01G009900.2	Wheat	cytosol	32.57	38.86
Os11t0657900-00	Rice	cytosol	39.42	38.54
TraesCS4A01G493500.2	Wheat	cytosol	24.13	38.09
TraesCS4A01G490200.1	Wheat	cytosol	24.23	37.71
TraesCS6A01G010400.1	Wheat	cytosol	36.64	36.04
TraesCS2A01G575100.1	Wheat	endoplasmic reticulum, golgi, plastid	26.22	36.02
TraesCS6A01G009900.1	Wheat	cytosol	35.95	35.95
TraesCS6A01G009700.1	Wheat	cytosol	36.64	35.51
TraesCS2A01G070600.1	Wheat	endoplasmic reticulum, extracellular	39.92	35.51
TraesCS2A01G564500.1	Wheat	extracellular, plasma membrane	18.47	35.5
TraesCS2A01G070700.2	Wheat	extracellular	39.13	34.96
TraesCS7A01G110900.1	Wheat	cytosol	14.6	34.43
TraesCS2A01G585200.1	Wheat	cytosol	35.95	33.3
TraesCS4A01G487900.1	Wheat	cytosol	13.6	30.24
TraesCS2A01G568900.1	Wheat	plasma membrane	29.39	22.75
TraesCS7A01G440000.1	Wheat	cytosol	38.33	21.05
TraesCS2A01G569200.1	Wheat	cytosol, plasma membrane, plastid	30.29	19.64

Protein Annotations

EnsemblPlants:TraesCS1A01G267100.1	EnsemblPlantsGene:TraesCS1A01G267100	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr1A:+:462390320..462395403

Molecular Weight (calculated)

114141.0 Da

IEP (calculated)

7.197

GRAVY (calculated)

-0.151

Length

1007 amino acids

Sequence
(BLAST)

0001: MSAGVACFKG EQSCDKQLYV RLYSYSSSHD TIFSFELARV LQNASLQHQT HTNQTTIQLA QREQLQMNLA TGAMGSLLPK LLELLKEEYK LKKKVREGVE
0101: SLEKEMKSMY TALRKVGEVP RDQLDEQVKF WADEVRELSF NMEDVVDKFL VRVEDGSEPA ANSNKIKRLT KKMAGLFIKG KTHHEIANAI KDINKQVQEV
0201: ASRRVRYNVD NLVAMPAAVA PIDPRLRALY TEVTELVGIA GKRDQELMKL LSEGDNESKK KLKTVSVVGF GGLGKTTLVK TVYDKIKGEF DCRAFVSVGR
0301: NASAKKILMD ILLALDMYES HFTILGETQL IDKLRERLEN KRYLIVIDDI WDEKLWTIIN WAFSKNNNFG SRLITTTRIV NVSKFCCSST NDSVYQMEPL
0401: SDDDSKRLFY KRIFSQESGC PRELEEVSTC ILKKCGGVPL AIITIASLLA SDQHPKPEDE WHVLLESIGR GLTKDHGVEE MMRILSISYY DLPSYLRTCL
0501: LYLSMFPEDR EIMKDQLIWM WIAESFVQCE KAKTSLFEIG ETYFNELVNR SLIQPVYNYR GFVYACRVHD SVLDLICSLS REESFVTILN GTDDGISSQR
0601: NVRKLSLQNT IKEHQTMPLI SKSILQVRSI ATFKSAIGLL PPLSSFVVLR VLDLTGCNVG DHSHLNLQDL GTLFHLRYLG LADIGISEVP EVGKLQFLQV
0701: LDLSGNYDIR ELPSSVTRLR RLMCLLTEPL WNLPDGLGKL TSMEVLGEIC GDSLCTVKAL GNMKALRKLQ IKFNDLSMEL EEAFVESLEE LSNIQSLEID
0801: ASGASMDLLG ERWVPPRSLR EFIADRHGIF SMLPAWIRRN PAHLSQLHEL HIWVEEVRQK DLGFLGKLSA LHSLTLRTTR QRQLFFGADG FRCLTTIVLV
0901: CRSPGRIMFR PGALPRAETV KFEIRLRVAK EEAASSGGDW LDLGMEYLVS LRKVHVRFYT SGVMVGEVKQ ARASLENTLH AHPNRPVFGV FFIPDIVHGT
1001: SDDDTFV

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.