Factsheet for TraesCSU01G232900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G009600.1	Wheat	nucleus	97.22	99.64
Os11t0588600-01	Rice	cytosol, plasma membrane	54.17	57.14
TraesCSU01G234400.1	Wheat	cytosol	42.01	51.71
TraesCSU01G214600.1	Wheat	cytosol	42.01	51.71
TraesCSU01G213800.1	Wheat	cytosol	42.01	51.71
TraesCSU01G001700.1	Wheat	cytosol	50.35	49.32
TraesCSU01G243100.1	Wheat	cytosol	47.92	47.92
TraesCSU01G086000.1	Wheat	cytosol	64.24	44.47
TraesCS2B01G180600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	62.15	36.53
TraesCS6D01G013000.1	Wheat	cytosol	79.86	22.75
TraesCS6D01G012600.2	Wheat	cytosol	79.86	22.48
TraesCSU01G098900.1	Wheat	cytosol	63.19	18.7
Os07t0294100-00	Rice	cytosol	43.75	17.82
Os11t0590700-01	Rice	cytosol	47.92	16.16
Os11t0588400-01	Rice	cytosol	51.04	16.14
Zm00001d004771_P001	Maize	cytosol	57.64	16.13
Zm00001d004772_P006	Maize	cytosol	57.64	16.13
TraesCSU01G001800.1	Wheat	cytosol	50.35	15.33
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	42.01	10.43
Os11t0590900-00	Rice	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCSU01G232900.1	EnsemblPlantsGene:TraesCSU01G232900	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR44382
PANTHER:PTHR44382:SF2	PFAM:PF00931	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chrUn:+:345034911..345035777

Molecular Weight (calculated)

32394.4 Da

IEP (calculated)

9.676

GRAVY (calculated)

-0.383

Length

288 amino acids

Sequence
(BLAST)

001: MQFATGAMSS LLPKLGELLV EEYKLKKSVR KGIEELKAEL ESMQAALIKV SSVPLDQLDP QVKIWANEVR ELSYAIEDSL DSFVTRVEGN EPTKPKIKHL
101: LKKARNEFSK FKARHEIAND IKDIQSQVRK IKERRDSYKI DDVDANPAAT TVDPRLPALY KKLSDLVGID KPINELIKIL SEGVPMPDKN PKIVSIVGFG
201: GLGKTTLAKA LYDKLSTKYQ RVTTYQCHGF VPVGQNPKAK KVLLDIVCEL DKELYKAATT MDERQLINEL QTFLAGKRYT LTSLYASQ

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.