Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G213800.1 | Wheat | cytosol | 50.68 | 63.68 |
| TraesCSU01G214600.1 | Wheat | cytosol | 50.68 | 63.68 |
| TraesCSU01G234400.1 | Wheat | cytosol | 50.68 | 63.68 |
| TraesCSU01G243100.1 | Wheat | cytosol | 52.72 | 53.82 |
| TraesCSU01G232900.1 | Wheat | nucleus | 49.32 | 50.35 |
| HORVU2Hr1G004070.4 | Barley | cytosol | 69.39 | 35.54 |
| TraesCSU01G086000.1 | Wheat | cytosol | 45.92 | 32.45 |
| TraesCS2B01G039100.1 | Wheat | cytosol | 86.05 | 26.91 |
| TraesCSU01G001800.1 | Wheat | cytosol | 78.91 | 24.52 |
| Os11t0657900-00 | Rice | cytosol | 47.96 | 13.69 |
| TraesCSU01G098900.1 | Wheat | cytosol | 41.5 | 12.54 |
Protein Annotations
| EnsemblPlants:TraesCSU01G001700.1 | EnsemblPlantsGene:TraesCSU01G001700 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:NB-ARC | InterPro:P-loop_NTPase | InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR44382 |
| PANTHER:PTHR44382:SF1 | PFAM:PF00931 | SEG:seg | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 |
Description
No Description!
Coordinates
chrUn:-:1993728..1996876
Molecular Weight (calculated)
33089.8 Da
IEP (calculated)
10.111
GRAVY (calculated)
-0.328
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMSMATGAM GSLLPKLVEL LKEEYKLKES VKEGVRSLEE EMKSMQAALR KVGEVPRDQL DEQVKIWAAE VRELSFKMED IVDKFLVRVD DGSEPAANPK
101: KLKRLTKMMA GLFTKGKTRH EIADAIKSIK KQVQDVADRR ARYNVDNFVA RPAAVTPIDP RLAALYTKVT ELVGIAGKRD QELMRLLFEE DNLPKKELKI
201: VSVVGFGGLG KTTLVKMVYD KIKGDFDCGA FVPVGRNADV KKILLLDLDL DESQLTRLDE RQLINKLQKG LEKKRESSIG TRRFPPLGVL FKTV
101: KLKRLTKMMA GLFTKGKTRH EIADAIKSIK KQVQDVADRR ARYNVDNFVA RPAAVTPIDP RLAALYTKVT ELVGIAGKRD QELMRLLFEE DNLPKKELKI
201: VSVVGFGGLG KTTLVKMVYD KIKGDFDCGA FVPVGRNADV KKILLLDLDL DESQLTRLDE RQLINKLQKG LEKKRESSIG TRRFPPLGVL FKTV
001: MAEGFVSFGL EKLWDLLSRE SERLQGIDEQ LDGLKRQLRS LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKKHVRRLAR
101: FLTDRHKVAS DIEGITKRIS DVIGEMQSFG IQQIIDGVRS LSLQERQRVQ REIRQTYPDS SESDLVGVEQ SVEELVGHLV ENDIYQVVSI AGMGGIGKTT
201: LARQVFHHDL VRRHFDGFAW VCVSQQFTLK HVWQRILQEL QPHDGNILQM DESALQPKLF QLLETGRYLL VLDDVWKKED WDRIKAVFPR KRGWKMLLTS
301: RNEGVGIHAD PTCLTFRASI LNPEESWKLC ERIVFPRRDE TEVRLDEEME AMGKEMVTHC GGLPLAVKAL GGLLANKHTV PEWKRVSDNI GSQIVGGSCL
401: DDNSLNSVNR ILSLSYEDLP THLKHRFLYL AHFPEDSKIY TQDLFNYWAA EGIYDGSTIQ DSGEYYLEEL VRRNLVIADN RYLSLEFNFC QMHDMMREVC
501: LSKAKEENFL QIIKDPTSTS TINAQSPSRS RRFSIHSGKA FHILGHRNNP KVRSLIVSRF EEDFWIRSAS VFHNLTLLRV LDLSRVKFEG GKLPSSIGGL
601: IHLRYLSLYG AVVSHLPSTM RNLKLLLFLN LRVDNKEPIH VPNVLKEMLE LRYLSLPQEM DDKTKLELGD LVNLEYLWYF STQHSSVTDL LRMTKLRNLG
701: VSLSERCNFE TLSSSLRELR NLEMLNVLFS PEIVMVDHMG EFVLDHFIHL KQLGLAVRMS KIPDQHQFPP HLAHIHLVHC VMKEDPMPIL EKLLHLKSVA
801: LSYGAFIGRR VVCSKGGFPQ LCALGISGES ELEEWIVEEG SMPCLRTLTI HDCEKLKELP DGLKYITSLK ELKIREMKRE WKEKLVPGGE DYYKVQHIPD
901: VQFINCDL
101: FLTDRHKVAS DIEGITKRIS DVIGEMQSFG IQQIIDGVRS LSLQERQRVQ REIRQTYPDS SESDLVGVEQ SVEELVGHLV ENDIYQVVSI AGMGGIGKTT
201: LARQVFHHDL VRRHFDGFAW VCVSQQFTLK HVWQRILQEL QPHDGNILQM DESALQPKLF QLLETGRYLL VLDDVWKKED WDRIKAVFPR KRGWKMLLTS
301: RNEGVGIHAD PTCLTFRASI LNPEESWKLC ERIVFPRRDE TEVRLDEEME AMGKEMVTHC GGLPLAVKAL GGLLANKHTV PEWKRVSDNI GSQIVGGSCL
401: DDNSLNSVNR ILSLSYEDLP THLKHRFLYL AHFPEDSKIY TQDLFNYWAA EGIYDGSTIQ DSGEYYLEEL VRRNLVIADN RYLSLEFNFC QMHDMMREVC
501: LSKAKEENFL QIIKDPTSTS TINAQSPSRS RRFSIHSGKA FHILGHRNNP KVRSLIVSRF EEDFWIRSAS VFHNLTLLRV LDLSRVKFEG GKLPSSIGGL
601: IHLRYLSLYG AVVSHLPSTM RNLKLLLFLN LRVDNKEPIH VPNVLKEMLE LRYLSLPQEM DDKTKLELGD LVNLEYLWYF STQHSSVTDL LRMTKLRNLG
701: VSLSERCNFE TLSSSLRELR NLEMLNVLFS PEIVMVDHMG EFVLDHFIHL KQLGLAVRMS KIPDQHQFPP HLAHIHLVHC VMKEDPMPIL EKLLHLKSVA
801: LSYGAFIGRR VVCSKGGFPQ LCALGISGES ELEEWIVEEG SMPCLRTLTI HDCEKLKELP DGLKYITSLK ELKIREMKRE WKEKLVPGGE DYYKVQHIPD
901: VQFINCDL
Arabidopsis Description
RPP8L4Probable disease resistance RPP8-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.