Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G232900.1 | Wheat | nucleus | 18.7 | 63.19 |
| TraesCS2B01G180600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 30.01 | 59.59 |
| TraesCSU01G086000.1 | Wheat | cytosol | 24.05 | 56.25 |
| Os11t0588600-01 | Rice | cytosol, plasma membrane | 12.85 | 45.79 |
| Zm00001d004771_P001 | Maize | cytosol | 47.69 | 45.09 |
| Zm00001d004772_P006 | Maize | cytosol | 47.58 | 45.0 |
| TraesCSU01G001700.1 | Wheat | cytosol | 12.54 | 41.5 |
| Os11t0588400-01 | Rice | cytosol | 38.34 | 40.94 |
| Os11t0590700-01 | Rice | cytosol | 34.43 | 39.23 |
| TraesCSU01G243100.1 | Wheat | cytosol | 11.51 | 38.89 |
| TraesCSU01G213800.1 | Wheat | cytosol | 8.84 | 36.75 |
| TraesCSU01G214600.1 | Wheat | cytosol | 8.84 | 36.75 |
| TraesCSU01G234400.1 | Wheat | cytosol | 8.84 | 36.75 |
| TraesCSU01G001800.1 | Wheat | cytosol | 33.92 | 34.88 |
| Os07t0294100-00 | Rice | cytosol | 24.87 | 34.23 |
| Os11t0590900-00 | Rice | cytosol | 14.49 | 33.49 |
| KXG22895 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 33.3 | 27.93 |
Protein Annotations
| EnsemblPlants:TraesCSU01G098900.1 | EnsemblPlantsGene:TraesCSU01G098900 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF23 | PFAM:PF00931 | SEG:seg |
| SUPFAM:SSF52047 | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrUn:+:87336369..87342943
Molecular Weight (calculated)
110791.0 Da
IEP (calculated)
5.967
GRAVY (calculated)
-0.262
Length
973 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFATGAMNS LLPKLGELLM EQYELKESVK KGIEELKAEL ESMQAALVKV SRVPLDQLDP QVKIWANEVR ELSYAIEDSL DSFMTRVEGV EPTKPKIKHL
101: LRTARNEFTK FKARHEIASD IKDIESQVRK IKERYDRYKF DDVVANFATT TVDPRLKSLY NKVSDLVGID KVIDELVKNP NTKKVLRDIL LELDTQLYTA
201: AATMDDRQLI NQLQKVLAGK RYFIVIDDIW DTQTWETIKC AFEDSHPKSR LIITTRIVDV AMKAGGIYHM QPLSEDYSKM LFYTRTSGSE GPPEVTTNFL
301: KKCCGVPLAI IIIASLLVAK HSKDWSKVYD AIGFGHEESD DVRNTRKILS FSYYDLSSNL KTCLLYLSLF PEDSLIDKIS LIWRWVSEGF IPYREGMESF
401: ELGEIYFNKL VNKSMIRWID PDDNDGRGGC RVHDMVLDLI LTISNDVNLV TIHDMEQHGT CSRGKRTNWV RRLALHGSGE HNSSLALEHV RSFNVVDWRA
501: NNMPLLLRFK VLHMLVIEDC VFSEGSSLQH LGKLVQLRYL GLVNTAVKIP EGIGHDLKFL EILDVRGGLI SELPPSVGEL MNLRCLWASR HTVMKGEIGK
601: LTCLEELELY SVEKCPNFFT EVGKLTKLRV LKIFSSEIEE SAGKALMKSL PNLQKIHSLT FLDDGGKARY SVAPNHSLEG LASCTKLYEL VLPIIVIARV
701: PSWINHLSVP LLSRLGLHVD AVEVRDVQTI GRLPSLLALA LWSKNEKKIS YTFGSNEFHR LRWLFTKKIE ISIGEGALPM LEELIYGASA GRKDGVSLVP
801: WRTNNSPFLK DVTCWIDYAN SGYREVCEAD EALREAAATH PNAEYLSLNI EIENYDMEAA KFIDNLQWIL HDLDTPKDVG CPAYHYQEER IHRMIRSLER
901: RLRDAAEPWV GRYSEQEIRG LVSKFKSWLH DHAGTDQDEA GKSDATVSED EDHYYCFHKD DQAEADDAEA SCN
101: LRTARNEFTK FKARHEIASD IKDIESQVRK IKERYDRYKF DDVVANFATT TVDPRLKSLY NKVSDLVGID KVIDELVKNP NTKKVLRDIL LELDTQLYTA
201: AATMDDRQLI NQLQKVLAGK RYFIVIDDIW DTQTWETIKC AFEDSHPKSR LIITTRIVDV AMKAGGIYHM QPLSEDYSKM LFYTRTSGSE GPPEVTTNFL
301: KKCCGVPLAI IIIASLLVAK HSKDWSKVYD AIGFGHEESD DVRNTRKILS FSYYDLSSNL KTCLLYLSLF PEDSLIDKIS LIWRWVSEGF IPYREGMESF
401: ELGEIYFNKL VNKSMIRWID PDDNDGRGGC RVHDMVLDLI LTISNDVNLV TIHDMEQHGT CSRGKRTNWV RRLALHGSGE HNSSLALEHV RSFNVVDWRA
501: NNMPLLLRFK VLHMLVIEDC VFSEGSSLQH LGKLVQLRYL GLVNTAVKIP EGIGHDLKFL EILDVRGGLI SELPPSVGEL MNLRCLWASR HTVMKGEIGK
601: LTCLEELELY SVEKCPNFFT EVGKLTKLRV LKIFSSEIEE SAGKALMKSL PNLQKIHSLT FLDDGGKARY SVAPNHSLEG LASCTKLYEL VLPIIVIARV
701: PSWINHLSVP LLSRLGLHVD AVEVRDVQTI GRLPSLLALA LWSKNEKKIS YTFGSNEFHR LRWLFTKKIE ISIGEGALPM LEELIYGASA GRKDGVSLVP
801: WRTNNSPFLK DVTCWIDYAN SGYREVCEAD EALREAAATH PNAEYLSLNI EIENYDMEAA KFIDNLQWIL HDLDTPKDVG CPAYHYQEER IHRMIRSLER
901: RLRDAAEPWV GRYSEQEIRG LVSKFKSWLH DHAGTDQDEA GKSDATVSED EDHYYCFHKD DQAEADDAEA SCN
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.