Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G028200.2 | Wheat | cytosol | 27.8 | 86.51 |
| TraesCS2A01G026300.1 | Wheat | cytosol | 26.53 | 84.23 |
| TraesCS2A01G026100.1 | Wheat | cytosol | 41.01 | 83.08 |
| TraesCSU01G001700.1 | Wheat | cytosol | 24.52 | 78.91 |
| TraesCS2B01G039500.1 | Wheat | cytosol | 20.08 | 76.61 |
| HORVU2Hr1G004070.4 | Barley | cytosol | 43.76 | 72.13 |
| TraesCSU01G213800.1 | Wheat | cytosol | 15.12 | 61.11 |
| TraesCSU01G214600.1 | Wheat | cytosol | 15.12 | 61.11 |
| TraesCSU01G234400.1 | Wheat | cytosol | 15.12 | 61.11 |
| TraesCSU01G243100.1 | Wheat | cytosol | 16.07 | 52.78 |
| TraesCSU01G232900.1 | Wheat | nucleus | 15.33 | 50.35 |
| TraesCSU01G086000.1 | Wheat | cytosol | 21.04 | 47.84 |
| Os11t0657900-00 | Rice | cytosol | 39.75 | 36.5 |
| TraesCSU01G098900.1 | Wheat | cytosol | 34.88 | 33.92 |
Protein Annotations
| EnsemblPlants:TraesCSU01G001800.1 | EnsemblPlantsGene:TraesCSU01G001800 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF25 | PFAM:PF00931 | PRINTS:PR00364 |
| SEG:seg | SUPFAM:SSF52058 | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrUn:-:2011760..2018823
Molecular Weight (calculated)
107415.0 Da
IEP (calculated)
6.643
GRAVY (calculated)
-0.144
Length
946 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMSMATGAM GSLLPKLVKL LKEEYKLKES VKEGVRSLEE EMKSMQAALR MVGEVPRDQL NEHVKIWAAE VRELSFKMED IVDKFFVRVD DGSEPAASPK
101: KLKRLTKKMV GLFTKGKARH EISDAIKSIN KKVQEVADRR ARYNVDNIVA RPAAVTPIDP RLGALYKEVT DLVGITGTRD KEIIKLLSEG DDVSKKKLKI
201: ISVVGFGGLG KTTLVKTVYD KIKGDFECRA FVPVGRNANA KEVFMDILHE LDPQKDKGQL TMLNERQLID KIQLRLENKR YLVVIDDIWD GNLWTVINWA
301: FSNNNTLGSR LITTTRKVDV AELCCTSPNG SVYQMKPLSA DDSKRLFYRR LFSHESGCPL EFEEVSMDIL KKCGGVPLAI ITIASSLSSG QQVKPKDEWH
401: VLLESIGRGL TEDPSVEEML RILSFSYYDL PAYLKTCLLY LSMFPEDHKI MKNQLIWMWI AEGFIQCETT QSSLFEIGEN YFNELVNRSL LQPVYVNNMS
501: GHVHACRVHD SVLDLICLLA REENFVSVSN GSISSQGNVR RLSLQKIIKE EHETTPLESV SMLQVRSIAT FEPAMGLMYH LSSFVVLRVL NLSTCQLYDH
601: NLWGLWSLVH LRYLGLSDTQ LWELPEEVGK LRYLQVLDLS GNLSMKQLPS SITKLRRLMC LLYVKTCNRF PDEIGNLTSM EELSCIHVDS LNIVKEMGNL
701: KRLRKFEVEF EHLSLELQEA FLKSLGEMSN VQSVTITIDG RYKMMDLFGE KWVPPRGLRE LKSCFGREFR FSRMPAWIRE NPSQLAQLSH LFIAVKEVQQ
801: VDLRLLGRLP ALVSLFLKSL RHGPLLIDAD GFRCLTEFTL WSSSPGQVMF QSGALPMVDL IIFRTGLPVV GDWVDMGIEN LQSLRLVNVE ICISPMECDY
901: EAAHKVYSVL ENALPAHPNS PKYVVRITVN DSDENESKGG DDDEWE
101: KLKRLTKKMV GLFTKGKARH EISDAIKSIN KKVQEVADRR ARYNVDNIVA RPAAVTPIDP RLGALYKEVT DLVGITGTRD KEIIKLLSEG DDVSKKKLKI
201: ISVVGFGGLG KTTLVKTVYD KIKGDFECRA FVPVGRNANA KEVFMDILHE LDPQKDKGQL TMLNERQLID KIQLRLENKR YLVVIDDIWD GNLWTVINWA
301: FSNNNTLGSR LITTTRKVDV AELCCTSPNG SVYQMKPLSA DDSKRLFYRR LFSHESGCPL EFEEVSMDIL KKCGGVPLAI ITIASSLSSG QQVKPKDEWH
401: VLLESIGRGL TEDPSVEEML RILSFSYYDL PAYLKTCLLY LSMFPEDHKI MKNQLIWMWI AEGFIQCETT QSSLFEIGEN YFNELVNRSL LQPVYVNNMS
501: GHVHACRVHD SVLDLICLLA REENFVSVSN GSISSQGNVR RLSLQKIIKE EHETTPLESV SMLQVRSIAT FEPAMGLMYH LSSFVVLRVL NLSTCQLYDH
601: NLWGLWSLVH LRYLGLSDTQ LWELPEEVGK LRYLQVLDLS GNLSMKQLPS SITKLRRLMC LLYVKTCNRF PDEIGNLTSM EELSCIHVDS LNIVKEMGNL
701: KRLRKFEVEF EHLSLELQEA FLKSLGEMSN VQSVTITIDG RYKMMDLFGE KWVPPRGLRE LKSCFGREFR FSRMPAWIRE NPSQLAQLSH LFIAVKEVQQ
801: VDLRLLGRLP ALVSLFLKSL RHGPLLIDAD GFRCLTEFTL WSSSPGQVMF QSGALPMVDL IIFRTGLPVV GDWVDMGIEN LQSLRLVNVE ICISPMECDY
901: EAAHKVYSVL ENALPAHPNS PKYVVRITVN DSDENESKGG DDDEWE
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.