Factsheet for TraesCS1D01G029200.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G035400.1	Wheat	cytosol	30.95	91.33
TraesCS1D01G028200.1	Wheat	cytosol	88.77	88.31
HORVU1Hr1G012180.1	Barley	cytosol	26.23	86.81
TraesCS1D01G028700.1	Wheat	cytosol	47.74	81.98
TraesCS1D01G028600.1	Wheat	plasma membrane	80.17	79.5
TraesCS1D01G029100.2	Wheat	cytosol	78.7	74.85
TraesCS5D01G344600.1	Wheat	cytosol	59.18	58.39
TraesCS1D01G267200.1	Wheat	cytosol	51.63	56.75
TraesCS2D01G028200.2	Wheat	cytosol	17.94	56.25
TraesCS1D01G396500.1	Wheat	cytosol	16.26	55.36
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	58.45	55.31
TraesCS2D01G028300.1	Wheat	cytosol	54.67	55.13
TraesCS3D01G460000.1	Wheat	cytosol	32.63	52.89
TraesCS2D01G003200.1	Wheat	cytosol	55.19	52.71
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	34.73	52.62
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	34.73	52.62
TraesCS3D01G021900.1	Wheat	cytosol	27.49	51.57
TraesCS7D01G542300.1	Wheat	cytosol	30.12	50.8
TraesCS7D01G006300.1	Wheat	cytosol	29.8	50.62
TraesCS7D01G005200.1	Wheat	cytosol	17.31	50.46
TraesCS7D01G099900.1	Wheat	cytosol	19.83	48.84
TraesCS2D01G574300.1	Wheat	cytosol	29.7	48.71
TraesCS3D01G474200.1	Wheat	cytosol	25.81	48.62
TraesCS1D01G006000.1	Wheat	cytosol	38.41	48.54
TraesCS7D01G099800.1	Wheat	cytosol	25.18	48.48
TraesCS2D01G574500.1	Wheat	cytosol	16.89	46.8
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	13.64	46.59
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	44.91	46.57
TraesCS2D01G590900.1	Wheat	cytosol	29.28	46.5
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	12.49	46.48
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	8.29	46.47
TraesCS3D01G541500.1	Wheat	cytosol	7.03	46.21
TraesCS3D01G473700.1	Wheat	plasma membrane	43.13	45.07
TraesCS7D01G106100.2	Wheat	cytosol	43.76	45.03
TraesCS7D01G106200.2	Wheat	cytosol	13.22	44.52
TraesCS1D01G032200.2	Wheat	cytosol	44.39	44.06
TraesCS2D01G028400.1	Wheat	plastid	43.65	43.7
TraesCS1D01G006800.1	Wheat	cytosol	43.65	43.06
TraesCS1D01G005900.1	Wheat	cytosol	17.42	42.24
TraesCS3D01G082100.1	Wheat	cytosol	40.82	42.19
TraesCS1D01G006300.1	Wheat	cytosol	27.81	42.06
TraesCS3D01G474000.2	Wheat	extracellular, plasma membrane	43.55	41.96
TraesCS7D01G429600.1	Wheat	cytosol	34.84	41.92
TraesCS7D01G106300.1	Wheat	cytosol	26.23	41.32
TraesCS7D01G105600.1	Wheat	cytosol	25.18	41.24
TraesCS2D01G574400.1	Wheat	cytosol	41.34	40.83
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	42.71	40.82
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	38.3	40.65
TraesCS2D01G591300.1	Wheat	cytosol	31.27	40.32
TraesCS6D01G100300.1	Wheat	cytosol	39.35	40.19
TraesCS4D01G315100.1	Wheat	plasma membrane	37.88	39.98
TraesCS2D01G575000.1	Wheat	cytosol	33.58	39.85
TraesCS2D01G590700.1	Wheat	cytosol	33.89	38.87
Os11t0657900-00	Rice	cytosol	41.45	38.35
TraesCS7D01G538200.2	Wheat	cytosol	39.03	38.23
TraesCS1D01G005300.1	Wheat	cytosol	35.89	38.21
TraesCS7D01G429500.1	Wheat	cytosol	31.16	38.17
TraesCS2D01G591200.1	Wheat	cytosol	21.83	38.03
TraesCS7D01G008200.1	Wheat	cytosol	25.18	37.62
TraesCS7D01G006800.1	Wheat	cytosol	26.23	37.59
TraesCS2D01G590800.2	Wheat	extracellular	33.89	37.21
TraesCS2D01G069600.2	Wheat	extracellular	41.87	36.57
TraesCS6D01G013000.1	Wheat	cytosol	38.61	36.4
TraesCS6D01G012700.1	Wheat	plasma membrane	37.67	35.58
TraesCS6D01G012600.2	Wheat	cytosol	38.09	35.48
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	38.72	35.31
TraesCS5D01G021700.1	Wheat	cytosol	39.77	35.22
TraesCS2D01G057600.1	Wheat	cytosol	39.35	34.66
TraesCS2D01G503500.1	Wheat	cytosol	19.83	34.55
TraesCS2D01G601200.1	Wheat	cytosol	36.2	31.86
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	33.68	28.51
TraesCS2D01G503400.1	Wheat	cytosol	7.03	11.57

Protein Annotations

EnsemblPlants:TraesCS1D01G029200.3	EnsemblPlantsGene:TraesCS1D01G029200	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1D:+:11494275..11498164

Molecular Weight (calculated)

107875.0 Da

IEP (calculated)

6.885

GRAVY (calculated)

-0.178

Length

953 amino acids

Sequence
(BLAST)

001: MEVVTGAMGS LLPKLGQLLM DEYNLHKRVK KDVRFLSMEL ESMHAALIKV GEVPRDQLDM QVKLWAEEVR ELSYNMEDVV DKFLVRVDGD GIQQTHDNSG
101: RFKELKNKMI GLFKKGKNHH RIADAVKEIK EQLQEVAARR DRNKVVVPNP TEPITIDPCL RALYAEATEL VGIYGKRDQE LMRLLSMEGD DASNKRLKKV
201: SIVGFGGLGK TTLARAIYDK IKGDFDCRAF VPVGQNPDMK KVLRDILIDL GNPHSDLAML DANQLIKKLQ EFLENKRYLV IIDDIWDEKL WGGINFAFSN
301: RNNLGSRLIT TTRIVSVSNS CCSSADDSIY KMEPLSTDDS RRLFYKRIFP NDSGCPNEFE QVSKDILKKC GGVPLAIITI ASALTSGQKM KPKHEWDILL
401: QSLGSGLTED NSLEEMRRIL SFSYYNLPSH LKTCLLYLCI YPEDREINRD RLIWKWVAEG FVHHGNQGTS LFLLGLNYFN QLINRSMIQP IYDDIGQVHA
501: CRVHDMVLDL ICNLSHEAKF VNVLDGTGNS MSSQSNVRRL SLQNKMEDHQ AKPLTNIMSM SRVRSITIFP PAVSIMPALS RFEVLCVLDM SDCNLGESSS
601: LQPNLKGVGH LIHLRYLGLS GTRISKLPAE IENLQFLEVL DLGNNYELDE LPFILFKWRR LICLNVYPYK VVPTPGVLQN MTSIEVLRGI LVSLNIIAQE
701: LGKLARLREL QIRFKDGSLD LYEGFVKSLC NLHQIESLII DCNSEEASFE LMDHLGECWV PPVHLREFVS YMPSQLSALR GWIKRDPSHL SNLSELILTS
801: VKEVQQEDVE IIGGLLSLRR LRIWSTHQTQ RLLVIRADGF RCMVHFDLNC RSATQIMFEL GALPRAESVL FSLGLRVAKE DGNSGFDLGL QGNLLSLRRG
901: VRIWMYSGGA RVGEAKEAKA AVRHALDAHP NHPPTEIDMF PQIAEGAQDD DLM

Best Arabidopsis Sequence Match ( AT1G59780.2 )
(BLAST)

001: MVDSIVSFGV EKLWKLLSQE YERFQGVEEQ ITELRDDLKM LMAFLSDADA KKQTRALARN CLEEIKEITY DAEDIIEIFL LKGSVNMRSL ACFPGGRREI
101: ALQITSISKR ISKVIQVMQN LGIKSDIMDG VDSHAQLERK RELRHTFSSE SESNLVGLEK NVEKLVEELV GNDSSHGVSI TGLGGLGKTT LARQIFDHDK
201: VKSHFDGLAW VCVSQEFTRK DVWKTILGNL SPKYKDSDLP EDDIQKKLFQ LLETKKALIV FDDLWKREDW YRIAPMFPER KAGWKVLLTS RNDAIHPHCV
301: TFKPELLTHD ECWKLLQRIA FSKQKTITGY IIDKEMVKMA KEMTKHCKRL PLAVKLLGGL LDAKHTLRQW KLISENIISH IVVGGTSSNE NDSSSVNHVL
401: SLSFEGLPGY LKHCLLYLAS YPEDHEIEIE RLSYVWAAEG ITYPGNYEGA TIRDVADLYI EELVKRNMVI SERDALTSRF EKCQLHDLMR EICLLKAKEE
501: NFLQIVTDPT SSSSVHSLAS SRSRRLVVYN TSIFSGENDM KNSKLRSLLF IPVGYSRFSM GSNFIELPLL RVLDLDGAKF KGGKLPSSIG KLIHLKYLSL
601: YQASVTYLPS SLRNLKSLLY LNLRINSGQL INVPNVFKEM LELRYLSLPW ERSSLTKLEL GNLLKLETLI NFSTKDSSVT DLHRMTKLRT LQILISGEGL
701: HMETLSSALS MLGHLEDLTV TPSENSVQFK HPKLIYRPML PDVQHFPSHL TTISLVYCFL EEDPMPTLEK LLQLKVVSLW YNAYVGRRMV CTGGGFPPLH
801: RLEIWGLDAL EEWIVEEGSM PLLHTLHIVD CKKLKEIPDG LRFISSLKEL AIRTNEKVFQ KKVSKGGEDY YKMQHVPLIR YNWPQEPENN EVN

Arabidopsis Description

Putative disease resistance protein At1g59780 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIF0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.