Factsheet for TraesCS1D01G028200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G028700.2	Wheat	cytosol	38.94	91.2
HORVU1Hr1G012180.1	Barley	cytosol	27.14	90.28
TraesCS1D01G029200.3	Wheat	cytosol	88.31	88.77
TraesCS1B01G034500.1	Wheat	cytosol	84.86	85.31
TraesCS1A01G028800.1	Wheat	cytosol, golgi, mitochondrion, plastid	45.93	81.18
TraesCS1D01G028700.1	Wheat	cytosol	46.24	79.82
TraesCS1D01G028600.1	Wheat	plasma membrane	79.23	78.98
TraesCS1D01G029100.2	Wheat	cytosol	78.91	75.45
TraesCS5D01G344600.1	Wheat	cytosol	59.08	58.59
TraesCS1D01G267200.1	Wheat	cytosol	50.84	56.17
TraesCS1D01G396500.1	Wheat	cytosol	16.39	56.07
TraesCS2D01G028200.2	Wheat	cytosol	17.54	55.26
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	57.83	55.01
TraesCS2D01G028300.1	Wheat	cytosol	53.86	54.6
TraesCS3D01G460000.1	Wheat	cytosol	32.78	53.4
TraesCS2D01G003200.1	Wheat	cytosol	54.7	52.51
TraesCS3D01G021900.1	Wheat	cytosol	27.66	52.17
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	33.3	50.72
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	33.3	50.72
TraesCS7D01G006300.1	Wheat	cytosol	29.44	50.27
TraesCS7D01G005200.1	Wheat	cytosol	17.12	50.15
TraesCS7D01G099900.1	Wheat	cytosol	20.25	50.13
TraesCS7D01G542300.1	Wheat	cytosol	28.91	49.03
TraesCS7D01G099800.1	Wheat	cytosol	25.26	48.89
TraesCS2D01G574300.1	Wheat	cytosol	29.02	47.85
TraesCS1D01G006000.1	Wheat	cytosol	37.47	47.61
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	13.67	46.95
TraesCS3D01G541500.1	Wheat	cytosol	7.1	46.9
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	12.42	46.48
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	8.25	46.47
TraesCS3D01G474200.1	Wheat	cytosol	24.53	46.44
TraesCS2D01G590900.1	Wheat	cytosol	28.71	45.83
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	43.95	45.81
TraesCS2D01G574500.1	Wheat	cytosol	16.28	45.35
TraesCS7D01G106100.2	Wheat	cytosol	43.63	45.14
TraesCS7D01G106200.2	Wheat	cytosol	13.15	44.52
TraesCS3D01G473700.1	Wheat	plasma membrane	42.38	44.52
TraesCS2D01G028400.1	Wheat	plastid	43.32	43.59
TraesCS1D01G032200.2	Wheat	cytosol	43.53	43.44
TraesCS1D01G006800.1	Wheat	cytosol	43.53	43.17
TraesCS3D01G082100.1	Wheat	cytosol	40.92	42.52
TraesCS1D01G005900.1	Wheat	cytosol	17.43	42.49
TraesCS7D01G429600.1	Wheat	cytosol	34.45	41.67
TraesCS1D01G006300.1	Wheat	cytosol	27.14	41.27
TraesCS3D01G474000.2	Wheat	extracellular, plasma membrane	42.59	41.25
TraesCS7D01G106300.1	Wheat	cytosol	25.99	41.16
TraesCS7D01G105600.1	Wheat	cytosol	24.95	41.07
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	42.07	40.42
TraesCS6D01G100300.1	Wheat	cytosol	38.83	39.87
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	37.27	39.76
TraesCS2D01G574400.1	Wheat	cytosol	39.98	39.69
TraesCS2D01G591300.1	Wheat	cytosol	30.48	39.51
TraesCS2D01G575000.1	Wheat	cytosol	33.09	39.48
TraesCS4D01G315100.1	Wheat	plasma membrane	36.95	39.2
TraesCS2D01G591200.1	Wheat	cytosol	21.92	38.39
TraesCS2D01G590700.1	Wheat	cytosol	33.3	38.39
TraesCS1D01G005300.1	Wheat	cytosol	35.59	38.1
TraesCS7D01G429500.1	Wheat	cytosol	30.9	38.05
TraesCS7D01G538200.2	Wheat	cytosol	38.62	38.03
TraesCS2D01G590800.2	Wheat	extracellular	34.24	37.79
Os11t0657900-00	Rice	cytosol	40.29	37.48
TraesCS7D01G008200.1	Wheat	cytosol	24.74	37.15
TraesCS7D01G006800.1	Wheat	cytosol	25.78	37.14
TraesCS2D01G069600.2	Wheat	extracellular	41.44	36.39
TraesCS6D01G012700.1	Wheat	plasma membrane	37.58	35.68
TraesCS6D01G013000.1	Wheat	cytosol	37.16	35.21
TraesCS5D01G021700.1	Wheat	cytosol	39.46	35.13
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	37.79	34.64
TraesCS6D01G012600.2	Wheat	cytosol	36.95	34.6
TraesCS2D01G503500.1	Wheat	cytosol	19.73	34.55
TraesCS2D01G057600.1	Wheat	cytosol	38.31	33.92
TraesCS2D01G601200.1	Wheat	cytosol	35.49	31.39
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	32.88	27.98
TraesCS2D01G503400.1	Wheat	cytosol	7.62	12.61

Protein Annotations

EnsemblPlants:TraesCS1D01G028200.1	EnsemblPlantsGene:TraesCS1D01G028200	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1D:+:11177050..11180798

Molecular Weight (calculated)

108152.0 Da

IEP (calculated)

6.572

GRAVY (calculated)

-0.160

Length

958 amino acids

Sequence
(BLAST)

001: MNIVTGAMGS LIPKLGELLM EEYKLHKRVK KDVEFLGKEL ESMHAALIKV GEVPREQLDR QVKLWADEVR DLSYNMEDVV DKFLVRVDGD GIQQPHDNSG
101: RFKELKNKMI GLFKKGKNHH RIADAVKEIK EQLQEVAARR DRNKVVVPNP TEPITIDPCL RALYAEATEL VGIYGKRDQE LMRLLSMEGD DASNKRLKKV
201: SIVGFGGLGK TTLASAVYEK IKGDFDCRAF VPVGQNPDMK KVLRDILIDL GNPHSDLAIL DANQLIKKLH DFLENKRYLV IIDDIWDEKL WEGINFAFSN
301: KNSLGSRLIT TTRNFDVSKS CCLSADDSIY KMKPLSTDDS RRLFHKRIFP DASGCPSEFQ QVSEDILKKC GGVPLAIITI ASALASDQQV KPKHEWDILL
401: QSLGSGVTTD NSLVEMRRVL SLSYYNLPSH LKTCLLYLCI YPEDSTIDKD RLIWKWVAEG FVHHGDQGTS QFLVGLNYFN QLINRSMIQP IYSDMGNVYA
501: CRVHDMVLDL ICNLSHEAKF VNVLDATGNS MSSQSNVRRL SLQNKMEDHQ AKPLTNIMSM SRVRSITIFP PAVSIMPALS RFEVLRVLDM SYCNLGKSSS
601: LQLNIKGVGH LIHLRYLGLK STGISELPAE IENLQFLEVL DLGNNYELDE LPFILFKWRR LICLNVYPYK VVPTPGVLQN MTSIEVLRGI LVSLNIIAQE
701: LGNLARLREL QIRFKDGSLD LYEGFVKSLC NLHHIGSLSI SCNSEETSFE LMDLLGERWV PPVHLREFAS FMPSQLSALR GWIERDPSHL SNLSELFLTS
801: VKEVQQEDVE IIGGLLSLRR LWITRTHQTQ RLLVICADGF RCMVDFNLNC GSAAQIIFES GALPRAEAVY FSLGVRVAKE DGNCDFDLGL QGNLLSLRRR
901: VCVYMYCGGA RVGEAKEAEA AVRHALDAHP NHPPIDIYMI PRIAKDAHDD DLCEDEEN

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.