Factsheet for TraesCS1D01G032200.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G542300.1	Wheat	cytosol	39.69	67.43
TraesCS1D01G006000.1	Wheat	cytosol	51.67	65.78
TraesCS1D01G006300.1	Wheat	cytosol	42.92	65.4
Os10t0124400-00	Rice	cytosol	17.71	60.28
TraesCS7D01G099900.1	Wheat	cytosol	23.75	58.91
TraesCS3D01G541500.1	Wheat	cytosol	8.85	58.62
TraesCS3D01G473800.2	Wheat	cytosol, endoplasmic reticulum	37.6	57.39
TraesCS3D01G472700.1	Wheat	cytosol, endoplasmic reticulum	37.6	57.39
TraesCS7D01G099800.1	Wheat	cytosol	29.48	57.17
TraesCS7D01G106200.2	Wheat	cytosol	16.04	54.42
TraesCS3D01G474100.1	Wheat	cytosol, extracellular	9.58	54.12
TraesCS3D01G474200.1	Wheat	cytosol	28.44	53.95
Os01t0603100-01	Rice	extracellular	30.73	53.73
TraesCS7D01G106100.2	Wheat	cytosol	51.67	53.56
TraesCS3D01G541600.1	Wheat	cytosol, extracellular	15.42	53.05
TraesCS3D01G474300.1	Wheat	extracellular, plasma membrane	50.21	52.45
TraesCS3D01G472900.1	Wheat	cytosol, extracellular	13.96	52.34
TraesCS3D01G473700.1	Wheat	plasma membrane	48.75	51.32
TraesCS3D01G021900.1	Wheat	cytosol	26.35	49.8
TraesCS7D01G106300.1	Wheat	cytosol	31.25	49.59
TraesCS3D01G474000.2	Wheat	extracellular, plasma membrane	50.73	49.24
TraesCS3D01G460000.1	Wheat	cytosol	29.79	48.64
TraesCS7D01G105600.1	Wheat	cytosol	28.75	47.42
TraesCS1D01G396500.1	Wheat	cytosol	13.65	46.79
TraesCS2D01G574300.1	Wheat	cytosol	28.23	46.64
TraesCS7D01G006300.1	Wheat	cytosol	26.67	45.63
TraesCS1D01G029200.3	Wheat	cytosol	44.06	44.39
TraesCS1D01G267200.1	Wheat	cytosol	39.79	44.06
TraesCS1D01G028200.1	Wheat	cytosol	43.44	43.53
TraesCS2D01G590900.1	Wheat	cytosol	27.08	43.33
TraesCS1D01G028600.1	Wheat	plasma membrane	43.33	43.29
TraesCS2D01G028300.1	Wheat	cytosol	42.5	43.17
TraesCS6D01G100300.1	Wheat	cytosol	41.88	43.09
TraesCS2D01G574400.1	Wheat	cytosol	42.92	42.69
TraesCS2D01G574500.1	Wheat	cytosol	15.1	42.15
TraesCS2D01G028200.2	Wheat	cytosol	13.23	41.78
TraesCS5D01G344600.1	Wheat	cytosol	41.98	41.72
TraesCS2D01G003200.1	Wheat	cytosol	43.12	41.48
TraesCS1D01G029100.2	Wheat	cytosol	42.29	40.52
TraesCS5D01G366600.1	Wheat	cytosol, nucleus, plastid, vacuole	42.5	40.52
TraesCS1D01G005900.1	Wheat	cytosol	16.56	40.46
TraesCS1D01G006800.1	Wheat	cytosol	40.21	39.96
TraesCS6D01G012900.1	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	37.08	39.64
TraesCS7D01G429600.1	Wheat	cytosol	32.5	39.39
TraesCS1D01G028700.1	Wheat	cytosol	22.71	39.28
TraesCS2D01G591300.1	Wheat	cytosol	30.21	39.24
TraesCS7D01G005200.1	Wheat	cytosol	13.33	39.14
TraesCS2D01G575000.1	Wheat	cytosol	32.6	38.98
TraesCS4D01G315100.1	Wheat	plasma membrane	36.25	38.54
TraesCS3D01G082100.1	Wheat	cytosol	36.98	38.5
TraesCS2D01G591200.1	Wheat	cytosol	21.56	37.84
TraesCS6D01G005300.1	Wheat	cytosol, extracellular, plastid	38.96	37.51
TraesCS2D01G590700.1	Wheat	cytosol	32.19	37.18
TraesCS7D01G538200.2	Wheat	cytosol	37.6	37.1
TraesCS1D01G005300.1	Wheat	cytosol	33.96	36.42
TraesCS6D01G012700.1	Wheat	plasma membrane	37.81	35.98
TraesCS7D01G006800.1	Wheat	cytosol	24.9	35.94
TraesCS7D01G429500.1	Wheat	cytosol	28.75	35.48
TraesCS5D01G021700.1	Wheat	cytosol	39.69	35.41
TraesCS2D01G590800.2	Wheat	extracellular	31.77	35.14
TraesCS7D01G008200.1	Wheat	cytosol	23.23	34.95
TraesCS2D01G057600.1	Wheat	cytosol	39.17	34.75
TraesCS2D01G503500.1	Wheat	cytosol	19.79	34.73
TraesCS2D01G028400.1	Wheat	plastid	34.27	34.56
TraesCS6D01G013000.1	Wheat	cytosol	36.25	34.42
TraesCS6D01G012600.2	Wheat	cytosol	36.15	33.92
TraesCS6D01G013100.1	Wheat	endoplasmic reticulum	36.88	33.88
TraesCS2D01G601200.1	Wheat	cytosol	38.02	33.7
TraesCS2D01G069600.2	Wheat	extracellular	36.67	32.26
TraesCS2D01G574700.1	Wheat	cytosol, extracellular, golgi, mitochondrion	35.62	30.37
TraesCS2D01G503400.1	Wheat	cytosol	6.77	11.23

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1D01G032200	EnsemblPlants:TraesCS1D01G032200.2	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr1D:+:12532825..12536376

Molecular Weight (calculated)

108932.0 Da

IEP (calculated)

7.695

GRAVY (calculated)

-0.190

Length

960 amino acids

Sequence
(BLAST)

001: MEIAAGAMTP LLRKLGGLLL DEYNLEKRVK KGVTSLLTEL EMMHAALRKV GKKPPEELDE QVRIWADKVR ELCYNMEDAV DAFMVLVEGN KYHERGPNNM
101: KNRVKKFLKK TTKLFSRGKA LHEIGDAMDE AKELAKELGD LRQRYMLEGH AGETRDTIDP RLEVMYKDVS ELVGIEHKRK ELIKMLREGD ENGKQQPKAI
201: SIVGSGGLGK TTLAKAVYDK LIGQYDCEAF VSVSRNPDIK KIFKKMLHQL DRKRYASINE AVRDEEQLID ELNMSLHCKR YLIVIDDIWD EEDWRIIKCA
301: FSKSVGSAVI MTTRKISVSK ACHLSGDDMV YEMKPLTEGD SQRLFYKRIF PQGSDCPSQL EQVSRNILRK CGGVPLAIIT IASLLASNEQ QIKPKYQWDN
401: ILNSMGRGLA EGGSVKDMRR ILSFSYYDLP SHLKTCFLYL SIFPEDFEIR RDRLIWRWIA EGLVQGGKQE SRPFELGESY FNELANRNLI QPVDIDVEGR
501: ASACRVHDMV LDLICSLSSE ENFVTVLDGT VKSKPSSHIK VRLLSFQNSM SELTTHRVDA TSMPQLRSVT LFRTDVDLIQ ALPSFQILRV LDLEGCNLGE
601: SSHKVDLSCV ENLLHLRYLG LRDTRVGILP MEIGKLRFLE TLDLRVGGSA EVPSSVVRLG HLMCLYVDPD VRLSVGMGNL VSLEELTTVK VGGTVAIEKE
701: LGQLIELRVL QLEWTGDDDS VCSSLVVSLG NLRKLQSLII FRQGGLRFDV IWDSWVPPPH LRTFEFVGCT LTMPKWINSS VLPLLSILRI EVKRVQPEVD
801: IQILGKLPAL RFLYLETTKD QYTRAESFIV GADAFPCLRE CYLYYFQTGP SIFPRGAMPR LEVLYFFARA LHIAGGELDV GMDHLPSLRR VMVSLCPEKD
901: EIIDKIDEAA AMIYPQNGNK RKKNDGDRLR RWDSCALESI LSILICRQFF LACSKKAKSK

Best Arabidopsis Sequence Match ( AT5G35450.2 )
(BLAST)

001: MAEGVVSFGV QKLWALLNRE SERLNGIDEQ VDGLKRQLRG LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKNHVRRLAC
101: FLTDRHKVAS DIEGITKRIS KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI DNIQVVSISG MGGIGKTTLA
201: RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
301: EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN
401: SVYRILSLSY EDLPTDLKHC FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR LKLCQMHDMM REVCISKAKV
501: ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
601: HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT
701: FENLSSSLRQ FRKLETLSFI YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI LEKLLHLKSV ELRRKAFIGR
801: RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
901: E

Arabidopsis Description

RPP8L3Disease resistance RPP8-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.