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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G004070.4 Barley cytosol 69.88 68.29
HORVU1Hr1G012180.1 Barley cytosol 30.12 58.68
TraesCS2B01G039600.1 Wheat cytosol 82.89 49.36
TraesCS2D01G028300.1 Wheat cytosol 82.53 48.99
HORVU7Hr1G023660.1 Barley cytosol 19.79 48.05
HORVU1Hr1G004080.2 Barley cytosol, extracellular, nucleus 60.78 47.89
HORVU7Hr1G100280.2 Barley cytosol 36.54 46.07
TraesCS2A01G026400.1 Wheat cytosol 73.44 43.19
HORVU1Hr1G012190.1 Barley cytosol, plasma membrane 57.58 39.63
HORVU5Hr1G085330.5 Barley cytosol 62.57 34.72
HORVU5Hr1G085290.2 Barley plasma membrane 61.68 34.7
HORVU6Hr1G028220.1 Barley cytosol, extracellular 50.45 33.89
HORVU7Hr1G023820.2 Barley cytosol 38.15 33.33
HORVU3Hr1G104770.2 Barley cytosol, plasma membrane, plastid 51.87 31.66
HORVU1Hr1G004140.1 Barley cytosol, plasma membrane 46.52 31.15
HORVU7Hr1G023770.1 Barley cytosol 49.55 30.05
HORVU7Hr1G095630.2 Barley cytosol 49.73 30.0
HORVU7Hr1G023730.1 Barley cytosol 47.24 28.59
HORVU2Hr1G040600.1 Barley cytosol 43.67 28.36
HORVU7Hr1G023750.1 Barley cytosol 46.7 28.32
HORVU3Hr1G099360.5 Barley cytosol 49.91 27.86
HORVU7Hr1G000230.45 Barley cytosol 41.0 27.19
Os11t0657900-00 Rice cytosol 49.38 26.89
HORVU5Hr1G068380.3 Barley cytosol 42.78 26.12
HORVU7Hr1G100250.47 Barley cytosol 47.59 25.87
HORVU2Hr1G011300.1 Barley cytosol, nucleus, plastid 42.42 25.67
HORVU7Hr1G121050.1 Barley cytosol 32.09 25.6
HORVU2Hr1G122810.1 Barley cytosol 43.14 25.39
HORVU7Hr1G100300.4 Barley cytosol 37.79 24.97
HORVU7Hr1G121150.11 Barley cytosol 32.09 23.9
HORVU6Hr1G002150.4 Barley cytosol, golgi, nucleus 46.17 22.58
HORVU2Hr1G012010.2 Barley cytosol 43.49 22.55
HORVU3Hr1G099740.7 Barley cytosol 44.03 22.39
HORVU5Hr1G063690.7 Barley cytosol 39.93 16.28
HORVU3Hr1G105020.36 Barley plasma membrane 14.44 15.98
HORVU3Hr1G014640.2 Barley cytosol 16.22 15.61
HORVU3Hr1G014650.1 Barley cytosol 15.86 15.34
HORVU3Hr1G014690.1 Barley cytosol 15.86 15.34
HORVU7Hr1G023650.1 Barley cytosol, mitochondrion 1.96 3.19
Protein Annotations
EnsemblPlants:HORVU2Hr1G004150.3EnsemblPlantsGene:HORVU2Hr1G004150Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0043531InterPro:NB-ARCInterPro:P-loop_NTPaseInterPro:RX-like_CCncoils:CoilPANTHER:PTHR43889
PANTHER:PTHR43889:SF25PFAM:PF00931PRINTS:PR00364SEG:segSUPFAM:SSF52540UniParc:UPI000295DBFA
UniProt:M0UFD9MapMan:35.1::::
Description
No Description!
Coordinates
chrchr2H:-:9340203..9345125
Molecular Weight (calculated)
63149.7 Da
IEP (calculated)
5.555
GRAVY (calculated)
-0.168
Length
561 amino acids
Sequence
(BLAST)
001: MAMSMATGAM GSLLPKLLEL LKDEYKLKKK VRDGVESLEK EMRSMEAALQ VLGEVPREQL DVQVKLWAGE VRELSFKMED VVDKFLVHVD DGSKPAAKSD
101: KLKLLTKKMA GLFTRGKARH EIADAIKDIN KQVQEVAGRR ARYNIDNVID RPAAVTPIDP RLGALYTEVT ELVGIAGKRD QEIMKLLSEG GDMAKKNLKI
201: ISVVGFGGMG KTTLVKTVYE KIEGDYDCTA FVPVGRKAEA KTVFTNILLN LGMNGSELIM LNEKLLIDKL REFLKNKRYL IVIDDIWDEE LWRVIKCAFS
301: SSNNFGSRLI TTTRIVSVCE SCCSSTNDSI YIMEPLSDED SERLFYKRIF SLESGCPPEF EEVSRDVLKK CGGVPLAIIT IASLLASGKQ VKPKNEWDAL
401: LESIGRGLTE NRSAKEMIRI LSFSYYDLPS HLKTCLLYLS MFPEDSEIMK DQLIWMWIAE SFVQRGKEKT SLFEVGETYF NELVNKSLIQ PVYDEFGFLY
501: ACRVHDSVLD LICSLSSEVN FVTIVSGTSD TMSSEGIVRR WSLQNARKEE GQTMPPRSES I
Best Arabidopsis Sequence Match ( AT5G43470.1 )
(BLAST)
001: MAEAFVSFGL EKLWDLLSRE SERLQGIDGQ LDGLKRQLRS LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLSGKGKG VKKHVRRLAC
101: FLTDRHKVAS DIEGITKRIS EVIGEMQSFG IQQIIDGGRS LSLQERQRVQ REIRQTYPDS SESDLVGVEQ SVKELVGHLV ENDVHQVVSI AGMGGIGKTT
201: LARQVFHHDL VRRHFDGFAW VCVSQQFTQK HVWQRILQEL QPHDGDILQM DEYALQRKLF QLLEAGRYLV VLDDVWKKED WDVIKAVFPR KRGWKMLLTS
301: RNEGVGIHAD PTCLTFRASI LNPEESWKLC ERIVFPRRDE TEVRLDEEME AMGKEMVTHC GGLPLAVKAL GGLLANKHTV PEWKRVFDNI GSQIVGGSWL
401: DDNSLNSVYR ILSLSYEDLP THLKHCFLNL AHFPEDSEIS TYSLFYYWAA EGIYDGSTIE DSGEYYLEEL VRRNLVIADD NYLSWQSKYC QMHDMMREVC
501: LSKAKEENFL QIIIDPTCTS TINAQSPSRS RRLSIHSGKA FHILGHKNKT KVRSLIVPRF EEDYWIRSAS VFHNLTLLRV LDLSWVKFEG GKLPCSIGGL
601: IHLRYLSLYE AKVSHLPSTM RNLKLLLYLN LRVDTEEPIH VPNVLKEMIQ LRYLSLPLKM DDKTKLELGD LVNLEYLYGF STQHSSVTDL LRMTKLRYLA
701: VSLSERCNFE TLSSSLRELR NLETLNFLFS LETYMVDYMG EFVLDHFIHL KQLGLAVRMS KIPDQHQFPP HLVHLFLIYC GMEEDPMPIL EKLLHLKSVR
801: LARKAFLGSR MVCSKGGFPQ LCVIEISKES ELEEWIVEEG SMPCLRTLTI DDCKKLKELP DGLKYITSLK ELKIEGMKRE WKEKLVPGGE DYYKVQHIPD
901: VQFINCDQ
Arabidopsis Description
RPP8Disease resistance protein RPP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4J9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.