Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G023730.1 | Barley | cytosol | 87.03 | 86.84 |
| HORVU7Hr1G023660.1 | Barley | cytosol | 20.97 | 83.98 |
| TraesCS7B01G008700.1 | Wheat | cytosol | 47.46 | 82.67 |
| HORVU7Hr1G023770.1 | Barley | cytosol | 80.97 | 80.97 |
| HORVU7Hr1G023820.2 | Barley | cytosol | 55.68 | 80.22 |
| HORVU7Hr1G095630.2 | Barley | cytosol | 59.68 | 59.35 |
| HORVU7Hr1G023650.1 | Barley | cytosol, mitochondrion | 21.73 | 58.26 |
| HORVU1Hr1G012180.1 | Barley | cytosol | 15.03 | 48.26 |
| HORVU3Hr1G104770.2 | Barley | cytosol, plasma membrane, plastid | 47.24 | 47.55 |
| HORVU2Hr1G004150.3 | Barley | cytosol | 28.32 | 46.7 |
| HORVU2Hr1G004070.4 | Barley | cytosol | 28.43 | 45.82 |
| HORVU1Hr1G004080.2 | Barley | cytosol, extracellular, nucleus | 34.81 | 45.22 |
| HORVU7Hr1G121050.1 | Barley | cytosol | 33.84 | 44.52 |
| HORVU3Hr1G105020.36 | Barley | plasma membrane | 24.0 | 43.79 |
| HORVU6Hr1G028220.1 | Barley | cytosol, extracellular | 38.92 | 43.11 |
| HORVU7Hr1G121150.11 | Barley | cytosol | 33.84 | 41.57 |
| HORVU1Hr1G012190.1 | Barley | cytosol, plasma membrane | 35.89 | 40.74 |
| HORVU7Hr1G100280.2 | Barley | cytosol | 18.92 | 39.33 |
| HORVU5Hr1G085330.5 | Barley | cytosol | 42.59 | 38.97 |
| HORVU5Hr1G085290.2 | Barley | plasma membrane | 40.65 | 37.71 |
| HORVU1Hr1G004140.1 | Barley | cytosol, plasma membrane | 33.62 | 37.11 |
| HORVU7Hr1G000230.45 | Barley | cytosol | 33.41 | 36.52 |
| HORVU3Hr1G099360.5 | Barley | cytosol | 39.35 | 36.22 |
| HORVU2Hr1G040600.1 | Barley | cytosol | 33.19 | 35.53 |
| HORVU5Hr1G068380.3 | Barley | cytosol | 35.24 | 35.47 |
| HORVU7Hr1G100300.4 | Barley | cytosol | 30.81 | 33.57 |
| HORVU2Hr1G122810.1 | Barley | cytosol | 34.05 | 33.05 |
| HORVU3Hr1G014640.2 | Barley | cytosol | 20.65 | 32.76 |
| HORVU3Hr1G014690.1 | Barley | cytosol | 20.43 | 32.59 |
| HORVU3Hr1G014650.1 | Barley | cytosol | 20.43 | 32.59 |
| HORVU2Hr1G011300.1 | Barley | cytosol, nucleus, plastid | 31.89 | 31.82 |
| HORVU7Hr1G100250.47 | Barley | cytosol | 35.35 | 31.69 |
| HORVU2Hr1G012010.2 | Barley | cytosol | 35.68 | 30.5 |
| HORVU6Hr1G002150.4 | Barley | cytosol, golgi, nucleus | 37.73 | 30.43 |
| HORVU3Hr1G099740.7 | Barley | cytosol | 36.11 | 30.28 |
| HORVU5Hr1G063690.7 | Barley | cytosol | 30.05 | 20.2 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A287VQE1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | EnsemblPlantsGene:HORVU7Hr1G023750 | EnsemblPlants:HORVU7Hr1G023750.1 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF25 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000B4747DE | SEG:seg |
Description
No Description!
Coordinates
chrchr7H:+:37255430..37258720
Molecular Weight (calculated)
102115.0 Da
IEP (calculated)
7.301
GRAVY (calculated)
-0.136
Length
925 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVAAGAMGP VIRKLGELLV RECNLKKRVK KGVKSLLTEL EIMHAVLRKV GEVPSDKLEE PVRIWAGKVR DLSCDMEDAV DDFMVRVDEG SSSKPTDMRS
101: RVKKFLKKTA TLFGKGKALH QICNAIEEAQ DLSKELADLH KKYELDMCST SNGATTDPRV LALHKHVGEL VGIEHTRDEL VKTLICEDRS PEEQLKTLSI
201: VGAGGLGKTT LTKAVYEKIK AQFDCAAFVP VGQKPDIPKV FKDLLYGLDK VKFKDIHNTT KGENLLIEDI TEFLVDKRYL IVIDDIWEED IWKYIECALY
301: KNKLQSRVIT TTRNVSVSEA CLNSTNGTIH RMRPLSDEDS QILFHRRIFQ SEEKCPEDFQ IVSRDILRKC GGVPLAIITI GSLLVSGHRI KQKDEWMHVH
401: NSMGRGVTQG GVVKDMKGIL SLSYYDLPPY LKPXXXXXXX XXXXXXXXXX XXIWRWLAEG FIQCDKKENR LFEIGESYFN ELLNRSLIQP AEINWEGTVV
501: TFRIHDMVLD LICSLSSEEN FISILDNDEW HAPNLQRKFR RLSLHNINAN VQNQQFDSTS LSKVRTFAVF SPVTCDWLPS LSSFQFLRVL DLGNCGSQES
601: SSGISLKYVG NLIHLRYLGL RNVDVQELPL DIGKLQLLQT LDIRGTRIQK LPASVVQLAN LMCLRINDDL VLPRGMGNLT SLEVLGRVRL SPSPHIAKEL
701: SHLTELRTFS INCVNMDGDL IDILIKSLGN LQKLHNLRID RSGSLIDCMR ESWVPPPHLR SFESWGFFEN AWFSILPKWV NSTSLPHLST LVIEVKELQG
801: DDLQIIGMLP ALRLLRLAAK HVMGTLVVRA DAFPSARYCM FWGFPTSPCL FPPGAIPRVQ YLVFCVSARS IASGEVDCSM GHFPSLEQVQ VDLLLENSSD
901: EEKGTAKTLL GRAAEAHPKR PTIEI
101: RVKKFLKKTA TLFGKGKALH QICNAIEEAQ DLSKELADLH KKYELDMCST SNGATTDPRV LALHKHVGEL VGIEHTRDEL VKTLICEDRS PEEQLKTLSI
201: VGAGGLGKTT LTKAVYEKIK AQFDCAAFVP VGQKPDIPKV FKDLLYGLDK VKFKDIHNTT KGENLLIEDI TEFLVDKRYL IVIDDIWEED IWKYIECALY
301: KNKLQSRVIT TTRNVSVSEA CLNSTNGTIH RMRPLSDEDS QILFHRRIFQ SEEKCPEDFQ IVSRDILRKC GGVPLAIITI GSLLVSGHRI KQKDEWMHVH
401: NSMGRGVTQG GVVKDMKGIL SLSYYDLPPY LKPXXXXXXX XXXXXXXXXX XXIWRWLAEG FIQCDKKENR LFEIGESYFN ELLNRSLIQP AEINWEGTVV
501: TFRIHDMVLD LICSLSSEEN FISILDNDEW HAPNLQRKFR RLSLHNINAN VQNQQFDSTS LSKVRTFAVF SPVTCDWLPS LSSFQFLRVL DLGNCGSQES
601: SSGISLKYVG NLIHLRYLGL RNVDVQELPL DIGKLQLLQT LDIRGTRIQK LPASVVQLAN LMCLRINDDL VLPRGMGNLT SLEVLGRVRL SPSPHIAKEL
701: SHLTELRTFS INCVNMDGDL IDILIKSLGN LQKLHNLRID RSGSLIDCMR ESWVPPPHLR SFESWGFFEN AWFSILPKWV NSTSLPHLST LVIEVKELQG
801: DDLQIIGMLP ALRLLRLAAK HVMGTLVVRA DAFPSARYCM FWGFPTSPCL FPPGAIPRVQ YLVFCVSARS IASGEVDCSM GHFPSLEQVQ VDLLLENSSD
901: EEKGTAKTLL GRAAEAHPKR PTIEI
0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
Arabidopsis Description
RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.