Factsheet for HORVU2Hr1G011300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G590900.1	Wheat	cytosol	52.1	80.5
HORVU2Hr1G040600.1	Barley	cytosol	71.52	76.74
TraesCS2B01G608800.2	Wheat	cytosol	72.28	74.78
HORVU5Hr1G068380.3	Barley	cytosol	51.78	52.23
Os11t0550500-01	Rice	cytosol	49.73	50.44
Zm00001d007457_P003	Maize	cytosol	50.49	49.47
Zm00001d036280_P002	Maize	cytosol	50.38	49.11
OQU83506	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	44.23	46.38
Zm00001d007456_P005	Maize	cytosol	34.09	43.59
HORVU2Hr1G004150.3	Barley	cytosol	25.67	42.42
HORVU1Hr1G012180.1	Barley	cytosol	13.16	42.36
HORVU1Hr1G004080.2	Barley	cytosol, extracellular, nucleus	32.36	42.13
HORVU2Hr1G004070.4	Barley	cytosol	26.0	41.99
HORVU7Hr1G023660.1	Barley	cytosol	9.71	38.96
HORVU7Hr1G023820.2	Barley	cytosol	26.11	37.69
HORVU1Hr1G012190.1	Barley	cytosol, plasma membrane	33.12	37.67
HORVU7Hr1G100280.2	Barley	cytosol	17.91	37.3
HORVU6Hr1G028220.1	Barley	cytosol, extracellular	31.61	35.09
HORVU2Hr1G012010.2	Barley	cytosol	40.35	34.57
HORVU5Hr1G085330.5	Barley	cytosol	37.65	34.52
HORVU7Hr1G095630.2	Barley	cytosol	34.52	34.41
HORVU2Hr1G122810.1	Barley	cytosol	35.28	34.31
HORVU5Hr1G085290.2	Barley	plasma membrane	36.79	34.2
HORVU1Hr1G004140.1	Barley	cytosol, plasma membrane	30.85	34.13
HORVU3Hr1G099360.5	Barley	cytosol	36.89	34.03
HORVU3Hr1G104770.2	Barley	cytosol, plasma membrane, plastid	33.66	33.95
HORVU7Hr1G023770.1	Barley	cytosol	33.76	33.84
HORVU7Hr1G000230.45	Barley	cytosol	29.88	32.74
HORVU7Hr1G023730.1	Barley	cytosol	32.36	32.36
HORVU7Hr1G023750.1	Barley	cytosol	31.82	31.89
HORVU7Hr1G121050.1	Barley	cytosol	24.16	31.86
HORVU3Hr1G014640.2	Barley	cytosol	19.63	31.22
HORVU3Hr1G014690.1	Barley	cytosol	19.2	30.69
HORVU3Hr1G014650.1	Barley	cytosol	19.2	30.69
HORVU7Hr1G100300.4	Barley	cytosol	27.4	29.92
HORVU3Hr1G105020.36	Barley	plasma membrane	16.29	29.78
HORVU7Hr1G121150.11	Barley	cytosol	24.16	29.75
HORVU7Hr1G100250.47	Barley	cytosol	32.04	28.78
HORVU6Hr1G002150.4	Barley	cytosol, golgi, nucleus	35.38	28.6
HORVU3Hr1G099740.7	Barley	cytosol	33.87	28.47
HORVU5Hr1G063690.7	Barley	cytosol	33.01	22.24
HORVU7Hr1G023650.1	Barley	cytosol, mitochondrion	7.34	19.71

Protein Annotations

Gene3D:3.10.20.90	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	InterPro:AUX/IAA_dom	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734
GO:GO:0009987	GO:GO:0043531	EnsemblPlantsGene:HORVU2Hr1G011300	EnsemblPlants:HORVU2Hr1G011300.1	InterPro:IPR000270	InterPro:IPR032675
InterPro:LRR_dom_sf	UniProt:M0W9C5	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:PB1_dom	PFAM:PF00931
PFAM:PF02309	PRINTS:PR00364	PFscan:PS51745	PANTHER:PTHR43889	PANTHER:PTHR43889:SF34	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	SUPFAM:SSF54277	UniParc:UPI000295FA73	SEG:seg	:

Description

Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:M0W9C5]

Coordinates

chrchr2H:-:22589198..22598326

Molecular Weight (calculated)

104885.0 Da

IEP (calculated)

7.949

GRAVY (calculated)

-0.151

Length

927 amino acids

Sequence
(BLAST)

001: MAAAVTGAMA TLLPKLADLI TKEYNLQRGV RGEIMFLKAE MESMQTALLK ISQAPIDQPP DIQVKLWAKA VRDLSYDLED NIDKFIVCIE THGQPDKSHN
101: FRGFIDKCLS LLTKGKIRHK IGIDIKDIKN RIKEVSERRD RHKVDSVAAA KPPGPTIEAL RLSALYAKAT DLVGTDKKSL AVVKMLMEGD EVSMKQLKVV
201: SIVGLGGLGK TTLANSVYEM LKVQFNIQQQ KLQLDCTPFS PKRKGCMAFV SVSLNPTMEK IFKSLLHQFD KHAYQNINEA SWGEAQLIGE IRTFLGDKRY
301: LIVIDDIWDK SVWENIKYAL PGNEHGSRVI VTTRILDVAQ QAGGVYLLKP LSVADSRKLF YQRIYETENK SPPNHLFEVS EKILDRCGGV PLAIITIGSL
401: LSSKKGRTQT HEYWSKVYKS MGSGLDNSHD DVKNMRRILS VSYSDLPPHL KTCLLHLSLY PEDYVIQTEH LIWKWVGEGF VEENPNKNLY EVGEDYLDEL
501: INKSLVQPVK FDNANKVRSC RVHDMVRDLI TSLSNEENFL TIVGGQQPLH QSSKIRRLSI QTSSEEVANQ LPSLSCVRSL TVSSPAFSLL PALSRFPVLR
601: VLDLTDCKQV DNSHWKDICS LFHLRYLSLK GTSITKIPKG IGNLQFLQVL DLRSTEIEEE LPSSFIQLTQ LLLVLMLHSI PCAVPRWMCS MSSLLSLSIT
701: LKTLGEEDLQ VLGSILCLSD LFIRVEKPTP GRDKRKVVDS GCPFVRLTRF SIKSDTMELR FAQGAMQSLQ TLLIFMLSDV RETLLQFGDF VLGLENLSSL
801: EHIHVNVRSD AKEMENVRNA VQKEIDMNQN NPKMTFPVIK VYKSGTYGRF LDVTKFSNYG ELRREVGRLF GLEGELEDPL RSSWKLVLMD REGDLLLVGD
901: VPWHEFVNVV SCIRILSPYE MEQMILY

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.