Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU77456 | Sorghum | cytosol | 68.32 | 72.5 |
| Os05t0240200-03 | Rice | cytosol | 63.58 | 64.04 |
| OQU84067 | Sorghum | cytosol | 14.23 | 44.42 |
| OQU83095 | Sorghum | cytosol | 30.73 | 43.09 |
| OQU88733 | Sorghum | cytosol | 8.98 | 42.86 |
| KXG28972 | Sorghum | cytosol | 28.03 | 42.24 |
| OQU83875 | Sorghum | vacuole | 26.13 | 41.87 |
| OQU84059 | Sorghum | cytosol | 28.1 | 41.85 |
| OQU84063 | Sorghum | cytosol | 27.59 | 41.27 |
| OQU84065 | Sorghum | cytosol | 21.31 | 40.9 |
| EES09021 | Sorghum | cytosol | 21.53 | 40.63 |
| OQU78620 | Sorghum | cytosol | 27.15 | 40.04 |
| EES08935 | Sorghum | cytosol | 27.96 | 38.8 |
| KXG28969 | Sorghum | endoplasmic reticulum, plasma membrane | 25.4 | 38.67 |
| EES10297 | Sorghum | cytosol | 27.45 | 38.29 |
| HORVU3Hr1G099740.7 | Barley | cytosol | 30.51 | 37.9 |
| OQU83886 | Sorghum | cytosol | 25.18 | 37.79 |
| KXG21016 | Sorghum | cytosol | 24.53 | 37.75 |
| KXG24016 | Sorghum | cytosol | 26.06 | 37.54 |
| EES09013 | Sorghum | cytosol | 25.04 | 37.24 |
| OQU84069 | Sorghum | cytosol | 24.82 | 36.72 |
| OQU84066 | Sorghum | cytosol | 24.67 | 36.5 |
| KXG34720 | Sorghum | cytosol | 14.89 | 35.11 |
| OQU83506 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 22.41 | 34.73 |
| OQU83293 | Sorghum | extracellular, plasma membrane | 23.28 | 34.6 |
| OQU84064 | Sorghum | cytosol | 18.69 | 34.41 |
| KXG20043 | Sorghum | cytosol | 23.36 | 33.93 |
| KXG22895 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 27.81 | 32.84 |
| KXG28412 | Sorghum | cytosol | 25.47 | 32.37 |
| OQU84068 | Sorghum | golgi, plasma membrane, vacuole | 16.06 | 31.79 |
| KXG34721 | Sorghum | cytosol, nucleus, peroxisome | 13.07 | 31.08 |
Protein Annotations
| Gene3D:2.130.10.10 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:C5Z0I1 | ncoils:Coil |
| EnsemblPlants:EES19053 | ProteinID:EES19053 | ProteinID:EES19053.2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF33 | InterPro:RX-like_CC | SMART:SM00320 | EnsemblPlantsGene:SORBI_3009G049500 | SUPFAM:SSF50978 | SUPFAM:SSF52047 |
| SUPFAM:SSF52540 | UniParc:UPI00081AE367 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:4911215..4920770
Molecular Weight (calculated)
153907.0 Da
IEP (calculated)
6.750
GRAVY (calculated)
-0.091
Length
1370 amino acids
Sequence
(BLAST)
(BLAST)
0001: MELVTGAMGS LLPKLGELLK EEYGLQKGVK KKIKTLSREL EAAHAVLREM SGMPADQLNE VVKLWARDVR EASYDMEDII DTFLVHVDDS PERPADPHML
0101: RRFRRKVTAL FKKSKARRGI SNQIQEIYKK LEELTARRER YRTVDSVVNT KAATTIDPRI LNLYKSATEL VGIEGPRDEL INMLSVLEDD DGDVCDHKKM
0201: KIVSVVGFGG LGKTTLAKAV YDQLKPHFKW GAFIPVGRNP DIKKVFRDIL IGLDKEKFMN FNMTMLDVRQ LMDELKEFVK EKRCFIVIDD IWDEDSWKLF
0301: RCAMQESNYG SRFIITTRIS TVARHADEVY KIQPLSCDNS EKLLFARISD SEGKYLGSPS VETCERILKK CSGVPLAIIT IASLLASKPV EDWSEVYNSI
0401: GFGHKGNDDV DNTIKILSFS YYDLPSHLKT CLLYLSVFPE DHVIQKNSLI WMWIAEGFIS EEQAATARVG LFELGERYFN ELINRNMIHP LEGYAGYVDA
0501: CSVHDMVLDL IHQLSSEENF VTVLSGGERQ KLQGRISRRV ALQCVKDHNV GQLADVPMEK VRSIFASQCR FRSLCPRLPF LRVVEMVECS VPEYYGKDVL
0601: YHLESLIHLR YFRLVRPYSP VELPREVRHL RFLQTLDLQK CFIMKLPEEV GLLTQLLCLR ASWETRVPAG LIGKLTSLQE LRIGCENEDA AMQFAKELGL
0701: LKELRVLQAL IDIDVSSKSI GCALLESLGH LHNIQELQIS EPTLRLKRNK YVGLVGAVDS DAGWVSCRHL RVLSLDCFVF SALPKWIKSS LAPNLTYLNV
0801: VVVDMKEQDM ETLAKLPELS CLILYSYSDT KSVVVSIKAR ADEDGVGYFR KLRFLRIFGP CIWFDLRGGG ECSRVASSSS NNNAIMPSLE SLEFVVHVRS
0901: LKDEKLHLGF DKLLGFQSLG TSSLHRVIVE VNCRGASTRE VEEAEAALNH AATVHPKHPT LRSYRVQERH MLSRYQEACM EMSRASELVI KAWKLADIVG
1001: SEHIQILRMP DPEASPSKVM CLLYTDNGLA LLALGSNTVH KVWKWEHSGK NPRGKPSKLV PPVLWQPENG ILMTNDTPID GNVPEEATAC TALSQDDYYL
1101: ISASGGKVSM FYMRTFEVMI TFMAPPPAAT FLACHPRDIN TIAIGTEDSS IQIYNVYINK VETVITGHHK KITGLAFSLS MAVLVSSGAD AQLCVWSIDG
1201: WEKKKSRYIK HPSSSGALVG DTMVQFHYDE MHFLVVHESQ LAIYDCQLEC LCSWFPRDAL PAPISSAVYS FGCVLVFAGF CDGAIGIFEA KSLTFRCRIA
1301: PSAYIPSLIS SGGEIVYPTV VTAHPWKPNQ IAVGMSDGAV YVLEPLDTDD RQVGSDTSSE QCPPSNVSSS
0101: RRFRRKVTAL FKKSKARRGI SNQIQEIYKK LEELTARRER YRTVDSVVNT KAATTIDPRI LNLYKSATEL VGIEGPRDEL INMLSVLEDD DGDVCDHKKM
0201: KIVSVVGFGG LGKTTLAKAV YDQLKPHFKW GAFIPVGRNP DIKKVFRDIL IGLDKEKFMN FNMTMLDVRQ LMDELKEFVK EKRCFIVIDD IWDEDSWKLF
0301: RCAMQESNYG SRFIITTRIS TVARHADEVY KIQPLSCDNS EKLLFARISD SEGKYLGSPS VETCERILKK CSGVPLAIIT IASLLASKPV EDWSEVYNSI
0401: GFGHKGNDDV DNTIKILSFS YYDLPSHLKT CLLYLSVFPE DHVIQKNSLI WMWIAEGFIS EEQAATARVG LFELGERYFN ELINRNMIHP LEGYAGYVDA
0501: CSVHDMVLDL IHQLSSEENF VTVLSGGERQ KLQGRISRRV ALQCVKDHNV GQLADVPMEK VRSIFASQCR FRSLCPRLPF LRVVEMVECS VPEYYGKDVL
0601: YHLESLIHLR YFRLVRPYSP VELPREVRHL RFLQTLDLQK CFIMKLPEEV GLLTQLLCLR ASWETRVPAG LIGKLTSLQE LRIGCENEDA AMQFAKELGL
0701: LKELRVLQAL IDIDVSSKSI GCALLESLGH LHNIQELQIS EPTLRLKRNK YVGLVGAVDS DAGWVSCRHL RVLSLDCFVF SALPKWIKSS LAPNLTYLNV
0801: VVVDMKEQDM ETLAKLPELS CLILYSYSDT KSVVVSIKAR ADEDGVGYFR KLRFLRIFGP CIWFDLRGGG ECSRVASSSS NNNAIMPSLE SLEFVVHVRS
0901: LKDEKLHLGF DKLLGFQSLG TSSLHRVIVE VNCRGASTRE VEEAEAALNH AATVHPKHPT LRSYRVQERH MLSRYQEACM EMSRASELVI KAWKLADIVG
1001: SEHIQILRMP DPEASPSKVM CLLYTDNGLA LLALGSNTVH KVWKWEHSGK NPRGKPSKLV PPVLWQPENG ILMTNDTPID GNVPEEATAC TALSQDDYYL
1101: ISASGGKVSM FYMRTFEVMI TFMAPPPAAT FLACHPRDIN TIAIGTEDSS IQIYNVYINK VETVITGHHK KITGLAFSLS MAVLVSSGAD AQLCVWSIDG
1201: WEKKKSRYIK HPSSSGALVG DTMVQFHYDE MHFLVVHESQ LAIYDCQLEC LCSWFPRDAL PAPISSAVYS FGCVLVFAGF CDGAIGIFEA KSLTFRCRIA
1301: PSAYIPSLIS SGGEIVYPTV VTAHPWKPNQ IAVGMSDGAV YVLEPLDTDD RQVGSDTSSE QCPPSNVSSS
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
Arabidopsis Description
TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.