CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84067	Sorghum	cytosol	57.42	93.39
EES09021	Sorghum	cytosol	92.44	90.91
OQU84066	Sorghum	cytosol	99.16	76.46
OQU84069	Sorghum	cytosol	96.64	74.51
EES09013	Sorghum	cytosol	79.83	61.89
OQU84064	Sorghum	cytosol	57.0	54.7
TraesCS3D01G021900.1	Wheat	cytosol	37.82	53.15
TraesCS3D01G460000.1	Wheat	cytosol	42.3	51.36
OQU84068	Sorghum	golgi, plasma membrane, vacuole	48.32	49.86
OQU88733	Sorghum	cytosol	19.47	48.43
Os09t0357400-00	Rice	mitochondrion, plastid	32.35	47.34
OQU84063	Sorghum	cytosol	56.44	44.0
OQU84059	Sorghum	cytosol	54.06	41.96
KXG34720	Sorghum	cytosol	30.25	37.18
KXG28969	Sorghum	endoplasmic reticulum, plasma membrane	44.54	35.33
HORVU3Hr1G099360.5	Barley	cytosol	49.3	35.02
KXG28972	Sorghum	cytosol	44.54	34.98
OQU83886	Sorghum	cytosol	44.68	34.94
KXG24016	Sorghum	cytosol	45.52	34.17
OQU78620	Sorghum	cytosol	43.7	33.58
OQU83875	Sorghum	vacuole	40.06	33.45
OQU83506	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	39.64	32.01
TraesCS1D01G006800.1	Wheat	cytosol	42.86	31.68
OQU83095	Sorghum	cytosol	43.28	31.63
OQU83293	Sorghum	extracellular, plasma membrane	39.92	30.91
EES10297	Sorghum	cytosol	42.16	30.65
EES08935	Sorghum	cytosol	42.02	30.4
KXG21016	Sorghum	cytosol	36.97	29.66
KXG28412	Sorghum	cytosol	42.02	27.83
KXG20043	Sorghum	cytosol	35.57	26.94
KXG22895	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	39.36	24.22
KXG34721	Sorghum	cytosol, nucleus, peroxisome	18.63	23.09
EES19053	Sorghum	cytosol	40.9	21.31
Zm00001d037650_P002	Maize	extracellular, plasma membrane	44.68	19.21
OQU77456	Sorghum	cytosol	34.03	18.82

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1Z5RKS5	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
EnsemblPlants:OQU84065	ProteinID:OQU84065	ProteinID:OQU84065.1	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR43889	PANTHER:PTHR43889:SF25	InterPro:RX-like_CC	EnsemblPlantsGene:SORBI_3005G223600	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI000B8BA9D4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:71003943..71008982

Molecular Weight (calculated)

80918.0 Da

IEP (calculated)

6.998

GRAVY (calculated)

-0.228

Length

714 amino acids

Sequence
(BLAST)

001: MEFATGALGT LLPKLGQLLQ DEYNLQKGVK KDIQFVRKEL ESMHAALRDV GEVPQEQLKE VIRIWARDVR ELSYDMEDIV DTFLVRVQGS EPPSKRSVKR
101: FVKKMTSIVS NAKTRHDIGQ EIKDIKERVK DVAERRDRYK VDAITPTKTS VDPRITALYT KAASLVGIDK PREELISMLT KEDGGESSVE ERIVSIVGFG
201: GLGKTTLARA VYDKIKQQYN CTAFVSVSRD PDIIKILKDL LYELDRNEYM GIHNTALGQH HLTDLVQEFL KNKRYLIVID DIWDTKPWEM IRCALPENGK
301: KSGVLTTTRI TDVAEHVGGC YRMKLLTQES SKILFYGRIF GSIDKCPPQF SDVSENLLKK CGGVPLAIVT TSSLLANKSR NVNEWQDVCD SIGSGLRNNP
401: GMDSMRKILL LSYYDLTPQL KTCLLYLSIF PEDYQINKQR LIERWIAEGF VQQGDGRQSL HEIGQSYFNE LLNRSLIQPA DMDDDEMNPF SCQVHDMVLD
501: LICSLSRDEC FAATLNGDCK EITSSLGSKA RRLSIYNTTW PTINMSTLRS LTICSYALIN SMPPLSSFYL LRVLDLEDCN LSDHSSIEFV GKLLHMRYLS
601: LAGTGYAGDI PREIGKLLFL QSFRFDGTDI KVVPLSFFGL RQLMSLRVGD STRLPTTSGL RNLSSLELLQ INVDSTYIAE QLGYLTQLRA LMVMLIKDKE
701: GRWDESMCRV LVRC

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.