Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84068 | Sorghum | golgi, plasma membrane, vacuole | 88.58 | 95.23 |
| EES09013 | Sorghum | cytosol | 99.87 | 80.67 |
| OQU84069 | Sorghum | cytosol | 73.92 | 59.4 |
| OQU84066 | Sorghum | cytosol | 73.79 | 59.29 |
| OQU84065 | Sorghum | cytosol | 54.7 | 57.0 |
| EES09021 | Sorghum | cytosol | 55.24 | 56.61 |
| Os09t0357400-00 | Rice | mitochondrion, plastid | 29.7 | 45.29 |
| OQU84067 | Sorghum | cytosol | 26.21 | 44.42 |
| OQU84059 | Sorghum | cytosol | 53.23 | 43.04 |
| OQU84063 | Sorghum | cytosol | 52.69 | 42.79 |
| TraesCS3D01G460000.1 | Wheat | cytosol | 27.42 | 34.69 |
| TraesCS3D01G021900.1 | Wheat | cytosol | 22.85 | 33.46 |
| OQU83886 | Sorghum | cytosol | 39.38 | 32.09 |
| HORVU3Hr1G099360.5 | Barley | cytosol | 42.61 | 31.54 |
| KXG28969 | Sorghum | endoplasmic reticulum, plasma membrane | 38.04 | 31.44 |
| KXG28972 | Sorghum | cytosol | 38.17 | 31.24 |
| OQU78620 | Sorghum | cytosol | 38.71 | 31.0 |
| KXG34720 | Sorghum | cytosol | 23.79 | 30.46 |
| KXG34721 | Sorghum | cytosol, nucleus, peroxisome | 23.39 | 30.21 |
| OQU83875 | Sorghum | vacuole | 34.14 | 29.71 |
| KXG24016 | Sorghum | cytosol | 37.77 | 29.55 |
| TraesCS1D01G006800.1 | Wheat | cytosol | 36.29 | 27.95 |
| OQU83095 | Sorghum | cytosol | 36.29 | 27.64 |
| OQU83506 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 32.53 | 27.38 |
| KXG21016 | Sorghum | cytosol | 32.66 | 27.3 |
| KXG20043 | Sorghum | cytosol | 34.54 | 27.25 |
| EES10297 | Sorghum | cytosol | 34.54 | 26.17 |
| OQU83293 | Sorghum | extracellular, plasma membrane | 32.39 | 26.14 |
| EES08935 | Sorghum | cytosol | 34.54 | 26.04 |
| KXG28412 | Sorghum | cytosol | 35.08 | 24.21 |
| KXG22895 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 34.41 | 22.07 |
| OQU77456 | Sorghum | cytosol | 34.68 | 19.98 |
| EES19053 | Sorghum | cytosol | 34.41 | 18.69 |
| OQU88733 | Sorghum | cytosol | 6.85 | 17.77 |
| Zm00001d037650_P002 | Maize | extracellular, plasma membrane | 36.56 | 16.38 |
Protein Annotations
| EnsemblPlants:OQU84064 | EnsemblPlantsGene:SORBI_3005G223450 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR43889 | PANTHER:PTHR43889:SF25 | PFAM:PF00931 | PRINTS:PR00364 | ProteinID:OQU84064 | ProteinID:OQU84064.1 |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000B8BAC45 | UniProt:A0A1Z5RK09 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr5:+:70988835..70999458
Molecular Weight (calculated)
84333.5 Da
IEP (calculated)
7.154
GRAVY (calculated)
-0.053
Length
744 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTKEDGGRS SAEQWIVSIV GFGGLGKTTL AKAVYDKIKP QFDCTAFISV SRDPDIIKIF KDMLYELDNK EYWDIHNIAL GQHYLTDLVH EFLKNKRYLI
101: VIDDIWDTKP WEMIRCALPE NGQKSRVLTT TRIIDVAEHV GGCYRMKHLT DKSSKIIFYG RIFGSIGNCP QQFSDISEKV LKKCGGVPLA IVTISSLLAN
201: KTRSINEWSN VCDAIGAGVG NNPGMDNMRK ILLLSYYDLT PQLKTCLLYL SIFPEDYEFR KTTLILRWIA EGFVQLEDGR QSLFEVGQSY YHELLNRCLI
301: QPGDSEGDDL SPLRCRVHDM VLDLICSLSR DESFATTVYG DCRQITSSEN KVRRLSIHNA SWPTMNMSKL RSLTISNSAI INSMPPFLCY HLLRVLDFEK
401: CNLKDHTSLE FLCKLFHLRF LSLVDTGYAG EVPREIGNLQ FLQTFYFSGT YIKQVPLSIL GMRQLMCLAV GMNTRLPTSG LRNLSSLELL RMNVDSAYIA
501: EELGHLTQLR VLMVVLRKDK EGRWDERICR VLVGSLSKLH KIQTLQVEIS DDVEVHLEGS VDSPWNLSHL VIFGTSRLPT WIDHTSFQLL SQLCIKVGQV
601: GREDIHVLGR LKALRVLHLG MVGAKQVFER FMISADAFPC VTRCVFSGFS TVPSMFPPGA MPSLQRFCFD IRLEDFGDDS GFTVDDLALC HLPSLQRVWV
701: CLDGERARDI KDVAMKALTK EAHAHPNHPD IDVGINGQWS QLCR
101: VIDDIWDTKP WEMIRCALPE NGQKSRVLTT TRIIDVAEHV GGCYRMKHLT DKSSKIIFYG RIFGSIGNCP QQFSDISEKV LKKCGGVPLA IVTISSLLAN
201: KTRSINEWSN VCDAIGAGVG NNPGMDNMRK ILLLSYYDLT PQLKTCLLYL SIFPEDYEFR KTTLILRWIA EGFVQLEDGR QSLFEVGQSY YHELLNRCLI
301: QPGDSEGDDL SPLRCRVHDM VLDLICSLSR DESFATTVYG DCRQITSSEN KVRRLSIHNA SWPTMNMSKL RSLTISNSAI INSMPPFLCY HLLRVLDFEK
401: CNLKDHTSLE FLCKLFHLRF LSLVDTGYAG EVPREIGNLQ FLQTFYFSGT YIKQVPLSIL GMRQLMCLAV GMNTRLPTSG LRNLSSLELL RMNVDSAYIA
501: EELGHLTQLR VLMVVLRKDK EGRWDERICR VLVGSLSKLH KIQTLQVEIS DDVEVHLEGS VDSPWNLSHL VIFGTSRLPT WIDHTSFQLL SQLCIKVGQV
601: GREDIHVLGR LKALRVLHLG MVGAKQVFER FMISADAFPC VTRCVFSGFS TVPSMFPPGA MPSLQRFCFD IRLEDFGDDS GFTVDDLALC HLPSLQRVWV
701: CLDGERARDI KDVAMKALTK EAHAHPNHPD IDVGINGQWS QLCR
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.