Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G219000.1 | Wheat | cytosol, peroxisome, plastid | 58.82 | 69.57 |
| TraesCS2B01G244400.1 | Wheat | cytosol, peroxisome, plastid | 58.82 | 69.57 |
| TraesCS2D01G224400.1 | Wheat | cytosol, peroxisome, plastid | 58.82 | 69.57 |
| HORVU2Hr1G045250.6 | Barley | cytosol, peroxisome, plastid | 58.09 | 66.39 |
| Zm00001d038594_P002 | Maize | cytosol, peroxisome, plastid | 55.15 | 63.56 |
| Zm00001d043217_P002 | Maize | cytosol, golgi, peroxisome | 55.15 | 47.17 |
| Zm00001d004854_P001 | Maize | extracellular | 22.06 | 42.25 |
| Zm00001d007787_P001 | Maize | mitochondrion | 22.79 | 24.8 |
Protein Annotations
| MapMan:17.4.1.1.1 | Gene3D:3.30.780.10 | UniProt:A0A1D6LI19 | ProteinID:AQK79506.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR001950 |
| PFAM:PF01253 | PFscan:PS50296 | PANTHER:PTHR10388 | PANTHER:PTHR10388:SF35 | SUPFAM:SSF55159 | InterPro:SUI1 |
| InterPro:SUI1_dom_sf | InterPro:SUI1_euk | UniParc:UPI000843666F | EnsemblPlantsGene:Zm00001d035710 | EnsemblPlants:Zm00001d035710_P001 | EnsemblPlants:Zm00001d035710_T001 |
Description
Protein translation factor SUI1-like protein
Coordinates
chr6:+:41945282..41946535
Molecular Weight (calculated)
15509.4 Da
IEP (calculated)
8.455
GRAVY (calculated)
-0.534
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSKSPKDL PHLNSETVRA KGSHYSIYVF RFYNTILATL TNQVFMSDLD IQIPTAFDPF AEANARDSGA AAGSKDYVHV RIQQRNGRKS LTTVQGLKKE
101: FSYSKILKDL KKEFCCNGTV VQDPELGQCY FYERMH
101: FSYSKILKDL KKEFCCNGTV VQDPELGQCY FYERMH
001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF
101: GLVKKDNIKI HGF
Arabidopsis Description
Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.