Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0151501-00 | Rice | cytosol, peroxisome | 42.25 | 52.63 |
| HORVU4Hr1G010890.1 | Barley | cytosol, peroxisome | 40.85 | 49.15 |
| Zm00001d007787_P001 | Maize | mitochondrion | 61.97 | 35.2 |
| Zm00001d038594_P002 | Maize | cytosol, peroxisome, plastid | 53.52 | 32.2 |
| Solyc07g064620.1.1 | Tomato | cytosol | 46.48 | 29.46 |
| VIT_19s0090g00420.t01 | Wine grape | cytosol, nucleus, peroxisome | 45.07 | 28.57 |
| KRH14395 | Soybean | cytosol | 45.07 | 28.07 |
| KRH73751 | Soybean | cytosol | 45.07 | 28.07 |
| AT5G54940.3 | Thale cress | cytosol, nucleus, peroxisome | 42.25 | 26.79 |
| Bra029001.1-P | Field mustard | cytosol | 42.25 | 26.79 |
| CDY43020 | Canola | cytoskeleton, cytosol, peroxisome | 42.25 | 26.79 |
| KRG98759 | Soybean | cytosol | 47.89 | 24.11 |
| Zm00001d043217_P002 | Maize | cytosol, golgi, peroxisome | 53.52 | 23.9 |
| PGSC0003DMT400057195 | Potato | cytosol | 46.48 | 23.08 |
| PGSC0003DMT400091273 | Potato | cytosol | 42.25 | 22.73 |
| Zm00001d035710_P001 | Maize | cytosol, nucleus, peroxisome | 42.25 | 22.06 |
| Solyc10g006280.1.1 | Tomato | cytosol | 38.03 | 21.95 |
| KRH46184 | Soybean | vacuole | 46.48 | 21.02 |
| CDY52575 | Canola | cytosol, peroxisome | 42.25 | 18.99 |
| CDY17292 | Canola | cytosol | 42.25 | 12.93 |
| Bra002944.1-P | Field mustard | cytosol | 42.25 | 12.93 |
| CDY19877 | Canola | cytosol | 4.23 | 4.41 |
Protein Annotations
| MapMan:17.4.1.1.1 | Gene3D:3.30.780.10 | UniProt:A0A1D6EHS9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003743 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR001950 | ProteinID:ONM19681.1 |
| PFAM:PF01253 | PFscan:PS50296 | PANTHER:PTHR10388 | PANTHER:PTHR10388:SF35 | SUPFAM:SSF55159 | InterPro:SUI1 |
| InterPro:SUI1_dom_sf | UniParc:UPI000844951C | EnsemblPlantsGene:Zm00001d004854 | EnsemblPlants:Zm00001d004854_P001 | EnsemblPlants:Zm00001d004854_T001 | : |
Description
Protein translation factor SUI1 homolog
Coordinates
chr2:-:144678030..144679289
Molecular Weight (calculated)
7668.5 Da
IEP (calculated)
8.213
GRAVY (calculated)
0.163
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MALGVLMGGL VKAADSVSSL TTVLGLNKEF SYNKNLIDLK KEFCCNGTVV QDPELGLVIQ IQSDRRKNGL L
001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF
101: GLVKKDNIKI HGF
Arabidopsis Description
Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.