CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002944.1-P	Field mustard	cytosol	100.0	100.0
CDY19877	Canola	cytosol	29.31	100.0
CDY43020	Canola	cytoskeleton, cytosol, peroxisome	45.26	93.75
AT5G54940.3	Thale cress	cytosol, nucleus, peroxisome	43.97	91.07
VIT_19s0090g00420.t01	Wine grape	cytosol, nucleus, peroxisome	39.66	82.14
Solyc07g064620.1.1	Tomato	cytosol	39.22	81.25
KRH73751	Soybean	cytosol	38.36	78.07
KRH14395	Soybean	cytosol	38.36	78.07
CDY52575	Canola	cytosol, peroxisome	47.41	69.62
PGSC0003DMT400057195	Potato	cytosol	39.66	64.34
KRH46184	Soybean	vacuole	41.38	61.15
CDY14282	Canola	cytosol, peroxisome, plastid	29.74	61.06
CDX97378	Canola	cytosol, peroxisome, plastid	29.74	61.06
CDY08224	Canola	cytosol, peroxisome, plastid	28.88	58.26
CDY02466	Canola	cytosol, peroxisome, plastid	28.88	57.76
CDY10602	Canola	cytosol, peroxisome, plastid	28.88	57.76
CDY26128	Canola	cytosol, peroxisome, plastid	28.45	57.39
CDY08222	Canola	cytosol, peroxisome, plastid	28.45	57.39
PGSC0003DMT400091273	Potato	cytosol	31.47	55.3
Solyc10g006280.1.1	Tomato	cytosol	28.45	53.66
KRG98759	Soybean	cytosol	31.9	52.48
Os02t0151501-00	Rice	cytosol, peroxisome	11.64	47.37
CDY08751	Canola	cytosol, peroxisome, plastid	19.4	45.45
Zm00001d004854_P001	Maize	extracellular	12.93	42.25
CDY46663	Canola	plastid	32.76	38.78
CDX92777	Canola	mitochondrion	31.9	36.45
CDY33072	Canola	nucleus	19.4	33.83
Zm00001d007787_P001	Maize	mitochondrion	13.36	24.8

Protein Annotations

KEGG:00290+4.2.1.33	MapMan:17.4.1.1.1	Gene3D:3.30.499.10	Gene3D:3.30.780.10	GO:A0A078FX26	UniProt:A0A078FX26
InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Aconitase_4Fe-4S_dom	EnsemblPlants:CDY17292	ProteinID:CDY17292	ProteinID:CDY17292.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0006412	GO:GO:0006413
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00095380001	InterPro:IPR001950	InterPro:IPR015931	PFAM:PF01253	PFscan:PS50296	PANTHER:PTHR10388
PANTHER:PTHR10388:SF36	SUPFAM:SSF53732	SUPFAM:SSF55159	InterPro:SUI1	InterPro:SUI1_dom_sf	InterPro:SUI1_euk
TIGRFAMs:TIGR01160	UniPathway:UPA00048	UniParc:UPI0002544293	:	:	:

Description

BnaA10g09260DBnaA10g09260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FX26]

Coordinates

chrLK032072:-:85420..88899

Molecular Weight (calculated)

26628.2 Da

IEP (calculated)

10.212

GRAVY (calculated)

-0.569

Length

232 amino acids

Sequence
(BLAST)

001: MRDALKSLGH DPNKINPRVL VDLLFDHSDQ VYGAKPEIWG KGMQLESDRN WERFMFLKWG SSAFYNMFIN KARVLALRIR SGSVSNGYTH PHGGSSARVN
101: LMHLQYKGMR ENPKRAFQVY MVELDIQVPL AYDPFAEAQD TDAPGTKEYI HVRIQQRNGK KSLTTVQGLK KEYSYEKILK DLKKDFCCNG NVVQDKVLGK
201: IIQLQGDQRK KVSHFLVQTG IAKKDQIKIH GF

Best Arabidopsis Sequence Match ( AT5G54940.1 )
(BLAST)

001: MVELDIQIPS AYDPFAEAKD SDAPGAKENI HIRIQQRNGK KSLTTVQGLK KEYSYERILK DLKKDFCCNG NVVQDKELGK IIQLQGDQRK KVSQFLVQTG
101: IAKKDQIKIH GF

Arabidopsis Description

AT5g54940/MBG8_21 [Source:UniProtKB/TrEMBL;Acc:Q9FFT6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.