Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004854_P001 | Maize | extracellular | 35.2 | 61.97 |
| Os02t0151501-00 | Rice | cytosol, peroxisome | 24.8 | 54.39 |
| HORVU4Hr1G010890.1 | Barley | cytosol, peroxisome | 24.0 | 50.85 |
| Zm00001d038594_P002 | Maize | cytosol, peroxisome, plastid | 30.4 | 32.2 |
| Solyc07g064620.1.1 | Tomato | cytosol | 27.2 | 30.36 |
| KRH14395 | Soybean | cytosol | 25.6 | 28.07 |
| VIT_19s0090g00420.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.8 | 27.68 |
| KRH73751 | Soybean | cytosol | 24.8 | 27.19 |
| Bra029001.1-P | Field mustard | cytosol | 24.0 | 26.79 |
| CDY43020 | Canola | cytoskeleton, cytosol, peroxisome | 24.0 | 26.79 |
| AT5G54940.3 | Thale cress | cytosol, nucleus, peroxisome | 23.2 | 25.89 |
| KRG98759 | Soybean | cytosol | 28.8 | 25.53 |
| PGSC0003DMT400057195 | Potato | cytosol | 28.0 | 24.48 |
| PGSC0003DMT400091273 | Potato | cytosol | 25.6 | 24.24 |
| Solyc10g006280.1.1 | Tomato | cytosol | 23.2 | 23.58 |
| Zm00001d043217_P002 | Maize | cytosol, golgi, peroxisome | 29.6 | 23.27 |
| KRH46184 | Soybean | vacuole | 28.8 | 22.93 |
| Zm00001d035710_P001 | Maize | cytosol, nucleus, peroxisome | 24.8 | 22.79 |
| CDY52575 | Canola | cytosol, peroxisome | 26.4 | 20.89 |
| CDY17292 | Canola | cytosol | 24.8 | 13.36 |
| Bra002944.1-P | Field mustard | cytosol | 24.8 | 13.36 |
| CDY19877 | Canola | cytosol | 0.8 | 1.47 |
Protein Annotations
| MapMan:17.4.1.1.1 | Gene3D:3.30.780.10 | UniProt:A0A1D6F8V8 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003743 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR001950 | ProteinID:ONM27591.1 |
| PFAM:PF01253 | PFscan:PS50296 | PANTHER:PTHR10388 | PANTHER:PTHR10388:SF35 | SUPFAM:SSF55159 | InterPro:SUI1 |
| InterPro:SUI1_dom_sf | UniParc:UPI0002210C7B | EnsemblPlantsGene:Zm00001d007787 | EnsemblPlants:Zm00001d007787_P001 | EnsemblPlants:Zm00001d007787_T001 | : |
Description
Protein translation factor SUI1 homolog
Coordinates
chr2:+:239644818..239646150
Molecular Weight (calculated)
14252.6 Da
IEP (calculated)
4.530
GRAVY (calculated)
-0.979
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQRAKGLRV WRDTNRLASR LYNFKRDTEP LVSLSEEQSN DLTDGDKNQE ANCSNVDDMY HGLTVNSEID SLPDPKDQGL NKEFSYNKNL IDLKKEFCCN
101: GTVVQDPELG PAIQLQSDQR KNGLM
101: GTVVQDPELG PAIQLQSDQR KNGLM
001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF
101: GLVKKDNIKI HGF
Arabidopsis Description
Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.